BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010199
         (1698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   704   0.0  
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   690   0.0  
ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2...   636   e-180
ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]...   610   e-172
ref|XP_002864893.1| hypothetical protein ARALYDRAFT_496629 [Arab...   605   e-171

>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  704 bits (1816), Expect = 0.0
 Identities = 375/560 (66%), Positives = 402/560 (71%), Gaps = 2/560 (0%)
 Frame = +3

Query: 24   MDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGRGDNRYDGYEQSIPVNEDDEVVDPGES 203
            +DPEIA+TQEERKKMEQQL+SLTSV +D +LYG G N+++ Y  SIPVN+++E VD  + 
Sbjct: 4    IDPEIARTQEERKKMEQQLSSLTSVNYDPELYG-GTNKFEDYVSSIPVNDEEENVDAMDP 62

Query: 204  EVARKLASYTAPKSVLKEMPRXXXXXXXXXXAELGFRKPGKIIXXXXXXXXXXXXXVISP 383
             + R+L SYTAP S+LKEMPR           ++GF+KP +II             VISP
Sbjct: 63   GLGRRLPSYTAPASLLKEMPRGGVEED-----DMGFKKPQRIIDREDDYRRRRLNRVISP 117

Query: 384  DRNDAFAMGDKTPDVSVRTYVDVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 563
            DR+DAFA GDKTPDVSVRTY DVM                                    
Sbjct: 118  DRHDAFASGDKTPDVSVRTYADVMREEALKREKEETLKAIAKKKKEEEEAKEQEKETGG- 176

Query: 564  XDDGAVPAG-QKRRNRWDQSQEXXXXXXXXXXXXXXXXXXWDMPDSTPGIGRWDATPTPG 740
               GAV    QKRRNRWDQSQ+                  WD+PDSTPGIGRWDATPTPG
Sbjct: 177  ---GAVQQPTQKRRNRWDQSQDDGSAKKAKTGSD------WDLPDSTPGIGRWDATPTPG 227

Query: 741  RVADATPSISRRNRWDETPTPGRVVXXXXXXXXXXXXXXXXXX-MTWDATPKLGGLATPT 917
            RVADATPSISRRNRWDETPTPGR+                    MTWDATPKL GLATPT
Sbjct: 228  RVADATPSISRRNRWDETPTPGRLADADATPAAGGATPGATPAGMTWDATPKLAGLATPT 287

Query: 918  PKRQRSRWDETPATMGSATPMPGATPAGSYTPGVTPVGGVELATPTPGAINLRGAMTPEQ 1097
            PKRQRSRWDETPATMGSATPM GATPA +YTPGVTPVGGVELATPTP AINLRGA+TPEQ
Sbjct: 288  PKRQRSRWDETPATMGSATPMAGATPAAAYTPGVTPVGGVELATPTPSAINLRGAITPEQ 347

Query: 1098 YNLLRWEKDIEDRNRPLTDEELDVMFPQEGYKILDPPASYQPIRTPARKXXXXXXXXXXX 1277
            YNLLRWEKDIE+RNRPLTDEELD MFPQEGYKILDPP SY PIRTPARK           
Sbjct: 348  YNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILDPPPSYVPIRTPARKLLATPTPLGTP 407

Query: 1278 XYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGSLLNXXXXXXXXXXXXXXRKIMKLL 1457
             Y IPEENRGQQFDVPKEAPGGLPFMKPEDYQYFG+LLN              RKIMKLL
Sbjct: 408  LYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNDEDEEELSPEEQKERKIMKLL 467

Query: 1458 LKVKNGTPPQRKTALRQLTDKAREFGAGPLFNCILPLLMQPTLEDQERHLLVKVIDRVLY 1637
            LKVKNGTPPQRKTALRQLTDKAREFGAGPLFN ILPLLMQPTLEDQERHLLVKVIDRVLY
Sbjct: 468  LKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLY 527

Query: 1638 KLDELVRPFVHKILVVIEPL 1697
            KLDELVRPFVHKILVVIEPL
Sbjct: 528  KLDELVRPFVHKILVVIEPL 547


>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
            gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
            factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  690 bits (1780), Expect = 0.0
 Identities = 368/558 (65%), Positives = 394/558 (70%)
 Frame = +3

Query: 24   MDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGRGDNRYDGYEQSIPVNEDDEVVDPGES 203
            MD EIAKTQEER+KMEQQLASL SVTFDTDLYG  D    GY  SIPVNEDDE ++   +
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKA--GYVTSIPVNEDDENLESQVN 58

Query: 204  EVARKLASYTAPKSVLKEMPRXXXXXXXXXXAELGFRKPGKIIXXXXXXXXXXXXXVISP 383
             V RKLASYTAPKS+LKEMPR           +LG++KP +II             VISP
Sbjct: 59   VVGRKLASYTAPKSLLKEMPRGVDEDE-----DLGYKKPQRIIDREDDYRKRRLNRVISP 113

