BLASTX nr result

ID: Coptis23_contig00010165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010165
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282450.1| PREDICTED: transcription factor-like protein...   436   e-120
gb|AAQ13675.1|AF181998_1 transcription factor DP1 [Populus tremu...   434   e-119
ref|XP_002326197.1| transcription factor DP, E2 dimerization par...   432   e-119
ref|XP_002322893.1| transcription factor DP, E2 dimerization par...   429   e-118
ref|XP_004137174.1| PREDICTED: transcription factor-like protein...   429   e-118

>ref|XP_002282450.1| PREDICTED: transcription factor-like protein DPB [Vitis vinifera]
            gi|297741646|emb|CBI32778.3| unnamed protein product
            [Vitis vinifera]
          Length = 349

 Score =  436 bits (1122), Expect = e-120
 Identities = 236/339 (69%), Positives = 259/339 (76%), Gaps = 3/339 (0%)
 Frame = +1

Query: 46   TATKVG-TRSWGTTVXXXXXXXXXXXXXXXXXXXXEPGTATPARELAFTRLHHLNIQDDD 222
            T +K G TRSWGTTV                    E   ATPA E  F RL+HL+I  DD
Sbjct: 17   TVSKGGATRSWGTTVSGQSVSTSGSVGSPSSRS--EAALATPASENTFLRLNHLDIHGDD 74

Query: 223  VGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKVCEKVESKGRTTYNEVADELVAEFAD 402
             GS      +KKKRGQRAVGGDKSG GLRQFSMKVCEKVESKGRTTYNEVADELVAEFAD
Sbjct: 75   AGSQGAA-NRKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFAD 133

Query: 403  PNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPHTSESDIEDLKA 582
            P++  +SPD+QQY EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP TS +DIE+LK 
Sbjct: 134  PSNSLTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKT 193

Query: 583  ERHGLQSRIEKKAAYLQELEEQSVGLQNLIQRNEELYGSGHMPTGGVSLPFILIQTRPHA 762
            +R GL+ RIEKKAAYLQELEEQ VGLQNLIQRNE+LY SG+ P+GGV+LPFIL+QTRPHA
Sbjct: 194  DRIGLRGRIEKKAAYLQELEEQFVGLQNLIQRNEQLYSSGNAPSGGVALPFILVQTRPHA 253

Query: 763  TVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRLGKTPEADGDAHAPNSTANGGESSS 942
            TVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+  + P+ D   H        GE SS
Sbjct: 254  TVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQGDDVTH---DFPADGEGSS 310

Query: 943  IQSMSQAHTP--LRSNASGRHPTSPPLPGILKARTKHEH 1053
            +  M Q+  P   RS+  GR PTSPPLPGILKAR KHEH
Sbjct: 311  MPGMYQSLIPHSSRSSTLGRPPTSPPLPGILKARVKHEH 349


>gb|AAQ13675.1|AF181998_1 transcription factor DP1 [Populus tremula x Populus tremuloides]
            gi|32187097|gb|AAP73785.1| DP1 [Populus tremula x Populus
            tremuloides]
          Length = 353

 Score =  434 bits (1116), Expect = e-119
 Identities = 223/304 (73%), Positives = 250/304 (82%), Gaps = 2/304 (0%)
 Frame = +1

Query: 148  EPGTATPARELAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKV 327
            E   ATPA +  F RL+HL+I  DD  + +    KKKKRGQRAVG DKSG GLRQFS+KV
Sbjct: 52   EHAMATPASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKV 111

Query: 328  CEKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDII 507
            CEKVESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DII
Sbjct: 112  CEKVESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDII 171

Query: 508  SKDKKEIQWKGLPHTSESDIEDLKAERHGLQSRIEKKAAYLQELEEQSVGLQNLIQRNEE 687
            SKDKKEIQWKGLP TS SDIE+LK ER GL++R EKKAAYLQELEEQ VGLQNLIQRNE+
Sbjct: 172  SKDKKEIQWKGLPRTSLSDIEELKVERLGLRNRFEKKAAYLQELEEQFVGLQNLIQRNEQ 231

Query: 688  LYGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMR 867
            LY SG+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+
Sbjct: 232  LYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMK 291

Query: 868  LGKTPEADGDAHAPNSTANGGESSSIQSMSQAH--TPLRSNASGRHPTSPPLPGILKART 1041
              + P++DG   APN  A+GGE SS+ SM Q        +N   RHPTSPPLPGI+KAR 
Sbjct: 292  FCERPQSDG--MAPNPPADGGEGSSMSSMYQPQILASPSTNTPVRHPTSPPLPGIIKARV 349

Query: 1042 KHEH 1053
            K+EH
Sbjct: 350  KNEH 353


>ref|XP_002326197.1| transcription factor DP, E2 dimerization partner protein [Populus
            trichocarpa] gi|222833390|gb|EEE71867.1| transcription
            factor DP, E2 dimerization partner protein [Populus
            trichocarpa]
          Length = 299

