BLASTX nr result

ID: Coptis23_contig00010208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010208
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331738.1| predicted protein [Populus trichocarpa] gi|1...   184   1e-44
ref|XP_002284690.1| PREDICTED: uncharacterized protein LOC100261...   178   8e-43
ref|XP_002515583.1| conserved hypothetical protein [Ricinus comm...   177   2e-42
gb|AFK43199.1| unknown [Lotus japonicus]                              177   2e-42
ref|NP_001238415.1| uncharacterized protein LOC100500202 precurs...   171   1e-40

>ref|XP_002331738.1| predicted protein [Populus trichocarpa] gi|118487434|gb|ABK95545.1|
           unknown [Populus trichocarpa]
           gi|222874264|gb|EEF11395.1| predicted protein [Populus
           trichocarpa]
          Length = 150

 Score =  184 bits (467), Expect = 1e-44
 Identities = 88/135 (65%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
 Frame = +2

Query: 68  LAILSLTIFSLLIQSTSPTA-HDELKANNFPIGLLPTNVLSYTLNKTSGDFSVNLGDTCK 244
           L +L +T  S   +   PTA H EL    FPIGLLP++V +YT N+TSG+FSV+LG  CK
Sbjct: 10  LILLPITFTSQSEKQKPPTAAHTELTNYGFPIGLLPSSVKNYTFNQTSGEFSVDLGSACK 69

Query: 245 LTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLVFEVGMVS 424
           +TLPPDNYLA+YSK+V+GK+VE +I  L+GIRVRAF++WWSITGI SSGDNLVFEVGM++
Sbjct: 70  ITLPPDNYLATYSKRVSGKIVEGRIAELDGIRVRAFFKWWSITGISSSGDNLVFEVGMIT 129

Query: 425 AKYPSKNFDQMPSCE 469
           AKYPSKNFD+ P CE
Sbjct: 130 AKYPSKNFDESPQCE 144


>ref|XP_002284690.1| PREDICTED: uncharacterized protein LOC100261125 isoform 1 [Vitis
           vinifera] gi|359484606|ref|XP_003633129.1| PREDICTED:
           uncharacterized protein LOC100261125 isoform 2 [Vitis
           vinifera] gi|359484608|ref|XP_003633130.1| PREDICTED:
           uncharacterized protein LOC100261125 isoform 3 [Vitis
           vinifera]
          Length = 157

 Score =  178 bits (452), Expect = 8e-43
 Identities = 90/148 (60%), Positives = 109/148 (73%), Gaps = 14/148 (9%)
 Frame = +2

Query: 68  LAILSLTIFSLLIQSTS----PT----------AHDELKANNFPIGLLPTNVLSYTLNKT 205
           L IL L IF +L   +S    PT          AH EL    FP+GLLPTNV+ Y++N+T
Sbjct: 4   LTILPLLIFFILFPHSSSDPNPTSKTLDSNVSAAHAELSNYGFPVGLLPTNVVDYSINQT 63

Query: 206 SGDFSVNLGDTCKLTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKS 385
           SG+FSVNLG +CK TLPPDNYLA+YS K++GK+V   I  L GIRVRAF+QWWSITGI+S
Sbjct: 64  SGEFSVNLGYSCKFTLPPDNYLATYSPKISGKIVHGHIASLAGIRVRAFFQWWSITGIRS 123

Query: 386 SGDNLVFEVGMVSAKYPSKNFDQMPSCE 469
           SGDNLVFEVG+V+AKYP+KNF + P CE
Sbjct: 124 SGDNLVFEVGVVTAKYPAKNFHETPVCE 151


>ref|XP_002515583.1| conserved hypothetical protein [Ricinus communis]
           gi|223545527|gb|EEF47032.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score =  177 bits (449), Expect = 2e-42
 Identities = 90/146 (61%), Positives = 112/146 (76%), Gaps = 10/146 (6%)
 Frame = +2

Query: 62  KKLAILSLTIFSLLI-----QST-----SPTAHDELKANNFPIGLLPTNVLSYTLNKTSG 211
           K L++LSL +  L++     QST        AH EL    FPIGLLP +V++Y LN+TSG
Sbjct: 3   KLLSLLSLLLLLLVLVPLSSQSTIAGNPPSAAHTELTNYGFPIGLLPASVVNYNLNQTSG 62

Query: 212 DFSVNLGDTCKLTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSG 391
           DFSVN G +CK+TLPPDNYLA+YSKKVTGK+V  +I  L+GIRV AF++WWSITGI+SSG
Sbjct: 63  DFSVNFGGSCKITLPPDNYLATYSKKVTGKIVAGRIAELDGIRVWAFFKWWSITGIRSSG 122

Query: 392 DNLVFEVGMVSAKYPSKNFDQMPSCE 469
           ++LVFEVGMV+AKYPSKNF + P CE
Sbjct: 123 EDLVFEVGMVTAKYPSKNFLESPQCE 148


>gb|AFK43199.1| unknown [Lotus japonicus]
          Length = 156

 Score =  177 bits (448), Expect = 2e-42
 Identities = 82/122 (67%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
 Frame = +2

Query: 107 QSTSPTAHDELKANNFPIGLLP-TNVLSYTLNKTSGDFSVNLGDTCKLTLPPDNYLASYS 283
           +ST  +AH EL    FP+GLLP T VL + +N+TSGDFSV LG  C++TLPPDNY+A+YS
Sbjct: 29  KSTPSSAHIELTNYGFPVGLLPDTTVLGFAVNQTSGDFSVRLGGACRITLPPDNYVATYS 88

Query: 284 KKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLVFEVGMVSAKYPSKNFDQMPS 463
             +TGK+V+ +I  LNGIRVRAF+QWWSITGI+SSGDN+VFEVGMV+AKYPSKNFD  P+
Sbjct: 89  NTITGKIVKGRIAELNGIRVRAFFQWWSITGIRSSGDNIVFEVGMVTAKYPSKNFDDSPA 148

Query: 464 CE 469
           CE
Sbjct: 149 CE 150


>ref|NP_001238415.1| uncharacterized protein LOC100500202 precursor [Glycine max]
           gi|255629688|gb|ACU15193.1| unknown [Glycine max]
          Length = 156

 Score =  171 bits (434), Expect = 1e-40
 Identities = 81/122 (66%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
 Frame = +2

Query: 107 QSTSPTAHDELKANNFPIGLLP-TNVLSYTLNKTSGDFSVNLGDTCKLTLPPDNYLASYS 283
           +STS  AH EL  +  P GLLP T VL Y +N+TSGDF+V LG  CK+TLPPDNY+A+YS
Sbjct: 29  KSTSSQAHVELINHGLPAGLLPATTVLGYAVNRTSGDFTVKLGGACKITLPPDNYVATYS 88

Query: 284 KKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLVFEVGMVSAKYPSKNFDQMPS 463
             +TGK+V+ KI  L GIRVRAF++WWSITGI+SSGD++VFEVGMV+AKYPSKNFD  P+
Sbjct: 89  DTITGKIVKGKIAELEGIRVRAFFKWWSITGIRSSGDDIVFEVGMVTAKYPSKNFDDSPA 148

Query: 464 CE 469
           CE
Sbjct: 149 CE 150


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