BLASTX nr result
ID: Coptis23_contig00010189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010189
(1714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera] 127 1e-26
ref|XP_002530585.1| nascent polypeptide associated complex alpha... 105 4e-20
ref|XP_002533865.1| conserved hypothetical protein [Ricinus comm... 96 2e-17
ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|2... 96 3e-17
ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243... 95 7e-17
>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
Length = 689
Score = 127 bits (318), Expect = 1e-26
Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 9/337 (2%)
Frame = +2
Query: 2 LVERWWDTTHSFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 181
L ERWWDTT + HFP EVG+TP DF ++TG+ +G G+ IP+ N + R
Sbjct: 105 LAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRIG-GKPIPY----------NAGVHRSE 153
Query: 182 PDCFETKG----IKLSAFSHHYISATQNNSLQPEANSEEETE-YVRAFLLYFLGQCLFNC 346
D + G + + S ++ +N + N++ + E + RAF+LY G +F
Sbjct: 154 DDLLKALGSRPPVIRGSVSCSWLFENFHNVV---CNTDRDRECHTRAFILYLFGCTMFGT 210
Query: 347 GHSGVRLGYLTGLLNLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWF 526
V L L L ++++I EYDWGGA L ++ +R A + + G+ + E+W
Sbjct: 211 LDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHMNSVSRGKAHR--LGGLWKVWEIWS 268
Query: 527 YEYLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHIS--RQQIEIRSIDSIR 700
YEY + + L V D ++PR W + E H + + R+ I +I+ +
Sbjct: 269 YEYFSLLAPSLK-VDDSMAFPRSLRW-WGGSEFEMCPKHRMVDLKNFREAINNLTIEMVN 326
Query: 701 WRPWERSRHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATG--EIAVPRDPPA 874
W PW ++ A LSR R++ + ++LG+R Q G + VP PP
Sbjct: 327 WNPWGEIEPTLPPEIRHAKELSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPM 386
Query: 875 NMLSSKDIPDETVDYHRANGWIDAIHFLDYDIDYSEY 985
+M + E ++ A F+D+ +Y ++
Sbjct: 387 SMRLTASFSAEELE--GCFKGFPAERFIDHSGNYDDF 421
>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
[Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
polypeptide associated complex alpha subunit, putative
[Ricinus communis]
Length = 687
Score = 105 bits (262), Expect = 4e-20
Identities = 78/291 (26%), Positives = 134/291 (46%)
Frame = +2
Query: 2 LVERWWDTTHSFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 181
LVER++ TH+ H E+G TPL + M+TG++ G P D E + + +
Sbjct: 269 LVERYFSETHTLHLGTFEIGPTPLAWTMITGITFGGDPLNPPDITPEECIKLLGLVGTES 328
Query: 182 PDCFETKGIKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHSGV 361
F +KL T + +P ANS+ E + R +LY +G C F+ +
Sbjct: 329 EGFFSQGKLKLDVLC----PLTLDFRKKP-ANSDLEWMF-RRLILYLVGSCFFSGPDMMI 382
Query: 362 RLGYLTGLLNLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYEYLA 541
+ ++ + N++KI +YDWG AT RG+ T S +G G +P L +W YE++
Sbjct: 383 PIRLVSAMSNIQKISQYDWGAATFSAFLRGMRHKT--SECRGTFSGFYPFLLLWAYEHIP 440
Query: 542 SMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPWERS 721
+ N D D +PR + W + K ++ R ++E D + + P+
Sbjct: 441 YQRPLTN--FDPDIFPRARQW---DLTKMDVPNSNDFTWYRLELEYLEEDEVNFDPY--G 493
Query: 722 RHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPA 874
+ + +++ LS+ R+ + Y+G+R RQ G + +P PPA
Sbjct: 494 KLWEEEGLEYERELSQKRIAFLGLESWELYMGERNLRQFGGGVRIPHSPPA 544
>ref|XP_002533865.1| conserved hypothetical protein [Ricinus communis]
gi|223526187|gb|EEF28515.1| conserved hypothetical
protein [Ricinus communis]
Length = 918
Score = 96.3 bits (238), Expect = 2e-17
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 18/351 (5%)
Frame = +2
Query: 2 LVERWWDTTHSFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 181
LVERW T++FHF E+ +T D +L G+++ I H SL + + L A
Sbjct: 79 LVERWRRETNTFHFGVGEMTVTLQDVALLLGLAIDGRPVIGITHTTCSL--VCERLLGKA 136
Query: 182 PDCFETKG--IKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHS 355
PD G +KLS ++ +N A EE RA+LLY +G +F+
