BLASTX nr result

ID: Coptis23_contig00010166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010166
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98472.1| cytochrome P450 [Coptis japonica var. dissecta]       220   8e-56
ref|XP_002510313.1| cytochrome P450, putative [Ricinus communis]...   105   3e-21
gb|AFK38862.1| unknown [Lotus japonicus]                              103   2e-20
ref|XP_002510311.1| cytochrome P450, putative [Ricinus communis]...   102   4e-20
emb|CBI19611.3| unnamed protein product [Vitis vinifera]              100   9e-20

>dbj|BAF98472.1| cytochrome P450 [Coptis japonica var. dissecta]
          Length = 534

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/108 (99%), Positives = 108/108 (100%)
 Frame = +2

Query: 2   PTLKQWIRTSTLPAPIIVSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSV 181
           PTLKQWIRTSTLPAPIIVSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSV
Sbjct: 4   PTLKQWIRTSTLPAPIIVSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSV 63

Query: 182 PKPAYIVLGELADQYGPAFSIQFGMHPILVVSSWELVKACFTTNDKFF 325
           PKPAYIVLGELADQYGPAFSIQFG+HPILVVSSWELVKACFTTNDKFF
Sbjct: 64  PKPAYIVLGELADQYGPAFSIQFGVHPILVVSSWELVKACFTTNDKFF 111


>ref|XP_002510313.1| cytochrome P450, putative [Ricinus communis]
           gi|223551014|gb|EEF52500.1| cytochrome P450, putative
           [Ricinus communis]
          Length = 528

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/91 (53%), Positives = 66/91 (72%)
 Frame = +2

Query: 53  VSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSVPKPAYIVLGELADQYGP 232
           V+F++ +   F   RS  M + K APE  GAWP+IGHL+LL  P+P++IV G +AD+YGP
Sbjct: 16  VAFLIFVCSVFCITRS--MKKKKAAPEAGGAWPLIGHLHLLRGPQPSHIVFGNMADKYGP 73

Query: 233 AFSIQFGMHPILVVSSWELVKACFTTNDKFF 325
            F+I+ G+HP LV S+WE+ K CFTTNDK F
Sbjct: 74  IFTIKMGVHPTLVASNWEMAKECFTTNDKAF 104


>gb|AFK38862.1| unknown [Lotus japonicus]
          Length = 534

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/106 (47%), Positives = 63/106 (59%)
 Frame = +2

Query: 8   LKQWIRTSTLPAPIIVSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSVPK 187
           L  W  T     P  + F   LLF+  KKRS         PE  GAWP+IGHL LL   +
Sbjct: 6   LLSWSTTQPFTIPATLLFFFFLLFWSLKKRSHT---NTPPPEASGAWPLIGHLPLLGGSQ 62

Query: 188 PAYIVLGELADQYGPAFSIQFGMHPILVVSSWELVKACFTTNDKFF 325
           P +I LG +AD+YGP F+++ G+H  LVVS+WE+ K CFT NDK F
Sbjct: 63  PPHITLGNIADKYGPIFTLRLGVHRTLVVSNWEMAKECFTVNDKAF 108


>ref|XP_002510311.1| cytochrome P450, putative [Ricinus communis]
           gi|223551012|gb|EEF52498.1| cytochrome P450, putative
           [Ricinus communis]
          Length = 521

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/99 (49%), Positives = 66/99 (66%)
 Frame = +2

Query: 29  STLPAPIIVSFIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSVPKPAYIVLG 208
           S   A II+   V LL Y F ++S    + ++ P+  GAWPVIGHL+LLS  +P +I LG
Sbjct: 3   SLTSAIIIIIAFVTLLIYSFIRKSRKASKKREPPQAAGAWPVIGHLHLLSGSQPPHITLG 62

Query: 209 ELADQYGPAFSIQFGMHPILVVSSWELVKACFTTNDKFF 325
            LAD+YGP F+I+ G+H  L+VS+ E+ K C TTNDK F
Sbjct: 63  NLADKYGPIFTIKLGVHRTLIVSNGEIAKECLTTNDKAF 101


>emb|CBI19611.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 59  FIVILLFYFFKKRSSNMIRTKKAPEVVGAWPVIGHLNLLSVPKPAYIVLGELADQYGPAF 238
           FI +L FY+  K      R + APE  GAWPVIGHL+LL   +  +  LG +AD+YGP F
Sbjct: 15  FIFLLSFYYLLKMLRRSERKRTAPEAAGAWPVIGHLHLLGGSELPHKTLGAMADKYGPIF 74

Query: 239 SIQFGMHPILVVSSWELVKACFTTNDKFF 325
            I+ G  P+LVVS+WE+ K CFTTNDK F
Sbjct: 75  FIKLGARPVLVVSNWEIAKECFTTNDKAF 103


Top