BLASTX nr result

ID: Coptis23_contig00010179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010179
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    70   2e-10
ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...    68   9e-10
ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    66   3e-09
emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]    66   3e-09

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242  QAFAMPFASFSGGQAVSGLDFSSMAQSHVIFQNLPEAARNGYPFXXXXXXXXXXXXQKKT 63
            QAFAM F S +G  A  GLD SSMAQ+H I Q+LPEAAR+GY              QKK 
Sbjct: 1048 QAFAMSFTSINGAAAAPGLDISSMAQNHAILQSLPEAARHGY-----IIATAQAAQQKKN 1102

Query: 62   HQSSEEGKA-TSDSNNVDDER 3
            ++++EEGK+   DS++V++ER
Sbjct: 1103 YRATEEGKSGIGDSSSVEEER 1123


>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
            gi|223543857|gb|EEF45383.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1613

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242  QAFAMPFASFSGGQAVSGLDFSSMAQSHVIFQNLPEAARNGYPFXXXXXXXXXXXXQKKT 63
            QAFAM FA  +G  A  GLD SS+AQ+H I Q+LPEAAR GY F            QKK 
Sbjct: 1082 QAFAMSFAPINGATAAPGLDISSIAQNHAILQSLPEAARQGYHF--MAAAVAQAAQQKKN 1139

Query: 62   HQSSEEGK-ATSDSNNVDDER 3
            H+ SEEGK   +D  + +D+R
Sbjct: 1140 HRVSEEGKTGGNDGLHAEDDR 1160


>ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|222864822|gb|EEF01953.1|
            predicted protein [Populus trichocarpa]
          Length = 1202

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242  QAFAMPFASFSGGQAVSGLDFSSMAQSHVIFQNLPEAARNGYPFXXXXXXXXXXXXQKKT 63
            QAFAM F S +G  A  GLDFSS+A  H + Q+LPEAAR+GY              QKK 
Sbjct: 1091 QAFAMSFTSINGTTASPGLDFSSIAHDHALLQSLPEAARHGY----HLIAAAQAAQQKKN 1146

Query: 62   HQSSEEGK-ATSDSNNVDDER 3
            ++ SEEGK   +D++NV++ER
Sbjct: 1147 YRVSEEGKTGGNDTSNVEEER 1167


>ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1299

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/80 (48%), Positives = 51/80 (63%)
 Frame = -2

Query: 242  QAFAMPFASFSGGQAVSGLDFSSMAQSHVIFQNLPEAARNGYPFXXXXXXXXXXXXQKKT 63
            QAFAM FASF+G    SG++FSSMAQ+ VIFQ+LP+  R+GY              Q+K 
Sbjct: 972  QAFAMSFASFNGSNTASGINFSSMAQNPVIFQSLPDMVRHGY-----QVAPAAQMTQQKN 1026

Query: 62   HQSSEEGKATSDSNNVDDER 3
            +Q S EGK  +DS+N +D R
Sbjct: 1027 YQIS-EGKIGNDSSNAEDGR 1045


>emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]
          Length = 1631

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/80 (48%), Positives = 51/80 (63%)
 Frame = -2

Query: 242  QAFAMPFASFSGGQAVSGLDFSSMAQSHVIFQNLPEAARNGYPFXXXXXXXXXXXXQKKT 63
            QAFAM FASF+G    SG++FSSMAQ+ VIFQ+LP+  R+GY              Q+K 
Sbjct: 1183 QAFAMSFASFNGSNTASGINFSSMAQNPVIFQSLPDMVRHGY-----QVAPAAQMTQQKN 1237

Query: 62   HQSSEEGKATSDSNNVDDER 3
            +Q S EGK  +DS+N +D R
Sbjct: 1238 YQIS-EGKIGNDSSNAEDGR 1256


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