BLASTX nr result

ID: Coptis23_contig00010212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010212
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79776.1| hypothetical protein VITISV_013614 [Vitis vinifera]   175   2e-41
emb|CBI39555.3| unnamed protein product [Vitis vinifera]              175   2e-41
ref|XP_002283131.1| PREDICTED: uncharacterized protein LOC100266...   175   2e-41
ref|XP_003556528.1| PREDICTED: uncharacterized protein LOC100794...   171   2e-40
dbj|BAJ96986.1| predicted protein [Hordeum vulgare subsp. vulgare]    168   2e-39

>emb|CAN79776.1| hypothetical protein VITISV_013614 [Vitis vinifera]
          Length = 235

 Score =  175 bits (444), Expect = 2e-41
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = -2

Query: 1122 RYVRVLGAFYLRLTGTDTDVYQYLEPLYNDYRKLRQKLADGRFALTHVDEVIDELLTKDY 943
            +YVR+LGAFYLRLTG DTDVYQYLEPLYNDYRKLR+KL+DG ++LTHVDEVIDELLTKDY
Sbjct: 97   KYVRILGAFYLRLTGIDTDVYQYLEPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDY 156

Query: 942  SCDIAMPRIKKRWTLESIGTLEPRRSALXXXXXXXXXXXXXDQIMIDSEPDTREKDHY 769
            SCD+A+PRIKKRWTLES+GTLEPRRSAL             DQ+M + +    EKD+Y
Sbjct: 157  SCDVALPRIKKRWTLESLGTLEPRRSALEDDFEEEEEKEEDDQLMDELDAGAHEKDYY 214


>emb|CBI39555.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  175 bits (443), Expect = 2e-41
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = -2

Query: 1122 RYVRVLGAFYLRLTGTDTDVYQYLEPLYNDYRKLRQKLADGRFALTHVDEVIDELLTKDY 943
            +YVR+LGAFYLRLTG DTDVYQYLEPLYNDYRKLR+KL+DG ++LTHVDEVIDELLTKDY
Sbjct: 97   KYVRILGAFYLRLTGIDTDVYQYLEPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDY 156

Query: 942  SCDIAMPRIKKRWTLESIGTLEPRRSALXXXXXXXXXXXXXDQIMIDSEPDTREKDHY 769
            SCD+A+PRIKKRWTLES+GTLEPRRSAL             DQ+M + +    EKD+Y
Sbjct: 157  SCDVALPRIKKRWTLESLGTLEPRRSALEDDFEEEEEKEEDDQLMDELDVGAHEKDYY 214


>ref|XP_002283131.1| PREDICTED: uncharacterized protein LOC100266508 [Vitis vinifera]
          Length = 393

 Score =  175 bits (443), Expect = 2e-41
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = -2

Query: 1122 RYVRVLGAFYLRLTGTDTDVYQYLEPLYNDYRKLRQKLADGRFALTHVDEVIDELLTKDY 943
            +YVR+LGAFYLRLTG DTDVYQYLEPLYNDYRKLR+KL+DG ++LTHVDEVIDELLTKDY
Sbjct: 97   KYVRILGAFYLRLTGIDTDVYQYLEPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDY 156

Query: 942  SCDIAMPRIKKRWTLESIGTLEPRRSALXXXXXXXXXXXXXDQIMIDSEPDTREKDHY 769
            SCD+A+PRIKKRWTLES+GTLEPRRSAL             DQ+M + +    EKD+Y
Sbjct: 157  SCDVALPRIKKRWTLESLGTLEPRRSALEDDFEEEEEKEEDDQLMDELDVGAHEKDYY 214



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -3

Query: 386 SSASPRKHED--ENGNVREESXXXXXXXXK-EDGTDHPDPEIAEANRIRASLGMKPLK 222
           SS SPR+  D  E+G  REE         K +DGTDHPDPEIAEANR+RASLG+KPLK
Sbjct: 335 SSTSPRRRGDMPEDGTTREEPRKKKEKKEKKDDGTDHPDPEIAEANRLRASLGLKPLK 392


>ref|XP_003556528.1| PREDICTED: uncharacterized protein LOC100794094 [Glycine max]
          Length = 383

 Score =  171 bits (434), Expect = 2e-40
 Identities = 82/118 (69%), Positives = 96/118 (81%)
 Frame = -2

Query: 1122 RYVRVLGAFYLRLTGTDTDVYQYLEPLYNDYRKLRQKLADGRFALTHVDEVIDELLTKDY 943
            +YVR+LGAFYLR+TG+D DVY+YLEPLYNDYRKLR+KLADG+F LTHVDEVIDELLTKDY
Sbjct: 97   KYVRILGAFYLRITGSDIDVYRYLEPLYNDYRKLRRKLADGQFTLTHVDEVIDELLTKDY 156

Query: 942  SCDIAMPRIKKRWTLESIGTLEPRRSALXXXXXXXXXXXXXDQIMIDSEPDTREKDHY 769
            SCDIA+PR+KKRWTLES+G+LEPRRSAL             +Q + + E    EKDHY
Sbjct: 157  SCDIALPRVKKRWTLESLGSLEPRRSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHY 214



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -3

Query: 386 SSASPRKHED--ENGNVREESXXXXXXXXKEDGTDHPDPEIAEANRIRASLGMKPLK 222
           SS SPR+H D  E+G  +++          +DGTDHPDPEIAEAN++RA+LG+KPL+
Sbjct: 327 SSVSPRRHGDGLEDGEPKKKKKKEKKEKK-DDGTDHPDPEIAEANKLRAALGLKPLR 382


>dbj|BAJ96986.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score =  168 bits (426), Expect = 2e-39
 Identities = 83/117 (70%), Positives = 91/117 (77%)
 Frame = -2

Query: 1122 RYVRVLGAFYLRLTGTDTDVYQYLEPLYNDYRKLRQKLADGRFALTHVDEVIDELLTKDY 943
            +YVRVLGAFYLRLTGT  DVYQYLEPLYNDYRK+RQKL+DG+F LTHVDE IDELLTKDY
Sbjct: 97   KYVRVLGAFYLRLTGTVADVYQYLEPLYNDYRKIRQKLSDGKFTLTHVDEFIDELLTKDY 156

Query: 942  SCDIAMPRIKKRWTLESIGTLEPRRSALXXXXXXXXXXXXXDQIMIDSEPDTREKDH 772
            SCD A+PRI+KRW LE+ GTLEPRRSAL                M   EP+TREKDH
Sbjct: 157  SCDTALPRIQKRWVLEASGTLEPRRSALEDDFEEEEEDKEDGAPMEVDEPNTREKDH 213


Top