BLASTX nr result

ID: Coptis23_contig00010227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010227
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517107.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_002517107.1| conserved hypothetical protein [Ricinus communis]
           gi|223543742|gb|EEF45270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1377

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
 Frame = +1

Query: 88  EEIRKYNNNTDNEDEE-------KLFSQLKPYCIKLLDLVQNPSKKNAPEISQLHHFLQQ 246
           E+        D+E EE        +F QLKPYC++LL+LVQNP KK++  I  L  FLQ 
Sbjct: 2   EDFNNLTGENDDESEELVQERKGSVFLQLKPYCLELLELVQNP-KKDSSAIPSLLRFLQS 60

Query: 247 TPSHALQPF 273
           +PS +LQPF
Sbjct: 61  SPSVSLQPF 69


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