BLASTX nr result

ID: Coptis23_contig00010177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010177
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyl...   511   e-142
ref|XP_002300824.1| homocysteine s-methyltransferase [Populus tr...   501   e-139
ref|XP_002307602.1| homocysteine s-methyltransferase [Populus tr...   494   e-137
ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase ...   488   e-135
gb|ABF47292.1| selenocysteine methyltransferase [Camellia sinensis]   488   e-135

>ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223535926|gb|EEF37585.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 343

 Score =  511 bits (1317), Expect = e-142
 Identities = 254/333 (76%), Positives = 286/333 (85%)
 Frame = -3

Query: 1168 PASLALEEYLNNNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEA 989
            P+SL  +    + G AVIDGGLATELERHGA+LNDPLWSA CL+ SP LIR VHLDYLEA
Sbjct: 9    PSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRMVHLDYLEA 68

Query: 988  GADIIITASYQATIQGFEAKGLSTQESEALLNRSVEIALEARDIYYGSHVEFSCDSTGNG 809
            GADIIITASYQATIQGFEAKG S+ ESEALL +SVEIA EAR++Y+   +  +CD   +G
Sbjct: 69   GADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNNDG 128

Query: 808  RTHKQRPVLVAASVGSYGAYLADGSEYSGDYGKAVTLSTLKDFHRRRVHVLAESGADLIA 629
            R  K+RP+LVAASVGSYGAYLADGSEYSGDYG+AVTL TLKDFHRRRV VLAE+GADLIA
Sbjct: 129  RVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADLIA 188

Query: 628  FETIPNKLEAQAYSELLEEENINIPAWFSFNSKDGLNVVSGDSLLECTSIVEKSEKVLAV 449
            FET+PN++EAQAY+ELLEEE+I +PAWFSFNSKDG+NVVSGDSLLEC SI E   KV+AV
Sbjct: 189  FETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESCRKVIAV 248

Query: 448  GINCTPPRFIHGLIQTIKKVTAKPILVYPNSGETYDPDRKEWVQSTRSTGVPDEDFVSYV 269
            GINCTPP FIHGLI +IKKVT+KPIL+YPNSGE+YD DRKEWVQ   +TGV DEDFVSYV
Sbjct: 249  GINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWVQ---NTGVTDEDFVSYV 305

Query: 268  NRWREVGASLFGGCCRTTPNTIRAIKKMLSKGS 170
            N+W EVGASL GGCCRTTPNTIRAI + LS  S
Sbjct: 306  NKWCEVGASLVGGCCRTTPNTIRAIYRTLSNRS 338


>ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222842550|gb|EEE80097.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 332

 Score =  501 bits (1291), Expect = e-139
 Identities = 248/326 (76%), Positives = 280/326 (85%)
 Frame = -3

Query: 1135 NNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQ 956
            + G A+IDGGLATELERHGA+LNDPLWSA CL+ SP L+R VHLDYLEAGADIIITASYQ
Sbjct: 8    SGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVRAVHLDYLEAGADIIITASYQ 67

Query: 955  ATIQGFEAKGLSTQESEALLNRSVEIALEARDIYYGSHVEFSCDSTGNGRTHKQRPVLVA 776
            ATIQGFEAKG S ++SEALL +SVEIA EARDIYYG   E S D + +GR  K RP+LVA
Sbjct: 68   ATIQGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRVLKHRPILVA 127

Query: 775  ASVGSYGAYLADGSEYSGDYGKAVTLSTLKDFHRRRVHVLAESGADLIAFETIPNKLEAQ 596
            ASVGSYGAYLADGSEYSG+YG A+TL TLKDFHRRRV +LAESGADLIAFET+PNK+EAQ
Sbjct: 128  ASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQ 187

Query: 595  AYSELLEEENINIPAWFSFNSKDGLNVVSGDSLLECTSIVEKSEKVLAVGINCTPPRFIH 416
            AY+ELLEEE+I IPAWFSFNSKDG+NVVSGDSLLEC SI E  +  +AVGINCTPPRFIH
Sbjct: 188  AYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNAVAVGINCTPPRFIH 247

