BLASTX nr result

ID: Coptis23_contig00010241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010241
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19037.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis...   475   e-131
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [...   452   e-125

>emb|CBI19037.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  477 bits (1227), Expect = e-132
 Identities = 246/382 (64%), Positives = 295/382 (77%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1138 MGDQQGTCTHLIATFNKAKPYLLMVALQCGYAGMYIVTMLCLKRGLSHYVLVVYRHAAAT 959
            MGDQ      L   F+K K YL +V+LQ GYAGMYI+TM+ LK G++HYVLVVYRHA AT
Sbjct: 1    MGDQT-LFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVAT 59

Query: 958  IAVAPFALIFDRKIRPKLTISIFIKIMALGFIEPVIDQNLYYVGMKYTSATFASAMYNVL 779
            + +APFAL+ +RK+RPK+T+S F+KIM LGF+EPV+DQNLYYVGMKYTSATFASA  NVL
Sbjct: 60   LVIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVL 119

Query: 778  PAITFIMAIIFRLEKVKIKSIHSQAKIVGTIVTLGGAMLMTLYKGPTIDMVWXXXXXXXX 599
            PAITFI+AIIFRLEK+ IK I SQAK++GT++T+ GAM+MTLYKGP ID +         
Sbjct: 120  PAITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHHE 179

Query: 598  XXXXSTA-QNWVVGTLMLLGSCIGWSGFFILQSITLKEYPAELSLSSLIVFLGMIQGAAV 422
                 +A QNW  GTLMLLGSC GWSGFFILQS TLK+YPAELSL++LI F+G +QGAAV
Sbjct: 180  SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 421  ALVMERDFSAWVIGFDSRLLAPVYSGIVCSAIAYYVQGVVIKVRGPVFVTAFNPLCMIVV 242
            ALVMERD +AW +GFDSR+LA  YSG+VCS IAYYVQ +VIK RGPVFVTAF+PLCMI+ 
Sbjct: 240  ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIIT 299

Query: 241  AALGSLILAEQLHLGSVLGAIVIVVGLYSVIWGKSKDQIGSSTLTNGKE---SYPELPIA 71
            AALGS ILAE+LHLGS+LGA VIVVGLYSV+WGKSK+   S++     E      ELP+A
Sbjct: 300  AALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSASQAPTDEKAGGSHELPVA 359

Query: 70   VKDANKTSITMTVIDHDSTNDG 5
                   S T   I H++  +G
Sbjct: 360  -------SSTKPSIVHNNNMEG 374


>ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 389

 Score =  475 bits (1222), Expect = e-131
 Identities = 236/343 (68%), Positives = 281/343 (81%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1138 MGDQQGTCTHLIATFNKAKPYLLMVALQCGYAGMYIVTMLCLKRGLSHYVLVVYRHAAAT 959
            MGDQ      L   F+K K YL +V+LQ GYAGMYI+TM+ LK G++HYVLVVYRHA AT
Sbjct: 1    MGDQT-LFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVAT 59

Query: 958  IAVAPFALIFDRKIRPKLTISIFIKIMALGFIEPVIDQNLYYVGMKYTSATFASAMYNVL 779
            + +APFAL+ +RK+RPK+T+S F+KIM LGF+EPV+DQNLYYVGMKYTSATFASA  NVL
Sbjct: 60   LVIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVL 119

Query: 778  PAITFIMAIIFRLEKVKIKSIHSQAKIVGTIVTLGGAMLMTLYKGPTIDMVWXXXXXXXX 599
            PAITFI+AIIFRLEK+ IK I SQAK++GT++T+ GAM+MTLYKGP ID +         
Sbjct: 120  PAITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHHE 179

Query: 598  XXXXSTA-QNWVVGTLMLLGSCIGWSGFFILQSITLKEYPAELSLSSLIVFLGMIQGAAV 422
                 +A QNW  GTLMLLGSC GWSGFFILQS TLK+YPAELSL++LI F+G +QGAAV
Sbjct: 180  SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 421  ALVMERDFSAWVIGFDSRLLAPVYSGIVCSAIAYYVQGVVIKVRGPVFVTAFNPLCMIVV 242
            ALVMERD +AW +GFDSR+LA  YSG+VCS IAYYVQ +VIK RGPVFVTAF+PLCMI+ 
Sbjct: 240  ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIIT 299