Query: 384  DRNDAFAMGDKTPDVSVRTYVDVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 563
            +R+DAFA G+KTPD SVRTY +VM                                    
Sbjct: 114  ERHDAFAAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKEP 173

Query: 564  XDDGAVPAGQKRRNRWDQSQEXXXXXXXXXXXXXXXXXXWDMPDSTPGIGRWDATPTPGR 743
                A P  QKRRNRWDQSQ+                  WD+PD+TPG  RWDATP  GR
Sbjct: 174  LASAAAP--QKRRNRWDQSQDDGGAKKAKTSD-------WDLPDTTPG--RWDATP--GR 220

Query: 744  VADATPSISRRNRWDETPTPGRVVXXXXXXXXXXXXXXXXXXMTWDATPKLGGLATPTPK 923
            V DATP + RRNRWDETPTPGR+                   MTWDATPKL G+ATPTPK
Sbjct: 221  VGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPK 280

Query: 924  RQRSRWDETPATMGSATPMPGATPAGSYTPGVTPVGGVELATPTPGAINLRGAMTPEQYN 1103
            RQRSRWDETPATMGSATPMPGATPA ++TPGVTPVGGVELATPTPGAINLRG MTPEQYN
Sbjct: 281  RQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYN 340

Query: 1104 LLRWEKDIEDRNRPLTDEELDVMFPQEGYKILDPPASYQPIRTPARKXXXXXXXXXXXXY 1283
            L+RWE+DIE+RNRPLTDEELD MFPQEGYKILDPPASY PIRTPARK            Y
Sbjct: 341  LMRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLY 400

Query: 1284 QIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGSLLNXXXXXXXXXXXXXXRKIMKLLLK 1463
             IPEENRGQQFDVPKEAPGGLPFMKPEDYQYFG+LLN              RKIMKLLLK
Sbjct: 401  AIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLK 460

Query: 1464 VKNGTPPQRKTALRQLTDKAREFGAGPLFNCILPLLMQPTLEDQERHLLVKVIDRVLYKL 1643
            VKNGTPPQRKTALRQLTDKAREFGAGPLFN ILPLLMQPTLEDQERHLLVKVIDRVLYKL
Sbjct: 461  VKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKL 520

Query: 1644 DELVRPFVHKILVVIEPL 1697
            DELVRP+VHKILVVIEPL
Sbjct: 521  DELVRPYVHKILVVIEPL 538


>ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1|
            predicted protein [Populus trichocarpa]
          Length = 1267

 Score =  636 bits (1641), Expect = e-180
 Identities = 341/560 (60%), Positives = 381/560 (68%), Gaps = 2/560 (0%)
 Frame = +3

Query: 24   MDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGRGDNRYDGYEQSIPVNEDDEVVDPGES 203
            MDPEIAKTQEERKKMEQQLASLTS+TFD DLYG  D   + YE SIP  +D+E  + G +
Sbjct: 1    MDPEIAKTQEERKKMEQQLASLTSLTFDRDLYGGVDR--NAYETSIPATDDEEP-EVGLN 57

Query: 204  EVARKLASYTAPKSVLKEMPRXXXXXXXXXXAELGFRKPGKIIXXXXXXXXXXXXXVISP 383
            EVA+KLASYTAPKSVLKEMPR             GFRKP +II             +ISP
Sbjct: 58   EVAQKLASYTAPKSVLKEMPRGGDDSEEVN----GFRKPSRIIDREDDYRRRRLDRIISP 113

Query: 384  DRNDAFAMGDKTPDVSVRTYVDVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 563
            +R+D F+ G+KTPD SVRTY D+M                                    
Sbjct: 114  ERHDPFSAGEKTPDPSVRTYSDIMKEESLKRQKEELLREIAKKKKEEEEARAEKGDKGEK 173

Query: 564  XDDGAVPAGQKRRNRWDQSQEXXXXXXXXXXXXXXXXXXWDMPDSTPGIGRWDATPTPGR 743
              +       KRRNRWDQS E                  WD+PD+TPGIGRWDATPTPGR
Sbjct: 174  ESNSMA----KRRNRWDQSMEDGGNAAKKAKTGSD----WDLPDATPGIGRWDATPTPGR 225

Query: 744  VADATPSISRRNRWDETPTPGRVVXXXXXXXXXXXXXXXXXXMTWDATPKLGGLATPTPK 923
            + DATP   R+NRWDETPTPGRV                   +TWD+TPK  G+ TPTPK
Sbjct: 226  IGDATPGAGRKNRWDETPTPGRVADSDATPAGGVTPGATPAGVTWDSTPK--GMVTPTPK 283