Query: 415  GLIQTIKKVTAKPILVYPNSGETYDPDRKEWVQSTRSTGVPDEDFVSYVNRWREVGASLF 236
             LI +IKKVT KPIL+YPNSGE+YD DRKEWVQ   +TG+ D+DFVSYVN+W E+GA+L 
Sbjct: 248  ELILSIKKVTTKPILIYPNSGESYDGDRKEWVQ---NTGISDQDFVSYVNKWCEIGAALV 304

Query: 235  GGCCRTTPNTIRAIKKMLSKGSVAIS 158
            GGCCRTTP+TIRAI K L   S A+S
Sbjct: 305  GGCCRTTPHTIRAIYKTLPNRSAALS 330


>ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222857051|gb|EEE94598.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 341

 Score =  494 bits (1273), Expect = e-137
 Identities = 247/326 (75%), Positives = 280/326 (85%)
 Frame = -3

Query: 1135 NNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQ 956
            + G A+IDGGLATELERHGA+LNDPLWSA CL+ SP L+R VHLDYLEAGADIIITASYQ
Sbjct: 19   SGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVREVHLDYLEAGADIIITASYQ 78

Query: 955  ATIQGFEAKGLSTQESEALLNRSVEIALEARDIYYGSHVEFSCDSTGNGRTHKQRPVLVA 776
            ATIQGFEAKG S +ESE+LL +SV+IA EARDIYY    + S DS  NGR  KQRP+LVA
Sbjct: 79   ATIQGFEAKGFSGEESESLLRKSVKIACEARDIYYDRCQKGSPDSN-NGRVLKQRPILVA 137

Query: 775  ASVGSYGAYLADGSEYSGDYGKAVTLSTLKDFHRRRVHVLAESGADLIAFETIPNKLEAQ 596
            AS+GSYGAYLADGSEYSG+YG A+TL TLKDFHRRRV +LAESGADLIAFET+PNK+EAQ
Sbjct: 138  ASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQ 197

Query: 595  AYSELLEEENINIPAWFSFNSKDGLNVVSGDSLLECTSIVEKSEKVLAVGINCTPPRFIH 416
            AY ELL+EE+I IPAWFSFNSKDG+NVVSGDSLL+C SI E  + V+AVGINCTPPRFIH
Sbjct: 198  AYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLDCASIAESCQNVVAVGINCTPPRFIH 257

Query: 415  GLIQTIKKVTAKPILVYPNSGETYDPDRKEWVQSTRSTGVPDEDFVSYVNRWREVGASLF 236
            GLI +IKKVT KPIL+YPNSGE+YD  RKEWVQ   +TG+ D+DFVSYVN+W E+GA+L 
Sbjct: 258  GLILSIKKVTTKPILIYPNSGESYDGKRKEWVQ---NTGISDQDFVSYVNKWCEIGAALV 314

Query: 235  GGCCRTTPNTIRAIKKMLSKGSVAIS 158
            GGCCRTTPNTIRAI + LS  S A S
Sbjct: 315  GGCCRTTPNTIRAIYRTLSSRSPAPS 340


>ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
          Length = 335

 Score =  488 bits (1255), Expect = e-135
 Identities = 248/339 (73%), Positives = 278/339 (82%)
 Frame = -3

Query: 1180 VVVKPASLALEEYLNNNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLD 1001
            V ++P+S   +  L   G AVIDGGLATELERHGA+LNDPLWSA CL+ SP LIR VHLD
Sbjct: 4    VDLQPSSFISDFLLQTGGVAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRTVHLD 63

Query: 1000 YLEAGADIIITASYQATIQGFEAKGLSTQESEALLNRSVEIALEARDIYYGSHVEFSCDS 821
            YLEAGADIIITASYQATIQGFEA+G S  ESEALL +SVEIA EAR +YY  +       
Sbjct: 64   YLEAGADIIITASYQATIQGFEARGFSRGESEALLRKSVEIACEARKMYYDRY------- 116

