BLASTX nr result

ID: Coptis23_contig00010215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010215
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530599.1| branched-chain amino acid aminotransferase, ...   550   e-154
ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotr...   548   e-153
ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycin...   546   e-153
ref|XP_003611530.1| Branched-chain-amino-acid aminotransferase [...   543   e-152
gb|ABW76425.1| branched-chain aminotransferase [Nicotiana bentha...   541   e-151

>ref|XP_002530599.1| branched-chain amino acid aminotransferase, putative [Ricinus
            communis] gi|223529847|gb|EEF31779.1| branched-chain
            amino acid aminotransferase, putative [Ricinus communis]
          Length = 417

 Score =  550 bits (1418), Expect = e-154
 Identities = 273/346 (78%), Positives = 302/346 (87%)
 Frame = +2

Query: 116  TLSTETLELANISWDDLGFGLVETDYMYVTKCSIDGDFSKGELLRFGNIELSPSSGVLNY 295
            T  ++T ELA+I WD+LGF  V TDYMY+ KC  DG FS G L RFGNIELSPS+GVLNY
Sbjct: 73   TYGSQTTELADIDWDNLGFAYVPTDYMYIMKCVRDGSFSSGGLQRFGNIELSPSAGVLNY 132

Query: 296  GQGLFEGMKAYRKKDGSILLFRPEENAMRMRMGAERMCMPSPTVEQFVEAVKLTVLANKR 475
            GQGLFEG+KAYRK+DG+ILLFRPEENA+RM++GAERMCMPSPTVEQFVEAVK TVLANKR
Sbjct: 133  GQGLFEGLKAYRKEDGNILLFRPEENALRMKIGAERMCMPSPTVEQFVEAVKATVLANKR 192

Query: 476  WVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLVVENEYH 655
            WVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG+A INL+VE+E H
Sbjct: 193  WVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAAINLIVEHELH 252

Query: 656  RATPXXXXXXXXXXNYAPVLKAQSAAKAKGYSDVLYLDSVHKRYLEEVSSCNVFVVKGRT 835
            RATP          NYA VLKAQS AKAKGYSDVLYLD VHK+YLEEVSSCN+F+VK + 
Sbjct: 253  RATPGGTGSVKTIGNYAAVLKAQSVAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDKV 312

Query: 836  IFTPEIKGTILPGITRKSIIDVARKQGFLVEERPVAVEELLAADEVFCTGTAVVVSPVGS 1015
            I TP +KGTILPGITRKSIIDVAR QGF VEERPVAV+ELL ADEVFCTGTAVVVSPVGS
Sbjct: 313  ISTPAVKGTILPGITRKSIIDVARSQGFQVEERPVAVDELLDADEVFCTGTAVVVSPVGS 372

Query: 1016 ITYLGKRVSYGGENGVGAVAQQLYSSLTSLQMGQTDDPMGWTVQLN 1153
            ITY+G+RVSY GE+G GAV+QQLY+ LT LQMG T+D M WT++LN
Sbjct: 373  ITYMGRRVSY-GESGFGAVSQQLYTVLTRLQMGLTEDRMNWTIELN 417


>ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotransferase 3,
            chloroplastic-like [Glycine max]
          Length = 406

 Score =  548 bits (1412), Expect = e-153
 Identities = 274/342 (80%), Positives = 301/342 (88%)
 Frame = +2

Query: 125  TETLELANISWDDLGFGLVETDYMYVTKCSIDGDFSKGELLRFGNIELSPSSGVLNYGQG 304
            +ET+ELA+I WD+LGFGL  TDYMY+ KC+  G FSKGEL RFGNIEL+PS+GVLNYGQG
Sbjct: 66   SETIELADIEWDNLGFGLQPTDYMYIMKCTRGGTFSKGELQRFGNIELNPSAGVLNYGQG 125

Query: 305  LFEGMKAYRKKDGSILLFRPEENAMRMRMGAERMCMPSPTVEQFVEAVKLTVLANKRWVP 484
            LFEG+KAYRK+DGSILLFRPEEN +RM++GAERMCMPSPT+EQFVEAVK TVLANKRWVP
Sbjct: 126  LFEGLKAYRKQDGSILLFRPEENGLRMQIGAERMCMPSPTMEQFVEAVKDTVLANKRWVP 185

Query: 485  PPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLVVENEYHRAT 664
            P GKGSLYIRPLLMGSG VLG+APAPEYTFLIYVSPVGNYFKEGLAPINL+VENE+HRAT
Sbjct: 186  PAGKGSLYIRPLLMGSGPVLGVAPAPEYTFLIYVSPVGNYFKEGLAPINLIVENEFHRAT 245

