BLASTX nr result

ID: Coptis23_contig00010236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010236
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF30544.1| ethylene transcription factor [Castanea sativa]        209   6e-52
gb|AAX84670.1| ethylene response factor [Manihot esculenta]           207   4e-51
gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]   206   7e-51
gb|AEJ87198.1| ethylene-responsive transcription factor [Jatroph...   204   3e-50
gb|ADE41104.1| AP2 domain class transcription factor [Malus x do...   203   4e-50

>gb|AEF30544.1| ethylene transcription factor [Castanea sativa]
          Length = 379

 Score =  209 bits (533), Expect = 6e-52
 Identities = 120/275 (43%), Positives = 159/275 (57%), Gaps = 1/275 (0%)
 Frame = +1

Query: 136 IDPFSFVPKSTASKKRTAAVECNVPAEESAKKKRKNQYRGIRQRPWGKWAAEIRDPSKGA 315
           + PF+F    ++  K   +VE N  AE+SAK+KRKNQYRGIRQRPWGKWAAEIRDP KG 
Sbjct: 74  VKPFAFSAPRSSGSKPVKSVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGV 133

Query: 316 RIWLGTFKTAEEAARAYDTEARRIRGEKAKLNFPSEVPLCAEKETVNSNPQKPLCQASPL 495
           R+WLGTF TAEEAARAYD EARRIRG+KAK+NFP E P  + K +V +N QKPL +A+ L
Sbjct: 134 RVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDETPRASPKRSVKANLQKPLAKAN-L 192

Query: 496 LDDKDIFGVEQKLVKSNPQKLIKXXXXXXXXXXXXXDGRFSKCLGIVEEVP-VNESGFVS 672
              +        LV ++ Q                        +G++EE P  N+ G++ 
Sbjct: 193 NSLQSSLNQNFSLVNNSDQDF---------------------TMGLMEEKPFTNQYGYMD 231

Query: 673 FPMIQNPIEFNSLTPSSGGSLHFKSDQESNTINHSDFGWGDYQSKTPEISSGLSTTLENE 852
              +   +          G ++F SDQ SN+++ SD+GWG+  SKTPEISS  S  +E +
Sbjct: 232 SIPVNADVGLKRFASPHTGPVYFSSDQGSNSVDCSDYGWGEQGSKTPEISSVFSAPVEGD 291

Query: 853 LPFFLDDANLNVKPVSVSKGEGSTEEISTQKLPAE 957
              FL+DAN   K  S S      E+ + + L  E
Sbjct: 292 NTQFLEDANPPKKLKSDSGNAVFVEDNTAKTLSEE 326


>gb|AAX84670.1| ethylene response factor [Manihot esculenta]
          Length = 381

 Score =  207 bits (526), Expect = 4e-51
 Identities = 129/286 (45%), Positives = 160/286 (55%), Gaps = 20/286 (6%)
 Frame = +1

Query: 136 IDPFSFV------PKSTASKKRTAAV---ECNVPAEESAKKKRKNQYRGIRQRPWGKWAA 288
           + PFSF       P++ +  + + AV   E N  AE+SAK+KRKNQYRGIRQRPWGKWAA
Sbjct: 70  VKPFSFSATASPPPRNRSPSRGSTAVKSVEFNGLAEKSAKRKRKNQYRGIRQRPWGKWAA 129

Query: 289 EIRDPSKGARIWLGTFKTAEEAARAYDTEARRIRGEKAKLNFPSEVPLCAEKETVNSNPQ 468
           EIRDP KG R+WLGTF TAEEAARAYD EARRIRG+KAK+NFP E P  + K T+ +NPQ
Sbjct: 130 EIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEAPRASPKRTMKANPQ 189

Query: 469 KPLCQASPLLDDKDIFGVEQKLVKSNPQKLIKXXXXXXXXXXXXXDGRFSKCLGIVEEVP 648
           KPL + +           E     +NP                  D  +   LG V+E P
Sbjct: 190 KPLPKRN---------ATESMSYLNNP------------------DQDYFNTLGSVDEKP 222

Query: 649 -VNESGFV-SFPMIQNPIEFNSLTPSSGGSLHFKSDQESNTINHSDFGWGDYQSKTPEIS 822
            V++   + SFP         S+ P       F SDQ SN+   SDFGWG+  SKTPEIS
Sbjct: 223 LVSQFDLMDSFP-ANGDATVKSIPPCDNVPTFFNSDQGSNSFECSDFGWGEQASKTPEIS 281

Query: 823 SGLSTTLENELPFFLDDAN---------LNVKPVSVSKGEGSTEEI 933
           S LS T E +   F+DDAN          N  P+  S G+  +EE+
Sbjct: 282 SVLSATPEIDESLFMDDANPKKKMKSDSENAVPIEESNGKSLSEEL 327


>gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]
          Length = 382

 Score =  206 bits (524), Expect = 7e-51
 Identities = 123/271 (45%), Positives = 155/271 (57%), Gaps = 11/271 (4%)
 Frame = +1

Query: 157 PKSTASKKRTAAVECNVPAEESAKKKRKNQYRGIRQRPWGKWAAEIRDPSKGARIWLGTF 336
           P S         VE N  AE+SAK+KRKNQYRGIRQRPWGKWAAEIRDP KG R+WLGTF
Sbjct: 83  PSSARGSTTVKLVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF 142

