BLASTX nr result

ID: Coptis23_contig00010232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010232
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270513.1| PREDICTED: uncharacterized protein LOC100256...   146   6e-33
emb|CBI18358.3| unnamed protein product [Vitis vinifera]              142   8e-32
ref|NP_001143276.1| uncharacterized protein LOC100275809 precurs...   140   4e-31
ref|XP_004140725.1| PREDICTED: uncharacterized protein LOC101203...   139   9e-31
ref|XP_002310898.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-31

>ref|XP_002270513.1| PREDICTED: uncharacterized protein LOC100256402 [Vitis vinifera]
          Length = 172

 Score =  146 bits (368), Expect = 6e-33
 Identities = 76/127 (59%), Positives = 86/127 (67%), Gaps = 21/127 (16%)
 Frame = -3

Query: 495 WLSSPAKSAAVLLLVMVFSGTAAA----------------ETLSGE-----DYKKARIQH 379
           W   PA +AA L+   +   TA A                +TLSGE     D KKARIQ 
Sbjct: 46  WYGRPAAAAAGLVAAAMMFSTAWAWRSGAIEAPETLSNIPQTLSGECPSVQDCKKARIQR 105

Query: 378 PKSKDAERCTVKCVTTCIRGGAGSPGEGPLNARRPLVVFKEGFHSRKYCLVECSDICNLL 199
           PKS+ AE CT+KCVTTCIRGG GSPGEGPLN RRPLVVFK+GF SR+YCLVECSDICNL+
Sbjct: 106 PKSRKAESCTIKCVTTCIRGGDGSPGEGPLNIRRPLVVFKQGFRSRQYCLVECSDICNLI 165

Query: 198 KDGEDGP 178
            DG+DGP
Sbjct: 166 GDGDDGP 172


>emb|CBI18358.3| unnamed protein product [Vitis vinifera]
          Length = 110

 Score =  142 bits (358), Expect = 8e-32
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 5/87 (5%)
 Frame = -3

Query: 423 ETLSGE-----DYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNARRPLVVFK 259
           +TLSGE     D KKARIQ PKS+ AE CT+KCVTTCIRGG GSPGEGPLN RRPLVVFK
Sbjct: 24  QTLSGECPSVQDCKKARIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPLNIRRPLVVFK 83

Query: 258 EGFHSRKYCLVECSDICNLLKDGEDGP 178
           +GF SR+YCLVECSDICNL+ DG+DGP
Sbjct: 84  QGFRSRQYCLVECSDICNLIGDGDDGP 110


>ref|NP_001143276.1| uncharacterized protein LOC100275809 precursor [Zea mays]
           gi|195616942|gb|ACG30301.1| hypothetical protein [Zea
           mays]
          Length = 114

 Score =  140 bits (352), Expect = 4e-31
 Identities = 67/114 (58%), Positives = 81/114 (71%), Gaps = 9/114 (7%)
 Frame = -3

Query: 492 LSSPAKSAAVLLLVMVFSGTAAAE---------TLSGEDYKKARIQHPKSKDAERCTVKC 340
           +S+PA  A V L +     T A +         TLSG D K+ RI+HP+S  A +CT KC
Sbjct: 1   MSAPAAQAVVALALAAILSTTAPQADTFSNVPPTLSGGDGKQERIKHPRSAKALQCTTKC 60

Query: 339 VTTCIRGGAGSPGEGPLNARRPLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 178
           V TCIRGG G+PGEGPLN RRPLVVFK+GF SR+YCL+ECSDICN +KDG+DGP
Sbjct: 61  VGTCIRGGGGAPGEGPLNVRRPLVVFKDGFRSRQYCLIECSDICNRIKDGQDGP 114


>ref|XP_004140725.1| PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus]
           gi|449486623|ref|XP_004157350.1| PREDICTED:
           uncharacterized protein LOC101224914 [Cucumis sativus]
          Length = 171

 Score =  139 bits (349), Expect = 9e-31
 Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 5/87 (5%)
 Frame = -3

Query: 423 ETLSGE-----DYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNARRPLVVFK 259
           +TLSGE     D KKARIQ PKS+ AE CT+KCV TCIRGG GSPGEGPLN RRP+VVFK
Sbjct: 85  QTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFK 144

Query: 258 EGFHSRKYCLVECSDICNLLKDGEDGP 178
           +GF SR+YCLVECSDICNL+ DG+DGP
Sbjct: 145 QGFRSRQYCLVECSDICNLIGDGDDGP 171


>ref|XP_002310898.1| predicted protein [Populus trichocarpa] gi|222853801|gb|EEE91348.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  139 bits (349), Expect = 9e-31
 Identities = 75/153 (49%), Positives = 96/153 (62%), Gaps = 5/153 (3%)
 Frame = -3

Query: 621 STTTKTNYKLLFCWNWNQNQKDHLAKQNNIITKPNKTA-----RPMWWLSSPAKSAAVLL 457
           +TT+ ++Y L      + N    + K    IT+ +  A      P       A++  +  
Sbjct: 12  NTTSTSSYILAGAVKSSSN----INKSTGYITRGSAAAGASIEAPQQQQQQQAETETLSN 67

Query: 456 LVMVFSGTAAAETLSGEDYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNARR 277
           +    SG   A ++S +D KKARIQ PKS+ AE CT+KCVTTCIRGG GSPGEGPLN RR
Sbjct: 68  IPQTLSGGECA-SVSPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRR 126

Query: 276 PLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 178
           P+VVFK+GF SR YCLVECSDICNL+ D +DGP
Sbjct: 127 PIVVFKQGFRSRNYCLVECSDICNLIGDADDGP 159


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