BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010223
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15711.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002280556.2| PREDICTED: regulation of nuclear pre-mRNA do...   151   5e-35
ref|XP_002512894.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|XP_002300131.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
emb|CBI21316.3| unnamed protein product [Vitis vinifera]              135   3e-30

>emb|CBI15711.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/136 (57%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
 Frame = -1

Query: 394 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNV--LEKITSSYDVVYNGPVDEESLLS 221
           RG+ILKE ++G+ +EN  K+   +      S  +V  +EKI SSY+ VY  P+DEE+LLS
Sbjct: 121 RGQILKEELMGKTVENNDKNNNNNSYSKNLSFRHVTAVEKIISSYENVYGSPLDEETLLS 180

Query: 220 KCRAAIGCVDRVEKEIGSDCSSGELNSSEFVE---GQHGILSECVEQLRAVESSRATLVS 50
           KCR+AIGC+++ EKEIG D SSG+ N S++VE   GQH IL+EC+EQLR  ESSRA+LVS
Sbjct: 181 KCRSAIGCIEKAEKEIGGDYSSGQFNGSKYVEELQGQHDILTECIEQLRTAESSRASLVS 240

Query: 49  HLREALQEQEIKLEEV 2
           HL+EALQEQE KL++V
Sbjct: 241 HLKEALQEQEFKLDQV 256


>ref|XP_002280556.2| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Vitis vinifera]
          Length = 542

 Score =  151 bits (382), Expect = 5e-35
 Identities = 79/142 (55%), Positives = 103/142 (72%), Gaps = 11/142 (7%)
 Frame = -1

Query: 394 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNV--------LEKITSSYDVVYNGPVD 239
           RG+ILKE ++G+ +EN  K+   +      S  +V        LEKI SSY+ VY  P+D
Sbjct: 121 RGQILKEELMGKTVENNDKNNNNNSYSKNLSFRHVSAIISMMSLEKIISSYENVYGSPLD 180

Query: 238 EESLLSKCRAAIGCVDRVEKEIGSDCSSGELNSSEFVE---GQHGILSECVEQLRAVESS 68
           EE+LLSKCR+AIGC+++ EKEIG D SSG+ N S++VE   GQH IL+EC+EQLR  ESS
Sbjct: 181 EETLLSKCRSAIGCIEKAEKEIGGDYSSGQFNGSKYVEELQGQHDILTECIEQLRTAESS 240

Query: 67  RATLVSHLREALQEQEIKLEEV 2
           RA+LVSHL+EALQEQE KL++V
Sbjct: 241 RASLVSHLKEALQEQEFKLDQV 262


>ref|XP_002512894.1| conserved hypothetical protein [Ricinus communis]
           gi|223547905|gb|EEF49397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 522

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/134 (54%), Positives = 98/134 (73%), Gaps = 3/134 (2%)
 Frame = -1

Query: 394 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVYNGPVDEESLLSKC 215
           RG+ILKE +VG++ EN++++ K   LK+KQ  G+ L+KI S Y V+  G VDEE  +SKC
Sbjct: 121 RGQILKEELVGKHSENSNRNGKHLGLKLKQPAGSTLDKIISGYQVLQGGHVDEEVTISKC 180

Query: 214 RAAIGCVDRVEKEIGSDCSSGELNSSEFVE---GQHGILSECVEQLRAVESSRATLVSHL 44
           R+AI C+++ EKEIG     G+ + + FVE   GQH IL + +EQL A+ESSRA+LVSHL
Sbjct: 181 RSAISCLEKAEKEIGGSTDLGKFHGTPFVEELQGQHTILRDSIEQLTAIESSRASLVSHL 240

Query: 43  REALQEQEIKLEEV 2
           REAL EQE KLE+V
Sbjct: 241 REALHEQESKLEQV 254


>ref|XP_002300131.1| predicted protein [Populus trichocarpa] gi|222847389|gb|EEE84936.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/134 (52%), Positives = 100/134 (74%), Gaps = 3/134 (2%)
 Frame = -1

Query: 394 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVYNGPVDEESLLSKC 215
           RG+ILKE +VG+ +EN +++ K    K+KQ  G+ ++KI +SY VVY G +DE+++ S C
Sbjct: 87  RGQILKEELVGKQVENNNRNGKHIGTKMKQPTGSTIDKIVASYHVVYGGQMDEDAVFSNC 146

Query: 214 RAAIGCVDRVEKEIGSDCSSGELNSSEFVE---GQHGILSECVEQLRAVESSRATLVSHL 44
           R AI  +++V+KEIG D +SG+ + + FVE   GQH IL   +EQL A+ESSRA+LVS+L
Sbjct: 147 RNAISSLEKVDKEIGGDFNSGQFHGAAFVEELQGQHAILRGSIEQLTAIESSRASLVSYL 206

Query: 43  REALQEQEIKLEEV 2
           REALQEQE KLE+V
Sbjct: 207 REALQEQESKLEQV 220


>emb|CBI21316.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  135 bits (341), Expect = 3e-30
 Identities = 73/134 (54%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
 Frame = -1

Query: 394 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVYNGPVDEESLLSKC 215
           RG+ILKE   GR LEN++++ K    K+KQS GN LEKI S Y V+Y G +DE+ +L KC
Sbjct: 121 RGQILKEEFGGRQLENSNRNGKHLGFKLKQSAGNTLEKIVSGYQVIYGGQLDEDVILRKC 180

Query: 214 RAAIGCVDRVEKEIGSDCSSGELNSSEFVE---GQHGILSECVEQLRAVESSRATLVSHL 44
             AI  V++ +K I    +S + N S FVE   GQH IL +C+EQL  VESSRA+LVS+L
Sbjct: 181 TNAISYVEKADKGIDGGINSAQQNGSGFVEELQGQHTILRDCIEQLTLVESSRASLVSNL 240

Query: 43  REALQEQEIKLEEV 2
           REALQEQE KL++V
Sbjct: 241 REALQEQEFKLDQV 254