Query: 337 KTAEEAARAYDTEARRIRGEKAKLNFPSEVPLCAEKETVNSNPQKPLCQASPLLDDKDIF 516
            TAEEAARAYD+EARRIRG+KAK+NFP E P  + K +V +NPQK L + +         
Sbjct: 143 NTAEEAARAYDSEARRIRGKKAKVNFPDETPRSSAKRSVKANPQKMLPKTNT-------- 194

Query: 517 GVEQKLVKSNPQKLIKXXXXXXXXXXXXXDGRFSKCLGIVEEVPV-NESGFVSFPMIQNP 693
                 V+ N  + I                 +   +G ++E P  N  GF+S       
Sbjct: 195 ----NAVQPNLNQNINFVNDPNQD--------YYNAMGFLDEKPATNNFGFMSTFPANED 242

Query: 694 IEFNSLTPSSGGSLHFKSDQESNTINHSDFGWGDYQSKTPEISSGLSTTL-ENELPFFLD 870
           +   S TPS    L+F SDQ SN+ + SDFGWG+  SKTPEISS LS  + E++   FL+
Sbjct: 243 VALKSSTPSDAVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSCVMEESDDSLFLE 302

Query: 871 DANLNVK---------PVSVSKGEGSTEEIS 936
           DA+   K         PV  + G+  T+E+S
Sbjct: 303 DASPTKKLKSNPEDLVPVQDNAGKTLTDELS 333


>gb|AEJ87198.1| ethylene-responsive transcription factor [Jatropha curcas]
          Length = 385

 Score =  204 bits (518), Expect = 3e-50
 Identities = 133/330 (40%), Positives = 166/330 (50%), Gaps = 11/330 (3%)
 Frame = +1

Query: 1   LWPHLKKKKKSYFPTPLY-LXXXXXXXXXXXXXXXXXXXXXXXXXXIDPFSFV-----PK 162
           LWP LKK     +  P+  L                          + PF+F      P 
Sbjct: 28  LWPDLKKPIGKQYSKPVVDLDNDFEADFQEFKDESDADEEDDVMLDVKPFAFSATASPPA 87

Query: 163 STASKKRTAA----VECNVPAEESAKKKRKNQYRGIRQRPWGKWAAEIRDPSKGARIWLG 330
              S  R +A    VE N  AE+SAK+KRKNQYRGIRQRPWGKWAAEIRDP KG R+WLG
Sbjct: 88  RNRSSSRGSAAVKSVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLG 147

Query: 331 TFKTAEEAARAYDTEARRIRGEKAKLNFPSEVPLCAEKETVNSNPQKPLCQASPLLDDKD 510
           TF TAEEAARAYD EARRIRG+KAK+NFP E P  + K    +N QK L + +       
Sbjct: 148 TFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPHASPKRPSKANSQKSLGKTNL------ 201

Query: 511 IFGVEQKLVKSNPQKLIKXXXXXXXXXXXXXDGRFSKCLGIVEEVP-VNESGFVSFPMIQ 687
               E      NP++                   +   +G VEE P V++ G +    + 
Sbjct: 202 ---AENLNYLDNPEQ------------------DYFNSMGFVEEKPPVSQFGIMDSLPVN 240

Query: 688 NPIEFNSLTPSSGGSLHFKSDQESNTINHSDFGWGDYQSKTPEISSGLSTTLENELPFFL 867
                NS+TPS    ++F SDQ SN+   SD GW +  +KTPEISS LS T E +   F+
Sbjct: 241 GDAVVNSITPSDNVPMYFNSDQGSNSFECSDIGWAEQAAKTPEISSVLSATPEIDESLFI 300

Query: 868 DDANLNVKPVSVSKGEGSTEEISTQKLPAE 957
           +DAN   K  S S  E   EE + + L  E
Sbjct: 301 EDANPKKKLKSDSGNEAPAEENNGKSLSDE 330


>gb|ADE41104.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 387

 Score =  203 bits (517), Expect = 4e-50
 Identities = 114/243 (46%), Positives = 144/243 (59%), Gaps = 2/243 (0%)
 Frame = +1

Query: 157 PKSTASKKRTAAVECNVPAEESAKKKRKNQYRGIRQRPWGKWAAEIRDPSKGARIWLGTF 336
           P S        +VE N  AE+SAK+KRKNQYRGIRQRPWGKWAAEIRDP KG R+WLGTF
Sbjct: 85  PSSARGSTAVKSVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF 144

Query: 337 KTAEEAARAYDTEARRIRGEKAKLNFPSEVPLCAEKETVNSNPQKPLCQASPLLDDKDIF 516
            TAEEAARAYD EARRIRG+KAK+NFP E P  + K +V +N QK       L+   ++ 
Sbjct: 145 NTAEEAARAYDAEARRIRGKKAKVNFPEETPRASAKRSVKANSQK-------LIPKTNVN 197

Query: 517 GVEQKLVKSNPQKLIKXXXXXXXXXXXXXDGRFSKCLGIVEEVP-VNESGFVSFPMIQNP 693
           G E  L ++                       +   LG ++E P +N  G++S  +    
Sbjct: 198 GTESNLNQN-------------FNFVNDSSQDYYSALGFLDEKPTLNNFGYMSTFLANGD 244

Query: 694 IEFNSLTPSSGGSLHFKSDQESNTINHSDFGWGDYQSKTPEISSGLSTTL-ENELPFFLD 870
           +   S TPS     +  SDQ SN+ + SDFGWG+  SKTPEISS LS+ + E +   FL+
Sbjct: 245 VALKSSTPSDPAPFYLSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEETDDSLFLE 304

Query: 871 DAN 879
           DAN
Sbjct: 305 DAN 307


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