Query: 924  RQRSRWDETPATMGSATP-MPGATPA-GSYTPGVTPVGGVELATPTPGAINLRGAMTPEQ 1097
            RQ+SRWDETPA+M SATP + G TP+ G  TPG TP+G +++ATPTP A+ +RGA+TPEQ
Sbjct: 284  RQKSRWDETPASMESATPALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPEQ 343

Query: 1098 YNLLRWEKDIEDRNRPLTDEELDVMFPQEGYKILDPPASYQPIRTPARKXXXXXXXXXXX 1277
            YNLLRWEKDIE+RNRPLTDEELD MFPQEGYKIL+PPASY PIRTPARK           
Sbjct: 344  YNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTP 403

Query: 1278 XYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGSLLNXXXXXXXXXXXXXXRKIMKLL 1457
             Y IP+ENRGQQFD+ +E P GLPFMKPEDYQYFG+LLN              RKIMKLL
Sbjct: 404  LYSIPDENRGQQFDLGQEPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLL 463

Query: 1458 LKVKNGTPPQRKTALRQLTDKAREFGAGPLFNCILPLLMQPTLEDQERHLLVKVIDRVLY 1637
            LKVKNGTPPQRKTALRQLTDKAREFGAGPLFN ILPLLMQPTLEDQERHLLVKVIDRVLY
Sbjct: 464  LKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLY 523

Query: 1638 KLDELVRPFVHKILVVIEPL 1697
            KLDELVRP+VHKILVVIEPL
Sbjct: 524  KLDELVRPYVHKILVVIEPL 543


>ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]
            gi|9759403|dbj|BAB09858.1| nuclear protein-like
            [Arabidopsis thaliana] gi|332010481|gb|AED97864.1|
            putative splicing factor [Arabidopsis thaliana]
          Length = 1269

 Score =  610 bits (1573), Expect = e-172
 Identities = 330/566 (58%), Positives = 370/566 (65%), Gaps = 8/566 (1%)
 Frame = +3

Query: 24   MDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGRGDNRYDGYEQSIPVNEDDEV-VDPGE 200
            +DPEIAKTQEER+KME  LASLTS+TFD DLYG  D     Y  SI  NE+D+  +D   
Sbjct: 4    LDPEIAKTQEERRKMEADLASLTSLTFDRDLYGGNDRA--SYSTSIAPNEEDDANLDTTG 61

Query: 201  SEVARKLASYTAPKSVLKEMPRXXXXXXXXXXAELGFRKPGKIIXXXXXXXXXXXXXVIS 380
            S VA++LASYTAP+S+L ++ R           ++GF+    I              V+S
Sbjct: 62   SLVAQRLASYTAPRSILNDVARPHNEDD-----DVGFKPRQSIAEREGEYRNRRLNRVLS 116

Query: 381  PDRNDAFAMGDKTPDVSVRTYVDVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 560
            PDR DAFAMGDKTPD SVRTY D M                                   
Sbjct: 117  PDRVDAFAMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAAKHQK--- 173

Query: 561  XXDDGAVP-------AGQKRRNRWDQSQEXXXXXXXXXXXXXXXXXXWDMPDSTPGIGRW 719
               D A P       +  KRR+RWD  +E                  WD+PD+ PGIGRW
Sbjct: 174  ---DSAPPPPASSSSSSSKRRHRWDLPEEDGAAAKKAKAASSD----WDLPDAAPGIGRW 226

Query: 720  DATPTPGRVADATPSISRRNRWDETPTPGRVVXXXXXXXXXXXXXXXXXXMTWDATPKLG 899
            DA PTPGRV+DATPS  RRNRWDETPTPGRV                   +TWD      
Sbjct: 227  DA-PTPGRVSDATPSAGRRNRWDETPTPGRVTDSDATPGGGVTPGATPSGVTWD------ 279

Query: 900  GLATPTPKRQRSRWDETPATMGSATPMPGATPAGSYTPGVTPVGGVELATPTPGAINLRG 1079
            GLATPTPKRQRSRWDETPATMGSATPM G TP  +YTPGVTP+GG+++ATPTPG +  RG
Sbjct: 280  GLATPTPKRQRSRWDETPATMGSATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRG 339

Query: 1080 AMTPEQYNLLRWEKDIEDRNRPLTDEELDVMFPQEGYKILDPPASYQPIRTPARKXXXXX 1259
             MTPEQ N+ RWEKDIE+RNRPL+DEELD MFP++GYK+LDPPA+Y PIRTPARK     
Sbjct: 340  PMTPEQLNMQRWEKDIEERNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTP 399

Query: 1260 XXXXXXXYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGSLLNXXXXXXXXXXXXXXR 1439
                   Y IPEENRGQQ+DVP E PGGLPFMKPEDYQYFGSLLN              R
Sbjct: 400  TPMATPGYVIPEENRGQQYDVPPEVPGGLPFMKPEDYQYFGSLLNEENEEELSPEEQKER 459