Query: 241  AALGSLILAEQLHLGSVLGAIVIVVGLYSVIWGKSKDQIGSST 113
            AALGS ILAE+LHLGS+LGA VIVVGLYSV+WGKSK+   S++
Sbjct: 300  AALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSAS 342


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  464 bits (1195), Expect = e-128
 Identities = 228/348 (65%), Positives = 283/348 (81%), Gaps = 3/348 (0%)
 Frame = -2

Query: 1090 KAKPYLLMVALQCGYAGMYIVTMLCLKRGLSHYVLVVYRHAAATIAVAPFALIFDRKIRP 911
            K KPYL MV+LQ GYAGMYI+TM+ LK G+SHY+L VYRH  ATI +APFAL+ +RKIRP
Sbjct: 3    KVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKIRP 62

Query: 910  KLTISIFIKIMALGFIEPVIDQNLYYVGMKYTSATFASAMYNVLPAITFIMAIIFRLEKV 731
            KLT+ IF++IMALGF+EPV+DQNLYY+GMKYTSATFASA  N LPAITFIMA+IFRLE V
Sbjct: 63   KLTLPIFLRIMALGFLEPVLDQNLYYLGMKYTSATFASATVNALPAITFIMALIFRLETV 122

Query: 730  KIKSIHSQAKIVGTIVTLGGAMLMTLYKGPTIDMVWXXXXXXXXXXXXSTA-QNWVVGTL 554
              K +HS AK+VGT++T+ GAM+MTLYKGP ID +             ++  Q+W+ GTL
Sbjct: 123  NFKKLHSAAKVVGTVITVTGAMVMTLYKGPIIDFIRSQGAAHRGTTSNASGNQHWLTGTL 182

Query: 553  MLLGSCIGWSGFFILQSITLKEYPAELSLSSLIVFLGMIQGAAVALVMERDFSAWVIGFD 374
            MLL SC GW+ FFILQS TLK+YPAELSL++LI   GM++GAAV+LVMERD SAW IGFD
Sbjct: 183  MLLASCCGWASFFILQSFTLKKYPAELSLTALICMTGMVEGAAVSLVMERDMSAWKIGFD 242

Query: 373  SRLLAPVYSGIVCSAIAYYVQGVVIKVRGPVFVTAFNPLCMIVVAALGSLILAEQLHLGS 194
            SRLLA  YSG+VCS IAYYVQGVVI+ +GPVFVT+F+PLCMI+ AALGS++L+EQ+ LGS
Sbjct: 243  SRLLAAAYSGVVCSGIAYYVQGVVIRKKGPVFVTSFSPLCMIITAALGSVVLSEQIRLGS 302

Query: 193  VLGAIVIVVGLYSVIWGKSKDQIGSST--LTNGKESYPELPIAVKDAN 56
            ++GA++IV GLY+V+WGKSKD I SST  LTN K   P+  + ++D++
Sbjct: 303  IIGAVLIVFGLYTVVWGKSKDSISSSTMELTNEKGG-PQDQLPIQDSS 349


>ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  457 bits (1175), Expect = e-126
 Identities = 224/341 (65%), Positives = 274/341 (80%), Gaps = 2/341 (0%)
 Frame = -2

Query: 1090 KAKPYLLMVALQCGYAGMYIVTMLCLKRGLSHYVLVVYRHAAATIAVAPFALIFDRKIRP 911
            K K YL MV+LQ GYAGMYI+TM+ LK G+SHY+L VYRH  AT+ +APFA + +RKIRP
Sbjct: 3    KVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKIRP 62

Query: 910  KLTISIFIKIMALGFIEPVIDQNLYYVGMKYTSATFASAMYNVLPAITFIMAIIFRLEKV 731
            KLT+SIF++IM LGF+EPV+DQNLYY+GMKYTSATF+SA  N LPAITF+MA+ FRLE V
Sbjct: 63   KLTLSIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFSSATTNALPAITFLMALCFRLETV 122

Query: 730  KIKSIHSQAKIVGTIVTLGGAMLMTLYKGPTIDMVWXXXXXXXXXXXXSTAQNWVVGTLM 551
              K +HS AK +GT++T+ GAM+MTLYKGP ID +             S  Q+ + GTLM
Sbjct: 123  NFKKLHSAAKAIGTVITVTGAMVMTLYKGPVIDFIRSHGAAHHGTSNESGNQHRLTGTLM 182