Query: 665  PXXXXXXXXXXNYAPVLKAQSAAKAKGYSDVLYLDSVHKRYLEEVSSCNVFVVKGRTIFT 844
            P          NYA VLKAQS AKAKGYSDVLYLD VHKRYLEEVSSCN+FVVKG  I T
Sbjct: 246  PGGTGGVKTIGNYAAVLKAQSEAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNIIST 305

Query: 845  PEIKGTILPGITRKSIIDVARKQGFLVEERPVAVEELLAADEVFCTGTAVVVSPVGSITY 1024
            P IKGTILPGITRKSIIDVAR +GF VEER V+V+ELL ADEVFCTGTAVVVSPVGSITY
Sbjct: 306  PAIKGTILPGITRKSIIDVARSEGFQVEERLVSVDELLDADEVFCTGTAVVVSPVGSITY 365

Query: 1025 LGKRVSYGGENGVGAVAQQLYSSLTSLQMGQTDDPMGWTVQL 1150
            LGKRV+YG  +G+G VAQQLY+ LT LQMG T+D M WTV+L
Sbjct: 366  LGKRVTYG--DGIGVVAQQLYTVLTRLQMGLTEDEMNWTVEL 405


>ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max]
            gi|255635824|gb|ACU18260.1| unknown [Glycine max]
          Length = 412

 Score =  546 bits (1406), Expect = e-153
 Identities = 276/341 (80%), Positives = 297/341 (87%)
 Frame = +2

Query: 128  ETLELANISWDDLGFGLVETDYMYVTKCSIDGDFSKGELLRFGNIELSPSSGVLNYGQGL 307
            ET+ELA+I WD+LGFGL  TDYMY  KC+  G FSKGEL RFGNIEL+PS+GVLNYGQGL
Sbjct: 73   ETIELADIEWDNLGFGLQPTDYMYSMKCTRGGTFSKGELQRFGNIELNPSAGVLNYGQGL 132

Query: 308  FEGMKAYRKKDGSILLFRPEENAMRMRMGAERMCMPSPTVEQFVEAVKLTVLANKRWVPP 487
            FEG+KAYRK+DGSILLFRPEEN +RM++GAERMCMPSPTVEQFVEAVK TVLANKRWVPP
Sbjct: 133  FEGLKAYRKQDGSILLFRPEENGLRMQIGAERMCMPSPTVEQFVEAVKETVLANKRWVPP 192

Query: 488  PGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLVVENEYHRATP 667
             GKGSLYIRPLLMGSG VLGLAPAPEYTFLIYVSPVGNYFKEGLAPINL+VENE HRATP
Sbjct: 193  AGKGSLYIRPLLMGSGPVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLIVENELHRATP 252

Query: 668  XXXXXXXXXXNYAPVLKAQSAAKAKGYSDVLYLDSVHKRYLEEVSSCNVFVVKGRTIFTP 847
                      NYA VLKAQS AKAKGYSDVLYLD VHKRYLEEVSSCN+FVVKG  I TP
Sbjct: 253  GGTGGVKTIGNYAAVLKAQSEAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTP 312

Query: 848  EIKGTILPGITRKSIIDVARKQGFLVEERPVAVEELLAADEVFCTGTAVVVSPVGSITYL 1027
             IKGTILPGITRKSIIDVAR QGF VEER V+V+ELL ADEVFCTGTAVVVSPVGSITYL
Sbjct: 313  AIKGTILPGITRKSIIDVARSQGFQVEERLVSVDELLDADEVFCTGTAVVVSPVGSITYL 372

Query: 1028 GKRVSYGGENGVGAVAQQLYSSLTSLQMGQTDDPMGWTVQL 1150
             KRV+YG  +G+G VAQQLY+ LT LQMG T+D M WTV+L
Sbjct: 373  DKRVAYG--DGIGVVAQQLYTVLTRLQMGLTEDEMNWTVEL 411


>ref|XP_003611530.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula]
            gi|355512865|gb|AES94488.1| Branched-chain-amino-acid
            aminotransferase [Medicago truncatula]
          Length = 408

 Score =  543 bits (1399), Expect = e-152
 Identities = 274/343 (79%), Positives = 298/343 (86%)
 Frame = +2

Query: 122  STETLELANISWDDLGFGLVETDYMYVTKCSIDGDFSKGELLRFGNIELSPSSGVLNYGQ 301
            ++E +ELA+I WD+LGFGL  TDYMY  KC   G FSKGEL RFGNIEL+PS+GVLNYGQ
Sbjct: 67   ASEAIELADIDWDNLGFGLQPTDYMYFMKCDQGGTFSKGELKRFGNIELNPSAGVLNYGQ 126

