BLASTX nr result

ID: Coptis23_contig00010209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010209
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   128   5e-28
ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   128   5e-28
ref|XP_003631814.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 ...   123   2e-26
ref|XP_002282370.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 ...   123   2e-26

>ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = -1

Query: 317 RQSFEVSVSSIKSLLLQNYPSASPALRKSIYSVVCRVATILQTRYTAPGFWLVGKGLFEE 138
           +Q FE ++SS+KSLL  +YPSASP+LRK+ YSVVCRVAT+L+TRY APGFWL G GLF+E
Sbjct: 22  KQKFEDALSSLKSLLRLHYPSASPSLRKTFYSVVCRVATVLKTRYIAPGFWLAGLGLFQE 81

Query: 137 AQRLVTDSSERRHLNTCIAKATQHLLDFENQPEPSQFTRPRYLFE 3
           A  L +DS+E+ HL  CIA+A +HL   EN P+ SQ     YLFE
Sbjct: 82  ALLLTSDSTEKEHLKNCIAQAKEHLDQIENPPDVSQ--NSGYLFE 124


>ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
           max]
          Length = 313

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
 Frame = -1

Query: 317 RQSFEVSVSSIKSLLLQNYPSASPALRKSIYSVVCRVATILQTRYTAPGFWLVGKGLFEE 138
           +Q FE SVSS+K+LL + YPSASPALRKS YSV+CRVAT+L+TRYTAPGFW  G GLFE+
Sbjct: 21  KQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAGLGLFEQ 80

Query: 137 AQRLVTDSSERRHLNTCIAKATQHLLDFENQPEPSQFTRPR-------YLFE 3
           A  LV+D SE+ HL  CIA+A +HL     +  PSQ  RP        YLFE
Sbjct: 81  AHLLVSDPSEKEHLKACIAQAREHL---HLEDNPSQTLRPADNQANRGYLFE 129


>ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
           max]
          Length = 313

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
 Frame = -1

Query: 317 RQSFEVSVSSIKSLLLQNYPSASPALRKSIYSVVCRVATILQTRYTAPGFWLVGKGLFEE 138
           +Q FE SVSS+K+LL + YPSASPALRKS YSV+CRVAT+L+TRYTAPGFW  G GLFE+
Sbjct: 21  KQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAGLGLFEQ 80

Query: 137 AQRLVTDSSERRHLNTCIAKATQHLLDFENQPEPSQFTRPR-------YLFE 3
           A  LV+D SE+ HL  CIA+A +HL     +  PSQ  RP        YLFE
Sbjct: 81  AHLLVSDPSEKEHLKACIAQAREHL---HLEDNPSQTLRPADNQANRGYLFE 129


>ref|XP_003631814.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 isoform 2 [Vitis
           vinifera]
          Length = 312

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
 Frame = -1

Query: 317 RQSFEVSVSSIKSLLLQNYPSASPALRKSIYSVVCRVATILQTRYTAPGFWLVGKGLFEE 138
           +Q FE +V SIKSLL+ +Y S+SP+LRK  YSVVCRVATIL+TRYTAPGFWL G  LFE+
Sbjct: 23  KQMFEEAVLSIKSLLVDHYSSSSPSLRKLFYSVVCRVATILRTRYTAPGFWLSGLRLFEQ 82

Query: 137 AQRLVTDSSERRHLNTCIAKATQHLLDFENQPEPSQFTRPR----YLFE 3
           A+ +VTDSSE+ +L +CIA A Q L   EN  E S+ T  R    YLFE
Sbjct: 83  AESMVTDSSEKENLKSCIAGARQQLNHVENLSEASETTENRANRGYLFE 131


>ref|XP_002282370.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 isoform 1 [Vitis
           vinifera]
          Length = 317

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
 Frame = -1

Query: 317 RQSFEVSVSSIKSLLLQNYPSASPALRKSIYSVVCRVATILQTRYTAPGFWLVGKGLFEE 138
           +Q FE +V SIKSLL+ +Y S+SP+LRK  YSVVCRVATIL+TRYTAPGFWL G  LFE+
Sbjct: 23  KQMFEEAVLSIKSLLVDHYSSSSPSLRKLFYSVVCRVATILRTRYTAPGFWLSGLRLFEQ 82

Query: 137 AQRLVTDSSERRHLNTCIAKATQHLLDFENQPEPSQFTRPR----YLFE 3
           A+ +VTDSSE+ +L +CIA A Q L   EN  E S+ T  R    YLFE
Sbjct: 83  AESMVTDSSEKENLKSCIAGARQQLNHVENLSEASETTENRANRGYLFE 131


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