Query: 550  LLGSCIGWSGFFILQSITLKEYPAELSLSSLIVFLGMIQGAAVALVMERDFSAWVIGFDS 371
            LLGSC  W+GFFILQS TLK+YPAELSL++LI  +G+++GAAV+LVMERD  AW IGFDS
Sbjct: 183  LLGSCCAWAGFFILQSFTLKKYPAELSLTALICVMGVVEGAAVSLVMERDMGAWKIGFDS 242

Query: 370  RLLAPVYSGIVCSAIAYYVQGVVIKVRGPVFVTAFNPLCMIVVAALGSLILAEQLHLGSV 191
            RLLA  YSG+VCS IAYYVQGVVI+ RGPVFVT+F+PLCMI  AALGSL+LAEQ+HLGS+
Sbjct: 243  RLLAAAYSGVVCSGIAYYVQGVVIRERGPVFVTSFSPLCMITTAALGSLVLAEQIHLGSI 302

Query: 190  LGAIVIVVGLYSVIWGKSKDQIGSSTL--TNGKESYPELPI 74
            +GA++IV GLY+V+WGKSK++I SS L  TN K    ELPI
Sbjct: 303  IGAVLIVWGLYTVVWGKSKERINSSKLQMTNEKTGTQELPI 343


>ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
            gi|302141836|emb|CBI19039.3| unnamed protein product
            [Vitis vinifera]
          Length = 382

 Score =  452 bits (1164), Expect = e-125
 Identities = 223/364 (61%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
 Frame = -2

Query: 1132 DQQGTCTHLIATFNKAKPYLLMVALQCGYAGMYIVTMLCLKRGLSHYVLVVYRHAAATIA 953
            + Q +C  +   F++ KPY+LMVALQ G AGMYI++M  L  G+S +VL+VYR+A A +A
Sbjct: 2    EDQTSCAKICVVFSRMKPYVLMVALQFGSAGMYIISMATLNHGMSRFVLIVYRNAVAALA 61

Query: 952  VAPFALIFDRKIRPKLTISIFIKIMALGFIEPVIDQNLYYVGMKYTSATFASAMYNVLPA 773
            +APFAL+ +RKIRPK+TI+IF+KIMALGF+EP++DQNL Y+GM+YTSA+F SA+ N +PA
Sbjct: 62   MAPFALLLERKIRPKITIAIFLKIMALGFLEPILDQNLSYLGMQYTSASFTSAVMNAVPA 121

Query: 772  ITFIMAIIFRLEKVKIKSIHSQAKIVGTIVTLGGAMLMTLYKGPTIDMVWXXXXXXXXXX 593
            +TF+MA++FRLE +KIK   SQAKIVGT++T  GA+LMTLYKGP ID++W          
Sbjct: 122  VTFVMAVVFRLEHIKIKERRSQAKIVGTVLTFSGALLMTLYKGPIIDLIW-SHKTSHNAN 180

Query: 592  XXSTAQNWVVGTLMLLGSCIGWSGFFILQSITLKEYPAELSLSSLIVFLGMIQGAAVALV 413
              ST  +W+ GTL++L  C  WS F+ILQSIT+K YPAELSLS+LI  +G IQ  AV LV
Sbjct: 181  HSSTDTHWITGTLLILVGCCAWSAFYILQSITIKTYPAELSLSTLICLMGAIQSGAVGLV 240

Query: 412  MERDFSAWVIGFDSRLLAPVYSGIVCSAIAYYVQGVVIKVRGPVFVTAFNPLCMIVVAAL 233
             ER  SAW IG+DSRLLAPVY+GIV S + YYVQG+V+K RGPVFVTAFNPLCMI+VAAL
Sbjct: 241  AERHPSAWAIGWDSRLLAPVYTGIVSSGLTYYVQGLVMKTRGPVFVTAFNPLCMIIVAAL 300

Query: 232  GSLILAEQLHLGSVLGAIVIVVGLYSVIWGKSKDQIG-SSTLTNGKESYPELPIAVKDAN 56
            G+LILAEQLHLGS++GAI+I +GLYSV WGKSKDQ G + T T  K    ELPI+  + +
Sbjct: 301  GTLILAEQLHLGSIIGAIIIAIGLYSVAWGKSKDQFGPTPTTTEEKGDAYELPISATEGS 360

Query: 55   KTSI 44
            K  I
Sbjct: 361  KLVI 364


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