BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010259
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   485   e-134
emb|CBI37538.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127
gb|ACY01922.1| hypothetical protein [Beta vulgaris]                   460   e-127
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   456   e-126

>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  485 bits (1248), Expect = e-134
 Identities = 228/354 (64%), Positives = 277/354 (78%), Gaps = 7/354 (1%)
 Frame = +1

Query: 226  MPVEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 405
            MP+EMP GLPFSVDTW+PSS +KRHHFLTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQ
Sbjct: 1    MPIEMPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQ 60

Query: 406  YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 585
            YPQLD SLFV IE+G  +V++DPDG F V+AFDANHCPGA+MFLFEG+FGNILHTGDCRL
Sbjct: 61   YPQLDDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRL 120

Query: 586  TLECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPTKDSAIIEVINCIWKHPNA 765
              ECLQNLP+KYV +KG+EPKC  D +FLDCTFG + +  P+K  AI +VINCIWKHP+A
Sbjct: 121  IPECLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDA 180

Query: 766  PVVYLTCDLLAQDKLLVEVSRTFESKVYVDRINNAKCFQALTITAPEVLTEDKSSRFQIF 945
            P+VYL  D+L Q+++L+ VSR F SK++VD+ NN +CFQALT   PE+L++D SSRFQ+F
Sbjct: 181  PIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVF 240

Query: 946  E-FDKYYERAREKLEEGRFNFQPEPLFIRPSAQWYVFEED-PETEMPIGPK-----KDSF 1104
            E F K  ERA+ KL E + N  PEPL IRPSAQWY  EED P+TE           +D F
Sbjct: 241  EGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQF 300

Query: 1105 GVWHICYSSHSSXXXXXXXXXXXXPKKVVSTTPSCSAMELNYVKKHCLNIQVSS 1266
            G+WH+CYS HSS            PK+VVSTTPSC AMELNYVKKHC +  ++S
Sbjct: 301  GIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITS 354


>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  477 bits (1228), Expect = e-132
 Identities = 225/350 (64%), Positives = 273/350 (78%), Gaps = 7/350 (2%)
 Frame = +1

Query: 238  MPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQL 417
            MP GLPFSVDTW+PSS +KRHHFLTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQYPQL
Sbjct: 39   MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQL 98

Query: 418  DASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRLTLEC 597
            D SLFV IE+G  +V++DPDG F V+AFDANHCPGA+MFLFEG+FGNILHTGDCRL  EC
Sbjct: 99   DDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPEC 158

Query: 598  LQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPTKDSAIIEVINCIWKHPNAPVVY 777
            LQNLP+KYV +KG+EPKC  D +FLDCTFG + +  P+K  AI +VINCIWKHP+AP+VY
Sbjct: 159  LQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVY 218

Query: 778  LTCDLLAQDKLLVEVSRTFESKVYVDRINNAKCFQALTITAPEVLTEDKSSRFQIFE-FD 954
            L  D+L Q+++L+ VSR F SK++VD+ NN +CFQALT   PE+L++D SSRFQ+FE F 
Sbjct: 219  LCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFP 278

Query: 955  KYYERAREKLEEGRFNFQPEPLFIRPSAQWYVFEED-PETEMPIGPK-----KDSFGVWH 1116
            K  ERA+ KL E + N  PEPL IRPSAQWY  EED P+TE           +D FG+WH
Sbjct: 279  KLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWH 338

Query: 1117 ICYSSHSSXXXXXXXXXXXXPKKVVSTTPSCSAMELNYVKKHCLNIQVSS 1266
            +CYS HSS            PK+VVSTTPSC AMELNYVKKHC +  ++S
Sbjct: 339  VCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITS 388


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  460 bits (1184), Expect = e-127
 Identities = 223/357 (62%), Positives = 267/357 (74%), Gaps = 7/357 (1%)
 Frame = +1

Query: 226  MPVEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 405
            MP+E+P GLPFSVDTWSP+S RKRHHFLTHAHKDH+SGI  H+ YPIY+TH+TK +VLQ 
Sbjct: 1    MPIELPRGLPFSVDTWSPNSKRKRHHFLTHAHKDHTSGILTHSCYPIYATHLTKLLVLQN 60

Query: 406  YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 585
            YPQL+ SLFV IE+G  VV  DPDG F V+AFDANHCPGA+MFLFEGNFGNILHTGDCRL
Sbjct: 61   YPQLEGSLFVGIEVGESVVFNDPDGEFKVTAFDANHCPGAVMFLFEGNFGNILHTGDCRL 120

Query: 586  TLECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPTKDSAIIEVINCIWKHPNA 765
            T E ++ LPEKY+ +KG+EP+C LD +FLDCTFG    K P+K SAI +V+NCIWKHP A
Sbjct: 121  TPEGVRCLPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLNCIWKHPAA 180

Query: 766  PVVYLTCDLLAQDKLLVEVSRTFESKVYVDRINNAKCFQALTITAPEVLTEDKSSRFQIF 945
             VVYLTCDLL Q+ +L  VS TF SK++VD + N + F+ALT+T PE+LT+D SSRF +F
Sbjct: 181  TVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRALTLTVPEILTQDPSSRFHMF 240

Query: 946  E-FDKYYERAREKLEEGRFNFQPEPLFIRPSAQWYVFEED-PETEMPIGPK-----KDSF 1104
            + F K YERA +K+ E + N QPEPL IRPSAQWY  EE   ETE     +     +D  
Sbjct: 241  DGFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEGYSETESQRKLRFNEAVRDPN 300

