BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010266
         (1204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855...   288   1e-75
emb|CBI40929.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_002326480.1| light harvesting-like protein 3 [Populus tri...   277   4e-72
ref|XP_002524363.1| transcription factor, putative [Ricinus comm...   276   1e-71
ref|XP_002329601.1| light harvesting-like protein 3 [Populus tri...   274   4e-71

>ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera]
          Length = 251

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/230 (63%), Positives = 167/230 (72%), Gaps = 2/230 (0%)
 Frame = -2

Query: 1041 STKPHYLQRPYLSSLCKKKDLIFLSIKAT--GDGTMGSAVTVQEKKEGASEVKAEKKEAS 868
            S KP++  +P L    KK  L+ LS KAT  G GT  SA TV+ +K   +E KA +    
Sbjct: 18   SPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEK---AEEKAPEAAVL 74

Query: 867  NGXXXXXXXXXXXXXXXKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNP 688
            +                KF D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DNP
Sbjct: 75   DSQPNGAAAAGDVVLVTKFEDLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNP 134

Query: 687  ESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 508
            ESS+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM
Sbjct: 135  ESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 194

Query: 507  GNFFCKTXXXXXXXXXXXVRKNEDVENLKNLLQETTLYDKQWQATWKDET 358
            GNFFCKT           +RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 195  GNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 244


>emb|CBI40929.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/230 (62%), Positives = 164/230 (71%), Gaps = 2/230 (0%)
 Frame = -2

Query: 1041 STKPHYLQRPYLSSLCKKKDLIFLSIKAT--GDGTMGSAVTVQEKKEGASEVKAEKKEAS 868
            S KP++  +P L    KK  L+ LS KAT  G GT  SA TV+ +K   +E KA +    
Sbjct: 16   SPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEK---AEEKAPEA--- 69

Query: 867  NGXXXXXXXXXXXXXXXKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNP 688
                                D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DNP
Sbjct: 70   -------------------ADLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNP 110

Query: 687  ESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 508
            ESS+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM
Sbjct: 111  ESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 170

Query: 507  GNFFCKTXXXXXXXXXXXVRKNEDVENLKNLLQETTLYDKQWQATWKDET 358
            GNFFCKT           +RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 171  GNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 220


>ref|XP_002326480.1| light harvesting-like protein 3 [Populus trichocarpa]
            gi|118482026|gb|ABK92944.1| unknown [Populus trichocarpa]
            gi|222833802|gb|EEE72279.1| light harvesting-like protein
            3 [Populus trichocarpa]
          Length = 257

 Score =  277 bits (708), Expect = 4e-72
 Identities = 142/240 (59%), Positives = 168/240 (70%), Gaps = 9/240 (3%)
 Frame = -2

Query: 1047 NFSTKPHYLQRPYLSSLCKKKDLIFLSIKATGD----GTMGSAVTVQEKK-----EGASE 895
            +FS+K H + +P LS        +  + KA+ D    G   S+ TV+E K       +SE
Sbjct: 14   SFSSKHHIIFKPTLSLRPTSPPFLLSTSKASTDDGGAGVSASSATVEEPKLEQKAPDSSE 73

Query: 894  VKAEKKEASNGXXXXXXXXXXXXXXXKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVR 715
                 ++ SNG                F DPRWI GTWDLKQF KDGKT+WDAVIDAEVR
Sbjct: 74   SVPVAEKNSNGAVAPGGGVEVEVSK--FEDPRWISGTWDLKQFEKDGKTDWDAVIDAEVR 131

Query: 714  RRKWLQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSL 535
            RRKWL+ NPESS+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSL
Sbjct: 132  RRKWLEGNPESSSNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMIGFFMAYLVDSL 191

Query: 534  TGVGLVDQMGNFFCKTXXXXXXXXXXXVRKNEDVENLKNLLQETTLYDKQWQATWKDETT 355
            TGVG+VDQMGNFFCKT           +RKNED+E +K LL+ETT YD+QWQATW+DET+
Sbjct: 192  TGVGVVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETIKTLLEETTFYDRQWQATWQDETS 251


>ref|XP_002524363.1| transcription factor, putative [Ricinus communis]
            gi|223536324|gb|EEF37974.1| transcription factor,
            putative [Ricinus communis]
          Length = 259

 Score =  276 bits (705), Expect = 1e-71
 Identities = 141/239 (58%), Positives = 160/239 (66%), Gaps = 9/239 (3%)
 Frame = -2

Query: 1047 NFSTKPHYLQRPYLSSLCKKKDLIFLSIKATGD---GTMGSAVTVQEKKEGA------SE 895
            + S+KPH L +P           +F + KA+ D   G   +A  V+E KE        S 
Sbjct: 18   SLSSKPHLLTKPTSFLTPINPPFLFSAPKASTDNGAGISAAAAAVEEPKEAEPKAAEPSP 77

Query: 894  VKAEKKEASNGXXXXXXXXXXXXXXXKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVR 715
               E    SNG                F DPRWIGGTWDLKQF KDG T+WD+VIDAEVR
Sbjct: 78   AAVESSLGSNGAVKDAEVKLESK----FVDPRWIGGTWDLKQFQKDGSTDWDSVIDAEVR 133

Query: 714  RRKWLQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSL 535
            RRKWL+ NPESS ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAM+GFFMAY VDSL
Sbjct: 134  RRKWLESNPESSTNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMVGFFMAYFVDSL 193

Query: 534  TGVGLVDQMGNFFCKTXXXXXXXXXXXVRKNEDVENLKNLLQETTLYDKQWQATWKDET 358
            TGVGLVDQMGNFFCKT           +RKNED+E LK L+ ETT YDKQWQATW+DET
Sbjct: 194  TGVGLVDQMGNFFCKTLLFIAVAGVLLIRKNEDIETLKKLVDETTFYDKQWQATWQDET 252


>ref|XP_002329601.1| light harvesting-like protein 3 [Populus trichocarpa]
            gi|222870310|gb|EEF07441.1| light harvesting-like protein
            3 [Populus trichocarpa]
          Length = 258

 Score =  274 bits (700), Expect = 4e-71
 Identities = 141/235 (60%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
 Frame = -2

Query: 1038 TKPHYLQRPYLSSLCKKKDLIFLSIKATGD----GTMGSAVTVQEKK-----EGASEVKA 886
            +KPH+  +  LS     +  +  + KA+ D    G   SA TV+E K       +S+   
Sbjct: 18   SKPHFTYKSTLSLGPTNRPFLLSTPKASTDNGGAGVSASAATVEEPKLEQKTPESSDSVP 77

Query: 885  EKKEASNGXXXXXXXXXXXXXXXKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRK 706
              K +SNG                FGDPRWI GTWDLKQF KDGKT+WDAVIDAE RRRK
Sbjct: 78   VAKNSSNGAVAAGGEEKVEVSK--FGDPRWISGTWDLKQFQKDGKTDWDAVIDAEARRRK 135

Query: 705  WLQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGV 526
            WLQ NPESS+N++PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGV
Sbjct: 136  WLQCNPESSSNNDPVVFDTSIIPWWTWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGV 195

Query: 525  GLVDQMGNFFCKTXXXXXXXXXXXVRKNEDVENLKNLLQETTLYDKQWQATWKDE 361
            GLVDQM NFFCKT           +RKNED+E +K LL+ETT YDKQWQATW+DE
Sbjct: 196  GLVDQMSNFFCKTLLFVAVVGVLLIRKNEDLETIKKLLEETTFYDKQWQATWQDE 250