Query: 302  GLFEGMKAYRKKDGSILLFRPEENAMRMRMGAERMCMPSPTVEQFVEAVKLTVLANKRWV 481
            GLFEG+KAYRK DG+ILLFRPEENA+RM+ GAERMCMPSP+VEQFVEAVK TVLANKRW+
Sbjct: 127  GLFEGLKAYRKDDGNILLFRPEENALRMKTGAERMCMPSPSVEQFVEAVKDTVLANKRWI 186

Query: 482  PPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLVVENEYHRA 661
            PP GKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINL+VE+E HRA
Sbjct: 187  PPQGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGLAPINLIVESELHRA 246

Query: 662  TPXXXXXXXXXXNYAPVLKAQSAAKAKGYSDVLYLDSVHKRYLEEVSSCNVFVVKGRTIF 841
            TP          NYA VLKAQSAAKAKGYSDVLYLD VHKRYLEEVSSCN+FVVKG  I 
Sbjct: 247  TPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVIS 306

Query: 842  TPEIKGTILPGITRKSIIDVARKQGFLVEERPVAVEELLAADEVFCTGTAVVVSPVGSIT 1021
            TP IKGTILPGITRKSIIDVAR QGF VEER VAV+ELL ADEVFCTGTAVVVSPVGSIT
Sbjct: 307  TPSIKGTILPGITRKSIIDVARSQGFEVEERLVAVDELLEADEVFCTGTAVVVSPVGSIT 366

Query: 1022 YLGKRVSYGGENGVGAVAQQLYSSLTSLQMGQTDDPMGWTVQL 1150
            YLG++ SYG  +GVGAV+QQLY+ LT LQMG  +D M WTV+L
Sbjct: 367  YLGEKKSYG--DGVGAVSQQLYTGLTRLQMGLAEDNMNWTVEL 407


>gb|ABW76425.1| branched-chain aminotransferase [Nicotiana benthamiana]
          Length = 418

 Score =  541 bits (1395), Expect = e-151
 Identities = 283/378 (74%), Positives = 306/378 (80%), Gaps = 6/378 (1%)
 Frame = +2

Query: 35   FSPTSLKLQNRNTXXXXXXXXXXXXXXTL------STETLELANISWDDLGFGLVETDYM 196
            F P  LKLQ ++               TL      S  T ELA+I WD+LGFG + TDYM
Sbjct: 41   FCPLPLKLQKQSHYASYINNNTINNGNTLRVASPASNITSELADIDWDNLGFGFMPTDYM 100

Query: 197  YVTKCSIDGDFSKGELLRFGNIELSPSSGVLNYGQGLFEGMKAYRKKDGSILLFRPEENA 376
            YV KCS   +FSKGEL RFGNIELSPS+G+LNYGQGLFEG+KAYRK DG+ILLFRPEENA
Sbjct: 101  YVMKCSQGENFSKGELQRFGNIELSPSAGILNYGQGLFEGLKAYRKHDGNILLFRPEENA 160

Query: 377  MRMRMGAERMCMPSPTVEQFVEAVKLTVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAP 556
            MR++MGAERMCMP P+VEQFVEAVK TVLAN+RW+PP GKGSLYIRPLLMGSGAVLGLAP
Sbjct: 161  MRLKMGAERMCMPLPSVEQFVEAVKATVLANERWIPPSGKGSLYIRPLLMGSGAVLGLAP 220

Query: 557  APEYTFLIYVSPVGNYFKEGLAPINLVVENEYHRATPXXXXXXXXXXNYAPVLKAQSAAK 736
            APEYTFLIYVSPVGNYFKEGLAPINLVVE E HRATP          NYA VLKAQSAAK
Sbjct: 221  APEYTFLIYVSPVGNYFKEGLAPINLVVETEMHRATPGGTGGVKTVGNYAAVLKAQSAAK 280

Query: 737  AKGYSDVLYLDSVHKRYLEEVSSCNVFVVKGRTIFTPEIKGTILPGITRKSIIDVARKQG 916
            AKGYSDVLYLDSV KRYLEEVSSCNVF+VKG  I TP IKGTILPGITRKSIIDVA  QG
Sbjct: 281  AKGYSDVLYLDSVQKRYLEEVSSCNVFIVKGNLIVTPAIKGTILPGITRKSIIDVALSQG 340

Query: 917  FLVEERPVAVEELLAADEVFCTGTAVVVSPVGSITYLGKRVSYGGENGVGAVAQQLYSSL 1096
            F VEER V+V+ELL ADEVFCTGTAVVVSPVGSIT+ GKRV+Y G NGVG V+QQLYS+L
Sbjct: 341  FEVEERLVSVDELLDADEVFCTGTAVVVSPVGSITHQGKRVTY-GNNGVGIVSQQLYSAL 399

Query: 1097 TSLQMGQTDDPMGWTVQL 1150
            TSLQMG   D MGW V+L
Sbjct: 400  TSLQMGLAKDKMGWIVEL 417


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