Query: 1105 GVWHICYSSHSSXXXXXXXXXXXXPKKVVSTTPSCSAMELNYVKKHCLNIQVSSDGR 1275
             VWH+CYS HSS            PK VVSTTPSC AMEL+YVKKHC   +++ D R
Sbjct: 301  SVWHVCYSMHSSRGELEWALQLLVPKWVVSTTPSCLAMELDYVKKHCSGTKLTLDDR 357


>gb|ACY01922.1| hypothetical protein [Beta vulgaris]
          Length = 551

 Score =  460 bits (1183), Expect = e-127
 Identities = 215/356 (60%), Positives = 267/356 (75%), Gaps = 8/356 (2%)
 Frame = +1

Query: 226  MPVEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 405
            MP+EMP GLPFSVDTW+P+S  KRHHFLTHAHKDH S IT++ S+PIYST +TK+++L  
Sbjct: 1    MPIEMPRGLPFSVDTWTPNSKFKRHHFLTHAHKDHCSNITSYFSFPIYSTLLTKSLILCY 60

Query: 406  YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 585
            +PQLD SLFV+IE+G  ++++DPDG F+V+AFDANHCPGA+MFLFEG FGNILHTGDCRL
Sbjct: 61   FPQLDESLFVQIEVGQSIIVDDPDGAFTVTAFDANHCPGAVMFLFEGEFGNILHTGDCRL 120

Query: 586  TLECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPTKDSAIIEVINCIWKHPNA 765
            T ECLQNLPEKY+  KG+EP   LD +FLDCTFG + +  P+K SA+ +VINCIWKHP+ 
Sbjct: 121  TPECLQNLPEKYIARKGKEPSSQLDFVFLDCTFGKSLMDIPSKQSALQQVINCIWKHPDV 180

Query: 766  PVVYLTCDLLAQDKLLVEVSRTFESKVYVDRINNAKCFQALTITAPEVLTEDKSSRFQIF 945
            P VYLTC++L Q+++LV+V +TF SK+YVD+  +   +QA+   AP++++ED SSRF +F
Sbjct: 181  PTVYLTCNMLGQEEVLVKVFQTFGSKIYVDKAKHPDFYQAMGFIAPQIISEDPSSRFHLF 240

Query: 946  E-FDKYYERAREKLEEGRFNFQPEPLFIRPSAQWYVFEEDPETEMPIG-------PKKDS 1101
            E F K YE+A++K+ E R N QPEPL IRPSAQWY  EE   T M          P KD 
Sbjct: 241  EGFPKLYEKAKKKISEARENMQPEPLIIRPSAQWYAREETELTVMERKILERSNIPVKDQ 300

Query: 1102 FGVWHICYSSHSSXXXXXXXXXXXXPKKVVSTTPSCSAMELNYVKKHCLNIQVSSD 1269
            FGVWH+CYS HSS            PK VVSTTP C AMEL YVKKHC N + S D
Sbjct: 301  FGVWHVCYSMHSSRQELEWAMELLSPKWVVSTTPECRAMELEYVKKHCFNNRASDD 356


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis]
            gi|223530792|gb|EEF32657.1| DNA cross-link repair protein
            pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  456 bits (1172), Expect = e-126
 Identities = 216/355 (60%), Positives = 267/355 (75%), Gaps = 7/355 (1%)
 Frame = +1

Query: 226  MPVEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 405
            MP+EMP GLPFSVDTWSP+S RKRHHFLTHAHKDH SGI AH+SYPIY+TH+TK+++L  
Sbjct: 1    MPIEMPRGLPFSVDTWSPTSKRKRHHFLTHAHKDHCSGILAHSSYPIYATHLTKSLLLLY 60

Query: 406  YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 585
            +PQL+ SLFV IE+G  +VI+DP G FSV+AFDANHCPGA+MFLFEG+FGNILHTGDCRL
Sbjct: 61   FPQLEDSLFVGIEVGQSLVIDDPYGNFSVTAFDANHCPGAVMFLFEGSFGNILHTGDCRL 120

Query: 586  TLECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPTKDSAIIEVINCIWKHPNA 765
            + EC+Q LP+KY+ + G+EP+C LD +FLDCTFG    K P+K SA  +VINCIWKHP A
Sbjct: 121  SPECIQCLPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVINCIWKHPAA 180

Query: 766  PVVYLTCDLLAQDKLLVEVSRTFESKVYVDRINNAKCFQALTITAPEVLTEDKSSRFQIF 945
             +VYLTCDLL Q++LL  VSRTF SK+YV++  N +CF ALT+T P++LT+D SSRF +F
Sbjct: 181  AIVYLTCDLLGQEELLANVSRTFGSKIYVEKAANPECFHALTLTVPQILTQDPSSRFHVF 240

Query: 946  E-FDKYYERAREKLEEGRFNFQPEPLFIRPSAQWYVFEED---PETEMPI---GPKKDSF 1104
              F   YERA  K+ E + +FQPEPL IRPSAQWY  EE+    E+   +      +D F
Sbjct: 241  NGFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRLSEAVRDQF 300

Query: 1105 GVWHICYSSHSSXXXXXXXXXXXXPKKVVSTTPSCSAMELNYVKKHCLNIQVSSD 1269
            G+WH+CYS HSS            PK VVSTTP C A EL Y++KH    Q++SD
Sbjct: 301  GIWHVCYSMHSSREELEWFLQLLAPKWVVSTTPPCRATELEYIRKHSFGNQLTSD 355