BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010180
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    73   1e-10
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    73   1e-10
gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]         72   2e-10
ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    72   3e-10
ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-...    69   2e-09

>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
 Frame = -3

Query: 829 RLKAFQL-ELRIEDRERRVKVRCHRLEHICLKISERTVLEGKTTIGKSIGNLQVLESMEV 653
           R++A  L E   ED    +  RC  L +  L  +  T  +      K+IG LQ L+ M V
Sbjct: 98  RIEAVLLPEFADEDHLLFLAERCPNLHYFSLPSTCMTYDQ----FCKAIGGLQSLKGMAV 153

Query: 652 DEVFISDDFTLKQVSECCPNFIKLK-DCNSVCKNMALLIATFLPKLKILDISSTNIHRKD 476
           DE  I+ D  L  V +CCP+F++LK     V + MA +I   LP+LK L+I S ++    
Sbjct: 154 DESLINYDVLL-HVHQCCPDFVELKVSALYVDEEMASVICNSLPRLKKLEIPSCDMSSAA 212

Query: 475 LLVILKGCVELESLDITNCGKIHSDDEILKIGCR*LEVFKWDNAYS----DYCSECEEEN 308
           ++  L    +LE LDI+          +L+   R L+VF W++ +       CS C E N
Sbjct: 213 IIRFLDCLEQLEHLDISGYETSAISSPVLEKASR-LKVFLWNSKFELGEFMDCSNCGEHN 271

Query: 307 EDMSYQWPCEHVMDEGFSTYIEG 239
             ++ Q PC+ +M+     ++ G
Sbjct: 272 --INPQEPCKCMMEHKVMDWLAG 292


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
 Frame = -3

Query: 829 RLKAFQL-ELRIEDRERRVKVRCHRLEHICLKISERTVLEGKTTIGKSIGNLQVLESMEV 653
           R++A  L E   ED    +  RC  L +  L  +  T  +      K+IG LQ L+ M V
Sbjct: 98  RIEAVLLPEFADEDHLLFLAERCPNLHYFSLPSTCMTYDQ----FCKAIGGLQSLKGMAV 153

Query: 652 DEVFISDDFTLKQVSECCPNFIKLK-DCNSVCKNMALLIATFLPKLKILDISSTNIHRKD 476
           DE  I+ D  L  V +CCP+F++LK     V + MA +I   LP+LK L+I S ++    
Sbjct: 154 DESLINYDVLL-HVHQCCPDFVELKVSALYVDEEMASVICNSLPRLKKLEIPSCDMSSAA 212

Query: 475 LLVILKGCVELESLDITNCGKIHSDDEILKIGCR*LEVFKWDNAYS----DYCSECEEEN 308
           ++  L    +LE LDI+          +L+   R L+VF W++ +       CS C E N
Sbjct: 213 IIRFLDCLEQLEHLDISGYETSAISSPVLEKASR-LKVFLWNSKFELGEFMDCSNCGEHN 271

Query: 307 EDMSYQWPCEHVMDEGFSTYIEG 239
             ++ Q PC+ +M+     ++ G
Sbjct: 272 --INPQEPCKCMMEHKVMDWLAG 292


>gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]
          Length = 236

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
 Frame = -3

Query: 706 TTIGKSIGNLQVLESMEVDEVFISDDFTLKQVSECCPNFIKLK-DCNSVCKNMALLIATF 530
           T   K+IG LQ L+ M VDE  I+ D  L  V +CCP+F+ LK     V + MA +I   
Sbjct: 78  TKFCKAIGGLQSLKGMAVDESLINYDVLL-HVHQCCPDFVGLKVSALYVDEEMASVICNS 136

Query: 529 LPKLKILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCR*LEVFKWD 350
           LP+LK L+I S ++    ++  L    +LE LDI+          +L+   R L+VF W+
Sbjct: 137 LPRLKKLEIPSCDMSSATIIRFLDCLEQLEHLDISGYETSAISSPVLEKASR-LKVFLWN 195

Query: 349 NAYS----DYCSECEEENEDMSYQWPCEHVMDEGFSTYIEG 239
           + +       CS C E N  ++ Q PC+ +M+     ++ G
Sbjct: 196 SKFELGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 234


>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
 Frame = -3

Query: 829 RLKAFQL-ELRIEDRERRVKVRCHRLEHICLKISERTVLEGKTTIGKSIGNLQVLESMEV 653
           R++A  L E   ED    +  RC  L++  L  +  T  +      K+IG L  L+ M V
Sbjct: 98  RIEAVLLPEFADEDHLLFLAERCPNLQYFSLPSTCMTYDQ----FCKAIGGLHSLKGMAV 153

Query: 652 DEVFISDDFTLKQVSECCPNFIKLK-DCNSVCKNMALLIATFLPKLKILDISSTNIHRKD 476
           DE  I+ D  L  V +CCP+F++LK     V + MA +I   LP+LK L+I S ++    
Sbjct: 154 DETLINYDVLL-HVHQCCPDFVELKVSALYVDEEMASVICNSLPRLKKLEIPSADMSSAA 212

Query: 475 LLVILKGCVELESLDITNCGKIHSDDEILKIGCR*LEVFKWDNAYS----DYCSECEEEN 308
           ++  L    ELE LDI+          +L+   R L+ F W++ +       CS C E N
Sbjct: 213 IIKFLDCLEELEHLDISGYETSAISSLVLEKASR-LKFFLWNSKFELGEFVDCSNCGEHN 271

Query: 307 EDMSYQWPCEHVMDEGFSTYIEG 239
             ++ Q PC+ +M+     ++ G
Sbjct: 272 --INPQEPCKCMMEHKVMDWLAG 292


>ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium
           distachyon]
          Length = 297

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
 Frame = -3

Query: 694 KSIGNLQVLESMEVDEVFISDDFTLKQVSECCPNFIKLKD-CNSVCKNMALLIATFLPKL 518
           K IG LQ L  M VDE  I+ D  L  V +CCPNF++LK     V ++MA +I   LP+L
Sbjct: 140 KVIGKLQYLRGMAVDESLINYDVLL-HVYQCCPNFLELKVFAVYVDEDMASIICDCLPRL 198

Query: 517 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCR*LEVFKWDNAYS 338
           K L+I ++++    ++  L    ELE +DI+          +L    R L+VF W++ + 
Sbjct: 199 KKLEIPNSDMSCAAIIKFLDCLEELEYMDISGYETSVISSSVLHKASR-LKVFVWNSKFE 257

Query: 337 ----DYCSECEEENEDMSYQWPCEHVMDEGFSTYIEG 239
                 CS C E +  ++ Q PC+  +D     ++ G
Sbjct: 258 LGEFKDCSNCGEHS--INPQEPCKCTIDHKVMDWLAG 292