Query: 820  TGNGRTHKQRPVLVAASVGSYGAYLADGSEYSGDYGKAVTLSTLKDFHRRRVHVLAESGA 641
               GR  K RP+LVAASVGSYGAYLADGSEYSG YG  +T+ TLKDFHRRRV +LA++GA
Sbjct: 117  ---GRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGA 173

Query: 640  DLIAFETIPNKLEAQAYSELLEEENINIPAWFSFNSKDGLNVVSGDSLLECTSIVEKSEK 461
            DLIAFET+PNKLEAQAY+ELLEEENI IPAWFSFNSKDG++VVSGDSLLEC SI E  +K
Sbjct: 174  DLIAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVSIAESCKK 233

Query: 460  VLAVGINCTPPRFIHGLIQTIKKVTAKPILVYPNSGETYDPDRKEWVQSTRSTGVPDEDF 281
            V++VGINCTPPRFIHGLI +IKKVT KPIL+YPNSGE+YDP++KEWVQ    TGV  EDF
Sbjct: 234  VVSVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDPEQKEWVQ---KTGVSVEDF 290

Query: 280  VSYVNRWREVGASLFGGCCRTTPNTIRAIKKMLSKGSVA 164
            VSYVN+W EVGASL GGCCRTTPNTIRAI + LS    A
Sbjct: 291  VSYVNKWCEVGASLVGGCCRTTPNTIRAIYRTLSNNRSA 329


>gb|ABF47292.1| selenocysteine methyltransferase [Camellia sinensis]
          Length = 351

 Score =  488 bits (1255), Expect = e-135
 Identities = 248/335 (74%), Positives = 279/335 (83%), Gaps = 1/335 (0%)
 Frame = -3

Query: 1159 LALEEYLNNNG-YAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGA 983
            + + + L  +G  A+IDGGLATELERHGA+LNDPLWSA CL+ SP LIRRVHLDYLEAGA
Sbjct: 18   MMIPDLLRQSGSVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRRVHLDYLEAGA 77

Query: 982  DIIITASYQATIQGFEAKGLSTQESEALLNRSVEIALEARDIYYGSHVEFSCDSTGNGRT 803
            DIIITASYQATIQGFEAKG S +ESEA+L R VEIA EARDIYY +  E S DS  +GR 
Sbjct: 78   DIIITASYQATIQGFEAKGFSQEESEAMLKRCVEIAREARDIYYENCRELSNDSADDGRV 137

Query: 802  HKQRPVLVAASVGSYGAYLADGSEYSGDYGKAVTLSTLKDFHRRRVHVLAESGADLIAFE 623
             K R +LVAASVGSYGAYLADGSEYSGDYG A+ L  LKDFHRRRV +LA++GADLIAFE
Sbjct: 138  LKHRSILVAASVGSYGAYLADGSEYSGDYGNAMDLEFLKDFHRRRVQILADAGADLIAFE 197

Query: 622  TIPNKLEAQAYSELLEEENINIPAWFSFNSKDGLNVVSGDSLLECTSIVEKSEKVLAVGI 443
            T+PNKLEAQAY+ LLEEE+I IPAWFSFNSKDG++VVSGDSLLEC +I E  +KV+AVGI
Sbjct: 198  TVPNKLEAQAYARLLEEEDIKIPAWFSFNSKDGVHVVSGDSLLECAAIAEACKKVVAVGI 257

Query: 442  NCTPPRFIHGLIQTIKKVTAKPILVYPNSGETYDPDRKEWVQSTRSTGVPDEDFVSYVNR 263
            NCTPPRFIH LI T+KK T KPIL+YPNSGE+YD D+KEWVQ   +TGV D+DFVS VN 
Sbjct: 258  NCTPPRFIHDLILTVKKGTTKPILIYPNSGESYDADKKEWVQ---NTGVSDDDFVSCVNT 314

Query: 262  WREVGASLFGGCCRTTPNTIRAIKKMLSKGSVAIS 158
            W +VGASL GGCCRTTPNTIRAI K LS  S A S
Sbjct: 315  WCDVGASLVGGCCRTTPNTIRAIYKTLSNRSAAPS 349


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