BLASTX nr result

ID: Coptis23_contig00010210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010210
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20464.3| unnamed protein product [Vitis vinifera]              513   e-143
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   513   e-143
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...   500   e-139
ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...   476   e-132
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   472   e-130

>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  513 bits (1320), Expect = e-143
 Identities = 252/353 (71%), Positives = 289/353 (81%), Gaps = 4/353 (1%)
 Frame = +3

Query: 15   IKQPASSVVTSPVVGSISDFKIRADXXXXXXXXXXXXXXX---PERLTTSLNSHTKAVNA 185
            +  PA+S   SPV+GSISD  +  D                   ERL+  L SH K+VN 
Sbjct: 157  LPNPAASA--SPVMGSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSHKKSVNT 214

Query: 186  IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGFSLLSCG 362
            IQWSPTHAHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   G S+LSCG
Sbjct: 215  IQWSPTHAHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCG 273

Query: 363  YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 542
            YDCSSRL+DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV E
Sbjct: 274  YDCSSRLIDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHE 333

Query: 543  YMRNLGPILDIEFSNDAKQFISSSDVSKSNATENSIVVWDVLRQVPLSNQVYVEAYSCPC 722
            Y+R LGPILDIEF+ +AKQFISSSDVS SN +ENSIVVWDV RQVPLSNQVYVEAY+CPC
Sbjct: 334  YIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPC 393

Query: 723  IKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASG 902
            I+ HP +  F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+FSLDGEKLASG
Sbjct: 394  IRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASG 453

Query: 903  SSDGCLYLYDYRSSELLRKIKAYEQACIDIAFHPKLPNVIASCSWSGDVSVFE 1061
            SSDGC+YLYDYRSSEL++KIKAYEQACID+AFHP LPNVIA+C W G VSVFE
Sbjct: 454  SSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 506


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  513 bits (1320), Expect = e-143
 Identities = 252/353 (71%), Positives = 289/353 (81%), Gaps = 4/353 (1%)
 Frame = +3

Query: 15   IKQPASSVVTSPVVGSISDFKIRADXXXXXXXXXXXXXXX---PERLTTSLNSHTKAVNA 185
            +  PA+S   SPV+GSISD  +  D                   ERL+  L SH K+VN 
Sbjct: 69   LPNPAASA--SPVMGSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSHKKSVNT 126

Query: 186  IQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGFSLLSCG 362
            IQWSPTHAHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   G S+LSCG
Sbjct: 127  IQWSPTHAHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCG 185

Query: 363  YDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQE 542
            YDCSSRL+DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV E
Sbjct: 186  YDCSSRLIDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHE 245

Query: 543  YMRNLGPILDIEFSNDAKQFISSSDVSKSNATENSIVVWDVLRQVPLSNQVYVEAYSCPC 722
            Y+R LGPILDIEF+ +AKQFISSSDVS SN +ENSIVVWDV RQVPLSNQVYVEAY+CPC
Sbjct: 246  YIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPC 305

Query: 723  IKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASG 902
            I+ HP +  F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+FSLDGEKLASG
Sbjct: 306  IRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASG 365

Query: 903  SSDGCLYLYDYRSSELLRKIKAYEQACIDIAFHPKLPNVIASCSWSGDVSVFE 1061
            SSDGC+YLYDYRSSEL++KIKAYEQACID+AFHP LPNVIA+C W G VSVFE
Sbjct: 366  SSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 418


>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  500 bits (1288), Expect = e-139
 Identities = 236/310 (76%), Positives = 273/310 (88%), Gaps = 1/310 (0%)
 Frame = +3

Query: 135  PERLTTSLNSHTKAVNAIQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAA 311
            P+RL   L SHTKAVNA+ WSP+HAHLLASAGMD  VCVWNVWS + Q+ AR+F YHNAA
Sbjct: 100  PKRLAVDLRSHTKAVNALDWSPSHAHLLASAGMDQTVCVWNVWSRD-QKIARLFRYHNAA 158

Query: 312  VKHLRWSHDGFSLLSCGYDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGS 491
            VK ++WS  G S+LSCGYDCSSRL+DVEKGI+TQ+FKEDQV+GVIKF PDN ++F+SGGS
Sbjct: 159  VKDVKWSPQGLSVLSCGYDCSSRLIDVEKGIETQIFKEDQVVGVIKFCPDNSNIFLSGGS 218

Query: 492  KGLLRLWDIRVGRVVQEYMRNLGPILDIEFSNDAKQFISSSDVSKSNATENSIVVWDVLR 671
            KG LRLWDIR G VV+EY+R LGPILD+EF+ + KQFISSSDVS SN +ENSI+VWDV R
Sbjct: 219  KGCLRLWDIRNGNVVREYIRGLGPILDVEFTINGKQFISSSDVSGSNLSENSIIVWDVSR 278