Sbjct: 137 PDSSYASGGMVKLSWLKEYFSHCPEN------APIEEVERCTRAYLLYLVGSTIFSTTTG 190
Query: 356 G-VRLGYLTGLLNLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYE 532
V + YL N E+ + WG A L LYR L A S + + G +L+ W Y
Sbjct: 191 NKVPVMYLPLFENFEEAGNFAWGAAALAFLYRALGNACVKS--QSTICGCLTLLQCWSYF 248
Query: 533 YLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPW 712
+L LN HD +P + W + T+ ++ R+ ++ + W P+
Sbjct: 249 HLNIGRPKLNRDPIHDHFPFVLRW---KGKQSGPTTNRDVVFYRKALDSLKPSDVEWLPY 305
Query: 713 ERSRHMSDGI----VKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPANM 880
++M + +K L R + +L D +L DRC RQ +P D +
Sbjct: 306 ---KYMDSTVIPEDIKDTLILGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPEDVVRWI 362
Query: 881 LSSKDIPDETVDY-----HRANGWID-AIHFLDYD-----IDYSEYWHRVS 1000
S+ + D VD N W D ++ +D D I+Y +++ R++
Sbjct: 363 RKSRGV-DGGVDLSGKMESELNEWSDRRLYIVDGDDGVDEIEYMQWYSRIT 412
>ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|222844566|gb|EEE82113.1|
predicted protein [Populus trichocarpa]
Length = 416
Score = 95.9 bits (237), Expect = 3e-17
Identities = 91/340 (26%), Positives = 144/340 (42%), Gaps = 12/340 (3%)
Frame = +2
Query: 2 LVERWWDTTHSFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 181
LVERW T++FHF E+ +T D +L G+++ I H + + + L A
Sbjct: 68 LVERWRRETNTFHFTVGEMTVTLQDVALLLGLAIDGKPVIGITHT--TCASVCEGLLGKA 125
Query: 182 PDCFETKG--IKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHS 355
PD G +KLS + ++ +A EE RA+LLY +G +F+
Sbjct: 126 PDSSYASGGMVKLSWLKEFFSHCSE------DAPIEEVEHCTRAYLLYLVGSTIFSTTTG 179
Query: 356 G-VRLGYLTGLLNLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYE 532
V + YL E+ EY WG A L LYR L A S + + G +L+ W Y
Sbjct: 180 NKVPVMYLPLFAYFEEAGEYAWGAAALAFLYRALGNACVKS--QSTICGCLTLLQCWSYF 237
Query: 533 YLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPW 712
+L LN HD +P + W + T+ ++ R+ ++ + W P+
Sbjct: 238 HLNVGRPKLNRDPIHDHFPFVLRW---KGKQSGPTTNRDVVFYRKALDSLKTTDVEWLPY 294
Query: 713 E-RSRHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPANMLSS 889
+ + +K L R + +L D +L DRC RQ +P D + S
Sbjct: 295 KIMDSTVIPKDIKNTLILGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPEDVERWLRKS 354
Query: 890 KDIPDETVDY-----HRANGWID-AIHFLDYD--IDYSEY 985
+ + D VD N W+D +H +D D +D S+Y
Sbjct: 355 RGV-DGGVDLSGKMESELNEWMDRQLHIVDGDDGVDESDY 393
>ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243242 [Vitis vinifera]
Length = 532
Score = 94.7 bits (234), Expect = 7e-17
Identities = 88/366 (24%), Positives = 160/366 (43%), Gaps = 9/366 (2%)
Frame = +2
Query: 62 ITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLAPDCFETKGIK----LSAFSH 229
+TP DF ++TG+ +G G+ IP+ N + R D + G + + S
Sbjct: 1 MTPYDFSVITGLRIG-GKPIPY----------NAGVHRSEDDLLKALGSRPPVIRGSVSC 49
Query: 230 HYISATQNNSLQPEANSEEETE-YVRAFLLYFLGQCLFNCGHSGVRLGYLTGLLNLEKIW 406
++ +N + N++ + E + RAF+LY G +F V L L L ++++I
Sbjct: 50 SWLFENFHNVV---CNTDRDRECHTRAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIG 106
Query: 407 EYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYEYLASMNAILNDVHDHDSW 586
EYDWGGA L ++ +R A + + G+ + E+W YEY + + L V D ++
Sbjct: 107 EYDWGGAAYAALCTHMNSVSRGKAHR--LGGLWKVWEIWSYEYFSLLAPSLK-VDDSMAF 163
Query: 587 PRMKAWCYENRAKEFHETHHNIHIS--RQQIEIRSIDSIRWRPWERSRHMSDGIVKFAAT 760
PR W + E H + + R+ I +I+ + W PW ++ A
Sbjct: 164 PRSLRW-WGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEIRHAKE 222
Query: 761 LSRFRVILTSHDHKAYYLGDRCWRQATG--EIAVPRDPPANMLSSKDIPDETVDYHRANG 934
LSR R++ + ++LG+R Q G + VP PP +M + E ++
Sbjct: 223 LSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPMSMRLTASFSAEELE--GCFK 280
Query: 935 WIDAIHFLDYDIDYSEYWHRVSIGPLLPAVYRAGNIDMIGRDGIRPELRIPGPASPQSHP 1114
A F+D+ +Y ++ + P + + ++G++ +PG + P
Sbjct: 281 GFPAERFIDHSGNYDDFCASFLMPPFRNSDQDVRSQGETSKEGLQ---ILPGDIQIPNRP 337
Query: 1115 RSYNAY 1132
S+N Y
Sbjct: 338 -SWNVY 342