BLASTX nr result

ID: Coptis23_contig00010248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010248
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522717.1| Protein phosphatase 1 regulatory subunit, pu...   302   7e-80
ref|XP_002272885.1| PREDICTED: uncharacterized protein LOC100257...   278   1e-72
emb|CAN75055.1| hypothetical protein VITISV_039451 [Vitis vinifera]   278   1e-72
ref|XP_002326103.1| predicted protein [Populus trichocarpa] gi|2...   271   1e-70
ref|XP_002319941.1| predicted protein [Populus trichocarpa] gi|2...   267   2e-69

>ref|XP_002522717.1| Protein phosphatase 1 regulatory subunit, putative [Ricinus communis]
            gi|223538067|gb|EEF39679.1| Protein phosphatase 1
            regulatory subunit, putative [Ricinus communis]
          Length = 673

 Score =  302 bits (773), Expect = 7e-80
 Identities = 150/207 (72%), Positives = 172/207 (83%), Gaps = 2/207 (0%)
 Frame = +2

Query: 5    RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLNIVDLRFNKISTAKCLGQLAANYSSL 184
            RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKL ++DLRFNKISTAKCLGQLAANY+SL
Sbjct: 462  RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLTVLDLRFNKISTAKCLGQLAANYNSL 521

Query: 185  QAINLEGNPAQRNVGDEQLKKYLQSILPHLMYFNRQTIRASSSKEVTDRSARSAIASHQL 364
            QAI+LEGNPAQ+NVGDEQLKKYLQS+LPHL+YFNRQ I+ S+ K+  DRS R  I +HQ 
Sbjct: 522  QAISLEGNPAQKNVGDEQLKKYLQSLLPHLVYFNRQPIKVSTLKDAADRSVRLGINAHQF 581

Query: 365  DRGVRSENKLIRKGSHTLSTGKASSSSNHGSRVQAVFSSKQSKDRHGRLPPAGTKG--SH 538
            DRG+RS+NK  RKGSH L   + +SSS HG + QA+ S K S+ RH RLPP GTK    H
Sbjct: 582  DRGIRSDNKAARKGSHGLGGTRPTSSSTHGRKSQALVSPKPSRGRHARLPPTGTKAITGH 641

Query: 539  RHHYLDFGSKLFSLRPDLSMRRSQSEG 619
            RHHY D GSKL +LR +LS+RRS+SEG
Sbjct: 642  RHHYFDIGSKLLNLRSELSIRRSRSEG 668


>ref|XP_002272885.1| PREDICTED: uncharacterized protein LOC100257895 [Vitis vinifera]
            gi|296081251|emb|CBI17995.3| unnamed protein product
            [Vitis vinifera]
          Length = 672

 Score =  278 bits (711), Expect = 1e-72
 Identities = 142/209 (67%), Positives = 170/209 (81%), Gaps = 4/209 (1%)
 Frame = +2

Query: 5    RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLNIVDLRFNKISTAKCLGQLAANYSSL 184
            RI HGLASCSSLKELYLAGNKISEVEGLHRLLKLNI+DLR+NKISTAKCLGQLAANY+SL
Sbjct: 461  RIAHGLASCSSLKELYLAGNKISEVEGLHRLLKLNILDLRYNKISTAKCLGQLAANYNSL 520

Query: 185  QAINLEGNPAQRNVGDEQLKKYLQSILPHLMYFNRQTIRASSSKEVTDRSARSAIASHQL 364
            QAI+LEGNPAQ+NVGDEQLKK LQ +LPHL Y+NRQTI+ S+ K+  DRS R  +++HQ 
Sbjct: 521  QAISLEGNPAQKNVGDEQLKKCLQGLLPHLAYYNRQTIKVSTLKDTADRSVRLGMSAHQF 580

Query: 365  DRGVRSENKLIRKGSHTLSTGKASSSSNHGSRVQAVFSSKQSKDRHGRL--PPAGTKGS- 535
            DRG+RSE+K +RKGSH +++ K SSS+ HG +  A  S K+SK+RH RL  PP GTK + 
Sbjct: 581  DRGLRSEHKSVRKGSHGVASNKPSSSATHGRK--AAVSPKRSKNRHVRLPPPPTGTKATA 638

Query: 536  -HRHHYLDFGSKLFSLRPDLSMRRSQSEG 619
             HR H+LDF +     +PD  MRRS+SEG
Sbjct: 639  HHRPHHLDFANHFLGFKPDSFMRRSRSEG 667


>emb|CAN75055.1| hypothetical protein VITISV_039451 [Vitis vinifera]
          Length = 730

 Score =  278 bits (711), Expect = 1e-72
 Identities = 142/209 (67%), Positives = 170/209 (81%), Gaps = 4/209 (1%)
 Frame = +2

