BLASTX nr result

ID: Coptis23_contig00010234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010234
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063858.1| Os09g0549400 [Oryza sativa Japonica Group] g...    90   4e-16
gb|EAZ09987.1| hypothetical protein OsI_32290 [Oryza sativa Indi...    90   4e-16
ref|XP_003562197.1| PREDICTED: heat shock 70 kDa protein, mitoch...    89   8e-16
emb|CBI37655.3| unnamed protein product [Vitis vinifera]               86   9e-15
ref|NP_001140294.1| uncharacterized protein LOC100272339 [Zea ma...    86   9e-15

>ref|NP_001063858.1| Os09g0549400 [Oryza sativa Japonica Group]
           gi|50725125|dbj|BAD33742.1| unknown protein [Oryza
           sativa Japonica Group] gi|113632091|dbj|BAF25772.1|
           Os09g0549400 [Oryza sativa Japonica Group]
           gi|125606540|gb|EAZ45576.1| hypothetical protein
           OsJ_30239 [Oryza sativa Japonica Group]
           gi|215737301|dbj|BAG96230.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 425

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/99 (48%), Positives = 61/99 (61%)
 Frame = +3

Query: 60  SPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDSSSHEEYTQMLRALTSAGRSKHAVELEK 239
           +PA  P+D Q+  +Q + ERF RLQAFL++ + S  EEY  MLR+L+S GRSK A+ELE 
Sbjct: 318 APACYPVDPQRSSNQDWKERFIRLQAFLRNNEQSGQEEYIHMLRSLSSVGRSKLAIELEN 377

Query: 240 RAIHXXXXXXXXXXRMKVLNVLGKASPKDNASPSATPAS 356
           RA+           +MKVLNVL K SP D       PAS
Sbjct: 378 RAVKLLIEEGKELQKMKVLNVLNKLSPTDALPLPTQPAS 416


>gb|EAZ09987.1| hypothetical protein OsI_32290 [Oryza sativa Indica Group]
          Length = 424

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/99 (48%), Positives = 61/99 (61%)
 Frame = +3

Query: 60  SPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDSSSHEEYTQMLRALTSAGRSKHAVELEK 239
           +PA  P+D Q+  +Q + ERF RLQAFL++ + S  EEY  MLR+L+S GRSK A+ELE 
Sbjct: 317 APACYPVDPQRSSNQDWKERFIRLQAFLRNNEQSGQEEYIHMLRSLSSVGRSKLAIELEN 376

Query: 240 RAIHXXXXXXXXXXRMKVLNVLGKASPKDNASPSATPAS 356
           RA+           +MKVLNVL K SP D       PAS
Sbjct: 377 RAVKLLIEEGKELQKMKVLNVLNKLSPTDALPLPTQPAS 415


>ref|XP_003562197.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like
            [Brachypodium distachyon]
          Length = 1115

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
 Frame = +3

Query: 27   LPVRELNHPAGSP-AVIPLDSQKEDDQ--HFMERFHRLQAFLKSYDSSSHEEYTQMLRAL 197
            LPV   N PA +P  ++  D+ +  +Q  ++ ER++RLQ +L++ + SS E Y QMLR+L
Sbjct: 1004 LPVPSANEPAITPDTLVQGDAHRPSNQNAYWSERYNRLQTYLENCNQSSQEGYMQMLRSL 1063

Query: 198  TSAGRSKHAVELEKRAIHXXXXXXXXXXRMKVLNVLGKASPKDNA 332
            ++AGRS HA+ELEKRAIH          RMK LNVLGK SP  ++
Sbjct: 1064 SAAGRSMHAIELEKRAIHLLVEEGKELQRMKALNVLGKNSPNGSS 1108


>emb|CBI37655.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 53/115 (46%), Positives = 64/115 (55%)
 Frame = +3

Query: 6   LGKPVDALPVRELNHPAGSPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDSSSHEEYTQM 185
           LGKPV+        H A S      +SQ   + H+ ER  +L+A+LK  D S+ E Y Q 
Sbjct: 33  LGKPVNG------PHGANSEVSCSENSQDVANMHWGERLIQLEAYLKDCDHSNQEAYVQK 86

Query: 186 LRALTSAGRSKHAVELEKRAIHXXXXXXXXXXRMKVLNVLGKASPKDNASPSATP 350
           LR+ TSA RS+HAVELEKRAIH          R+K LNVLGK   K N  P  TP
Sbjct: 87  LRSFTSAERSRHAVELEKRAIHLFLEEGRELERIKALNVLGKYDTK-NVPPQLTP 140


>ref|NP_001140294.1| uncharacterized protein LOC100272339 [Zea mays]
           gi|194698882|gb|ACF83525.1| unknown [Zea mays]
           gi|194699504|gb|ACF83836.1| unknown [Zea mays]
           gi|223975621|gb|ACN31998.1| unknown [Zea mays]
           gi|413917973|gb|AFW57905.1| hypothetical protein
           ZEAMMB73_708775 [Zea mays] gi|413917974|gb|AFW57906.1|
           hypothetical protein ZEAMMB73_708775 [Zea mays]
           gi|413917975|gb|AFW57907.1| hypothetical protein
           ZEAMMB73_708775 [Zea mays]
          Length = 216

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 46/101 (45%), Positives = 64/101 (63%)
 Frame = +3

Query: 51  PAGSPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDSSSHEEYTQMLRALTSAGRSKHAVE 230
           P  S   I  + ++   +++ ERF+RLQ +L++ D S+ E Y + LR+L++AGR+ HA+E
Sbjct: 116 PVASSTGIQEEVKRSSIEYWNERFNRLQTYLENCDHSTQEGYLRKLRSLSAAGRNMHAIE 175

Query: 231 LEKRAIHXXXXXXXXXXRMKVLNVLGKASPKDNASPSATPA 353
           LEKRAIH          RMK LNVLGK SP  NAS   TP+
Sbjct: 176 LEKRAIHLLMEEGKELQRMKALNVLGKVSP--NASSKLTPS 214


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