Query: 672  QVPLSNQVYVEAYSCPCIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSG 851
            QVPLSNQVYVEAY+CP ++ HPFE  FVAQSN NYIAIFSS+ PF+LDKYKRYE+HGVSG
Sbjct: 279  QVPLSNQVYVEAYTCPSVRCHPFEPCFVAQSNANYIAIFSSSPPFRLDKYKRYESHGVSG 338

Query: 852  FPVKCDFSLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDIAFHPKLPNVIASC 1031
            FPVKC+FSLDGEKL SGSSDGC+Y+Y+YRSSEL+RKIK YEQACID+ FHP LPNVI SC
Sbjct: 339  FPVKCNFSLDGEKLVSGSSDGCIYIYNYRSSELIRKIKVYEQACIDVVFHPVLPNVIGSC 398

Query: 1032 SWSGDVSVFE 1061
            SW+GDVS+FE
Sbjct: 399  SWNGDVSIFE 408


>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score =  476 bits (1225), Expect = e-132
 Identities = 215/309 (69%), Positives = 272/309 (88%), Gaps = 1/309 (0%)
 Frame = +3

Query: 138  ERLTTSLNSHTKAVNAIQWSPTHAHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAV 314
            E+L+ +L  HTKAVNAI WS +HAHLLASAGMD+ VC+WNVWS   Q+KA V N+HNAAV
Sbjct: 52   EKLSATLYGHTKAVNAIHWSSSHAHLLASAGMDHAVCIWNVWS-RNQKKACVLNFHNAAV 110

Query: 315  KHLRWSHDGFSLLSCGYDCSSRLVDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSK 494
            K ++WS  G  LLSCGYDC+SRL+DVEKG++TQ+F+EDQ++GVIKFHPDN +LF+SGGSK
Sbjct: 111  KDVKWSQQGHFLLSCGYDCTSRLIDVEKGLETQVFREDQIVGVIKFHPDNSNLFLSGGSK 170

Query: 495  GLLRLWDIRVGRVVQEYMRNLGPILDIEFSNDAKQFISSSDVSKSNATENSIVVWDVLRQ 674
            G ++LWD R G++V  Y RNLGPILD+EF+ + KQFISSSDVS+SNA+EN+I+VWDV R+
Sbjct: 171  GQVKLWDARTGKIVHNYNRNLGPILDVEFTMNGKQFISSSDVSQSNASENAIIVWDVSRE 230

Query: 675  VPLSNQVYVEAYSCPCIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGF 854
            +PLSNQVYVEAY+CPC++ HPF+ +FVAQSNGNY+AIF++N P++L+K KRYE H VSGF
Sbjct: 231  IPLSNQVYVEAYTCPCVRRHPFDSTFVAQSNGNYVAIFTTNPPYRLNKCKRYEGHVVSGF 290

Query: 855  PVKCDFSLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDIAFHPKLPNVIASCS 1034
            PVKC+FSLDG+KLASGSSDG +YLYDY+SS++++KIKA++QACID+AFHP +PNVIASCS
Sbjct: 291  PVKCNFSLDGKKLASGSSDGSIYLYDYQSSKVVKKIKAHDQACIDVAFHPVIPNVIASCS 350

Query: 1035 WSGDVSVFE 1061
            W G + VFE
Sbjct: 351  WDGSILVFE 359


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  472 bits (1214), Expect = e-130
 Identities = 224/286 (78%), Positives = 255/286 (89%), Gaps = 1/286 (0%)
 Frame = +3

Query: 207  AHLLASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGFSLLSCGYDCSSRL 383
            AHLLASAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W   G S+LSCGYDCSSRL
Sbjct: 13   AHLLASAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRL 71

Query: 384  VDVEKGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSKGLLRLWDIRVGRVVQEYMRNLGP 563
            +DVEKG+QTQ+F EDQV+GVIK HPDN +LF+SGGSKG LRLWDIR G+VV EY+R LGP
Sbjct: 72   IDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGP 131

Query: 564  ILDIEFSNDAKQFISSSDVSKSNATENSIVVWDVLRQVPLSNQVYVEAYSCPCIKHHPFE 743
            ILDIEF+ +AKQFISSSDVS SN +ENSIVVWDV RQVPLSNQVYVEAY+CPCI+ HP +
Sbjct: 132  ILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSD 191

Query: 744  RSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLY 923
              F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+FSLDGEKLASGSSDGC+Y
Sbjct: 192  PFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASGSSDGCIY 251

Query: 924  LYDYRSSELLRKIKAYEQACIDIAFHPKLPNVIASCSWSGDVSVFE 1061
            LYDYRSSEL++KIKAYEQACID+AFHP LPNVIA+C W G VSVFE
Sbjct: 252  LYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 297


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