Query: 1440 KIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNCILPLLMQPTLEDQERHLLVKV 1619
            KIMKLLLKVKNGTPPQRKTALRQLTDKARE GAGPLFN ILPLLMQPTLEDQERHLLVKV
Sbjct: 460  KIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKV 519

Query: 1620 IDRVLYKLDELVRPFVHKILVVIEPL 1697
            IDR+LYKLDE+VRP+VHKILVVIEPL
Sbjct: 520  IDRILYKLDEMVRPYVHKILVVIEPL 545


>ref|XP_002864893.1| hypothetical protein ARALYDRAFT_496629 [Arabidopsis lyrata subsp.
            lyrata] gi|297310728|gb|EFH41152.1| hypothetical protein
            ARALYDRAFT_496629 [Arabidopsis lyrata subsp. lyrata]
          Length = 1264

 Score =  605 bits (1561), Expect = e-171
 Identities = 329/559 (58%), Positives = 368/559 (65%), Gaps = 1/559 (0%)
 Frame = +3

Query: 24   MDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGRGDNRYDGYEQSI-PVNEDDEVVDPGE 200
            +DPEIAKTQEER+KME  LASLTS+  D DLYG  D   D Y  SI P +E+D  +D   
Sbjct: 4    LDPEIAKTQEERRKMEADLASLTSINMDRDLYGGNDR--DSYVTSIAPNDEEDTNLDTTG 61

Query: 201  SEVARKLASYTAPKSVLKEMPRXXXXXXXXXXAELGFRKPGKIIXXXXXXXXXXXXXVIS 380
            S VA++LASYTAP+S+L ++ R           ++GF+    I              V+S
Sbjct: 62   SLVAQRLASYTAPRSLLNDVARPHNEDD-----DVGFKPRQTIAEREGEYRNRRLNRVLS 116

Query: 381  PDRNDAFAMGDKTPDVSVRTYVDVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 560
            PDR DAFAMGDKTPD SVRTY D M                                   
Sbjct: 117  PDRVDAFAMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAKHQKDSAP 176

Query: 561  XXDDGAVPAGQKRRNRWDQSQEXXXXXXXXXXXXXXXXXXWDMPDSTPGIGRWDATPTPG 740
                  VP+  KRR+RWD  +E                  WD+PD+ PGIGRWDA PTPG
Sbjct: 177  PPP---VPSSSKRRHRWDLPEEDGGAAKKAKAASSD----WDLPDAAPGIGRWDA-PTPG 228

Query: 741  RVADATPSISRRNRWDETPTPGRVVXXXXXXXXXXXXXXXXXXMTWDATPKLGGLATPTP 920
            RV+DATPS  RRNRWDETPTPGRV                   +TWD      GLATPTP
Sbjct: 229  RVSDATPSAGRRNRWDETPTPGRVTDSDATPGGVTPGATPSG-VTWD------GLATPTP 281

Query: 921  KRQRSRWDETPATMGSATPMPGATPAGSYTPGVTPVGGVELATPTPGAINLRGAMTPEQY 1100
            KRQRSRWDETPATMGSATPM G TP  +YTPGVTP+GG+++ATPTPG +  RGAMTPEQ 
Sbjct: 282  KRQRSRWDETPATMGSATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRGAMTPEQL 341

Query: 1101 NLLRWEKDIEDRNRPLTDEELDVMFPQEGYKILDPPASYQPIRTPARKXXXXXXXXXXXX 1280
            N+ RWEKDIE+RNRPL+DEELD MFP++GYK+LDPPASY PIRTPARK            
Sbjct: 342  NMQRWEKDIEERNRPLSDEELDAMFPKDGYKVLDPPASYVPIRTPARKLQQTPTPMATPG 401

Query: 1281 YQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGSLLNXXXXXXXXXXXXXXRKIMKLLL 1460
            Y IPEENRGQQ+DVP E PGGLPFMKPEDYQYFG+LLN              RKIMKLLL
Sbjct: 402  YVIPEENRGQQYDVPPEVPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLL 461

Query: 1461 KVKNGTPPQRKTALRQLTDKAREFGAGPLFNCILPLLMQPTLEDQERHLLVKVIDRVLYK 1640
            KVKNGTP QRKTALRQLTDKARE GAGPLFN ILPLLMQPTLEDQERHLLVKVIDR+LYK
Sbjct: 462  KVKNGTPAQRKTALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYK 521

Query: 1641 LDELVRPFVHKILVVIEPL 1697
            LDELVRP+VHKILVVIEPL
Sbjct: 522  LDELVRPYVHKILVVIEPL 540