Query: 5    RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLNIVDLRFNKISTAKCLGQLAANYSSL 184
            RI HGLASCSSLKELYLAGNKISEVEGLHRLLKLNI+DLR+NKISTAKCLGQLAANY+SL
Sbjct: 519  RIAHGLASCSSLKELYLAGNKISEVEGLHRLLKLNILDLRYNKISTAKCLGQLAANYNSL 578

Query: 185  QAINLEGNPAQRNVGDEQLKKYLQSILPHLMYFNRQTIRASSSKEVTDRSARSAIASHQL 364
            QAI+LEGNPAQ+NVGDEQLKK LQ +LPHL Y+NRQTI+ S+ K+  DRS R  +++HQ 
Sbjct: 579  QAISLEGNPAQKNVGDEQLKKCLQGLLPHLAYYNRQTIKVSTLKDTADRSVRLGMSAHQF 638

Query: 365  DRGVRSENKLIRKGSHTLSTGKASSSSNHGSRVQAVFSSKQSKDRHGRL--PPAGTKGS- 535
            DRG+RSE+K +RKGSH +++ K SSS+ HG +  A  S K+SK+RH RL  PP GTK + 
Sbjct: 639  DRGLRSEHKSVRKGSHGVASNKPSSSATHGRK--AAVSPKRSKNRHVRLPPPPTGTKATA 696

Query: 536  -HRHHYLDFGSKLFSLRPDLSMRRSQSEG 619
             HR H+LDF +     +PD  MRRS+SEG
Sbjct: 697  HHRPHHLDFANHFLGFKPDSFMRRSRSEG 725


>ref|XP_002326103.1| predicted protein [Populus trichocarpa] gi|222862978|gb|EEF00485.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  271 bits (694), Expect = 1e-70
 Identities = 139/207 (67%), Positives = 162/207 (78%), Gaps = 2/207 (0%)
 Frame = +2

Query: 5   RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLNIVDLRFNKISTAKCLGQLAANYSSL 184
           RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKL ++DLRFNKIST KCLGQLAANY+SL
Sbjct: 239 RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLTVLDLRFNKISTTKCLGQLAANYNSL 298

Query: 185 QAINLEGNPAQRNVGDEQLKKYLQSILPHLMYFNRQTIRASSSKEVTDRSARSAIASHQL 364
           QAI+LEGNPAQ+NVGDEQLKKYLQ +LPHL+YFNRQ  +AS+ K+  DRS R  I+SHQ 
Sbjct: 299 QAISLEGNPAQKNVGDEQLKKYLQGLLPHLVYFNRQPTKASTLKDAADRSVRLGISSHQF 358

Query: 365 DRGVRSENKLIRKGSHTLSTGKASSSSNHGSRVQAVFSSKQSKDRHGRLPPAGTK--GSH 538
           DRG+RSENK  RK SH+L+  + SSSS H  +  AV S K+S+ RH RLPP G K   SH
Sbjct: 359 DRGLRSENKAARKASHSLAGARPSSSSTHARKSHAVTSPKRSRGRHLRLPPNGAKTTSSH 418

Query: 539 RHHYLDFGSKLFSLRPDLSMRRSQSEG 619
           R+H+       F+   + S  RS+SEG
Sbjct: 419 RYHHNHADLDKFNYGLEFSFHRSRSEG 445


>ref|XP_002319941.1| predicted protein [Populus trichocarpa] gi|222858317|gb|EEE95864.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  267 bits (683), Expect = 2e-69
 Identities = 135/207 (65%), Positives = 164/207 (79%), Gaps = 2/207 (0%)
 Frame = +2

Query: 5   RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLNIVDLRFNKISTAKCLGQLAANYSSL 184
           RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKL ++DLRFNKISTAKCLG LAAN+SSL
Sbjct: 257 RIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLTLLDLRFNKISTAKCLGLLAANHSSL 316

Query: 185 QAINLEGNPAQRNVGDEQLKKYLQSILPHLMYFNRQTIRASSSKEVTDRSARSAIASHQL 364
           QAI+LEGNP Q+NVGDEQLKKYLQ +LPHL+YFNRQ+I+AS+ K+  DRS R  I +HQ 
Sbjct: 317 QAISLEGNPVQKNVGDEQLKKYLQGLLPHLLYFNRQSIKASTLKDSVDRSVRVGINAHQF 376

Query: 365 DRGVRSENKLIRKGSHTLSTGKASSSSNHGSRVQAVFSSKQSKDRHGRLPPAGTKGS--H 538
           DRG+RSE+K +RK SH L+  +   SS HG + Q + S+K+S  RH    P+ T+ +  H
Sbjct: 377 DRGLRSESKAVRKVSHGLAGSRPLPSSTHGRKSQPLTSTKRSSGRHLHSQPSRTQSTTGH 436

Query: 539 RHHYLDFGSKLFSLRPDLSMRRSQSEG 619
            HH++D GSKL + R +  + RSQSEG
Sbjct: 437 HHHFIDPGSKLLNFRSEFLVHRSQSEG 463


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