BLASTX nr result

ID: Coptis23_contig00010245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010245
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83252.1| hypothetical protein VITISV_034795 [Vitis vinife...   197   2e-48
ref|XP_002324212.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-44
ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|2...   179   5e-43
ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|2...   179   7e-43
ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus c...   172   6e-41

>emb|CAN83252.1| hypothetical protein VITISV_034795 [Vitis vinifera]
           gi|296081829|emb|CBI20834.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  197 bits (500), Expect = 2e-48
 Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 2/159 (1%)
 Frame = +1

Query: 73  MANEPHPKWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVRY 252
           MA E   KWEGK +A+L   KPDQVWP LEDF S+HKW+PS+DTC++V+G+ GQPG +RY
Sbjct: 1   MAEETQFKWEGKATAELKSTKPDQVWPFLEDFCSLHKWMPSLDTCYQVEGVKGQPGLIRY 60

Query: 253 CSST--SSDGSGNQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKVSEEGNNH 426
           CSST  S D       +WV E+LLTID  +   SYEV+D+NMG NSYV T KV       
Sbjct: 61  CSSTAASPDNPDQTTVNWVKEKLLTIDPINHCFSYEVLDNNMGFNSYVTTFKVIPINGG- 119

Query: 427 QVGCLIEWSFEVDPVKGWRLEDLVSYVDSSLQGMTERME 543
             GCLI+WSF  DPV+GWR EDL SY+DSSLQ M ++ME
Sbjct: 120 --GCLIQWSFVCDPVQGWRYEDLASYIDSSLQFMAKKME 156


>ref|XP_002324212.1| predicted protein [Populus trichocarpa] gi|222865646|gb|EEF02777.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  183 bits (465), Expect = 3e-44
 Identities = 85/166 (51%), Positives = 116/166 (69%), Gaps = 7/166 (4%)
 Frame = +1

Query: 73  MANEPHPKWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVRY 252
           M  +P PKWEGKVS +L     DQ+WPLL DFF++HKW PS+ TC+ + G +G+PGC+R+
Sbjct: 1   MEQDPQPKWEGKVSERLPKATADQIWPLLNDFFNLHKWFPSLATCYGIHGTNGEPGCIRH 60

Query: 253 C-------SSTSSDGSGNQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKVSE 411
           C       + T++DG  +Q  SW +ERL  +D  +RSLSYE+VDSN+G  SYV+T+KV  
Sbjct: 61  CEGSSIPSTDTNTDGH-SQPVSWSSERLTVVDHVERSLSYEIVDSNIGFKSYVSTVKVVP 119

Query: 412 EGNNHQVGCLIEWSFEVDPVKGWRLEDLVSYVDSSLQGMTERMENA 549
           +G++ Q GC+IEWSF VDPV G  L++LV      LQ M ER+E+A
Sbjct: 120 QGDDGQDGCVIEWSFNVDPVAGLVLDELVRKYKVGLQQMAERLEDA 165


>ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|222834873|gb|EEE73322.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  179 bits (454), Expect = 5e-43
 Identities = 89/171 (52%), Positives = 118/171 (69%), Gaps = 9/171 (5%)
 Frame = +1

Query: 73  MANEPHPKWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVRY 252
           M  E   KWEGK + +L GP  DQVWP LEDF ++ KWLP +DTC++V+G  GQPG VRY
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRY 60

Query: 253 CSS--TSSDGS--GNQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKV----- 405
           CSS   SSDGS  GN++  W  E+L+ I+ ++R LSYE++++N G  SYVAT+K      
Sbjct: 61  CSSGTASSDGSHEGNKVI-WAKEKLIMINPSERCLSYEILENNAGFKSYVATMKAFPIND 119

Query: 406 SEEGNNHQVGCLIEWSFEVDPVKGWRLEDLVSYVDSSLQGMTERMENAQLA 558
            +E  + Q GC IEWSF  DP++GW LED  SY++SSLQ M ++ME A L+
Sbjct: 120 GDEDGDGQHGCKIEWSFIADPIEGWPLEDFNSYINSSLQFMGQKMEQAVLS 170


>ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|222854570|gb|EEE92117.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  179 bits (453), Expect = 7e-43
 Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
 Frame = +1

Query: 73  MANEPHPKWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVRY 252
           M  E   KWEGK + +L GP  DQVWP LEDF ++ KWLP +DTC++V+G  GQPG VRY
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRY 60

Query: 253 CSS--TSSDGS--GNQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKVS---E 411
           CSS   SSDGS  GN++  W  E+L+ I+ ++R LSYE++++N G  SYVAT+KVS   +
Sbjct: 61  CSSGTASSDGSHEGNKVI-WAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPIND 119

Query: 412 EGNNHQVGCLIEWSFEVDPVKGWRLEDLVSYVDSSLQGMTERMENAQLAK 561
              + Q GC IEWSF  DP++GW LED  SY++SSLQ M ++ME   L++
Sbjct: 120 GDGDGQHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKMERDVLSR 169


>ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus communis]
           gi|223544341|gb|EEF45862.1| hypothetical protein
           RCOM_0800710 [Ricinus communis]
          Length = 343

 Score =  172 bits (436), Expect = 6e-41
 Identities = 79/155 (50%), Positives = 108/155 (69%), Gaps = 3/155 (1%)
 Frame = +1

Query: 94  KWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVRYCSST--- 264
           KW+GK + +L G   DQVWP + DF ++HKW P++DTC++V+G  GQPG VRYC+S    
Sbjct: 183 KWDGKATVELKGLTADQVWPFVADFCNLHKWFPNLDTCYQVEGQLGQPGLVRYCASVPQP 242

Query: 265 SSDGSGNQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKVSEEGNNHQVGCLI 444
           SSDGSG    SWV E+L+ I+  +R LSYEVVDS+MG  SY AT ++ +   + Q GC I
Sbjct: 243 SSDGSGETTFSWVKEKLVMINPDERCLSYEVVDSSMGFESYAATFRLLQVNGDAQHGCKI 302

Query: 445 EWSFEVDPVKGWRLEDLVSYVDSSLQGMTERMENA 549
           EWSF  DPV+ W  +D V+Y +S LQ M +++E+A
Sbjct: 303 EWSFVSDPVEAWSFQDFVTYANSCLQFMAKKIEDA 337



 Score =  164 bits (416), Expect = 1e-38
 Identities = 82/180 (45%), Positives = 121/180 (67%), Gaps = 7/180 (3%)
 Frame = +1

Query: 70  NMANEPHPKWEGKVSAKLTGPKPDQVWPLLEDFFSIHKWLPSIDTCHKVDGISGQPGCVR 249
           +   +   KWEGKVS  L   K +Q+WPL  DFF+IHKWLP++ TC+ + G +G+ GCVR
Sbjct: 4   HQTQQQQQKWEGKVSTGLPKAKAEQIWPLFTDFFNIHKWLPTLRTCYGICGTNGERGCVR 63

Query: 250 YCSSTS-----SDGSG-NQMTSWVTERLLTIDKTDRSLSYEVVDSNMGLNSYVATIKVSE 411
           YC+  S     +D S  N  +SW  ERL+ +D  +R L+YE+VDSN+G  SYV+T+K+  
Sbjct: 64  YCAGFSIPPEVTDKSHLNHNSSWSKERLVAVDHVERCLTYEIVDSNIGFKSYVSTVKIVP 123

Query: 412 EGNNHQVGCLIEWSFEVDPVKGWRLEDLVSYVDSSLQGMTERMENA-QLAK*SQLTGVSD 588
            G  +  GC+IEWSF+VDPVKG+ L+DL+   + +LQ + +RME++  ++K   LT +S+
Sbjct: 124 AGVGN--GCVIEWSFQVDPVKGYVLDDLIKKYERALQVIGKRMEDSFDVSKPLLLTEISE 181


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