 Score =  432 bits (1111), Expect = e-119
 Identities = 222/300 (74%), Positives = 249/300 (83%), Gaps = 2/300 (0%)
 Frame = +1

Query: 160  ATPARELAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKVCEKV 339
            ATPA +  F RL+HL+I  DD  + +    KKKKRGQRAVG DKSG GLRQFS+KVCEKV
Sbjct: 2    ATPASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKVCEKV 61

Query: 340  ESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIISKDK 519
            ESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DIISKDK
Sbjct: 62   ESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIISKDK 121

Query: 520  KEIQWKGLPHTSESDIEDLKAERHGLQSRIEKKAAYLQELEEQSVGLQNLIQRNEELYGS 699
            KEIQWKGLP TS SDIE+LK ER GL++RIEKKAAYLQELEEQ VGLQNLIQRNE+LY S
Sbjct: 122  KEIQWKGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFVGLQNLIQRNEQLYSS 181

Query: 700  GHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRLGKT 879
            G+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+  + 
Sbjct: 182  GNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCER 241

Query: 880  PEADGDAHAPNSTANGGESSSIQSMSQAH--TPLRSNASGRHPTSPPLPGILKARTKHEH 1053
            P++D    APN  A+GGE SS+ SM Q        +N   RHPTSPPLPGI+KAR K+EH
Sbjct: 242  PQSDD--MAPNPPADGGEGSSMSSMYQPQILASPSTNTPVRHPTSPPLPGIIKARVKNEH 299


>ref|XP_002322893.1| transcription factor DP, E2 dimerization partner protein [Populus
            trichocarpa] gi|222867523|gb|EEF04654.1| transcription
            factor DP, E2 dimerization partner protein [Populus
            trichocarpa]
          Length = 355

 Score =  429 bits (1104), Expect = e-118
 Identities = 225/305 (73%), Positives = 251/305 (82%), Gaps = 3/305 (0%)
 Frame = +1

Query: 148  EPGTATPARELAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGG-DKSGNGLRQFSMK 324
            E   ATPA +  F RL+HL+I  DD  + +    KKKKRGQRA GG DKSG GLRQFSMK
Sbjct: 52   EHAMATPASDNTFLRLNHLDIHADDAATQDAAANKKKKRGQRAAGGADKSGRGLRQFSMK 111

Query: 325  VCEKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDI 504
            VCEKVESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DI
Sbjct: 112  VCEKVESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDI 171

Query: 505  ISKDKKEIQWKGLPHTSESDIEDLKAERHGLQSRIEKKAAYLQELEEQSVGLQNLIQRNE 684
            ISKDKKEIQWKGLP TS SDIE+LKAER GL++RIEKKAAYLQELEEQ +GLQNLIQRNE
Sbjct: 172  ISKDKKEIQWKGLPRTSLSDIEELKAERLGLRNRIEKKAAYLQELEEQFMGLQNLIQRNE 231

Query: 685  ELYGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAM 864
            +LY SG+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM
Sbjct: 232  QLYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAM 291

Query: 865  RLGKTPEADGDAHAPNSTANGGESSSIQSM--SQAHTPLRSNASGRHPTSPPLPGILKAR 1038
            +  +  ++D  A APN  A+GGE SS+  M   Q  T  R+N   R PTSPPLPGI+KAR
Sbjct: 292  KFCERHQSDNMA-APNPAADGGEGSSMSIMYQPQIRTSPRTNNPVRLPTSPPLPGIIKAR 350

Query: 1039 TKHEH 1053
             KHEH
Sbjct: 351  VKHEH 355


>ref|XP_004137174.1| PREDICTED: transcription factor-like protein DPB-like [Cucumis
            sativus]
          Length = 347

 Score =  429 bits (1103), Expect = e-118
 Identities = 224/305 (73%), Positives = 248/305 (81%), Gaps = 3/305 (0%)
 Frame = +1

Query: 148  EPGTATPARELAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKV 327
            E   ATPA +  F RL++L+I  D+ GS       KKKRGQRAVGGDKSG GLRQFSMKV
Sbjct: 45   EQTMATPASDNTFLRLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKV 104

Query: 328  CEKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDII 507
            CEKVESKGRTTYNEVADELVAEFADP +  +SPD+QQY EKNIRRRVYDALNVLMAMDII
Sbjct: 105  CEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDII 164

Query: 508  SKDKKEIQWKGLPHTSESDIEDLKAERHGLQSRIEKKAAYLQELEEQSVGLQNLIQRNEE 687
            SKDKKEIQWKGLP TS +DIE+LKAER GL++RIEKKAAYLQELEEQ VGLQNLIQRNE+
Sbjct: 165  SKDKKEIQWKGLPRTSVNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQ 224

Query: 688  LYGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMR 867
            L+ S + P+GGVSLPFIL+QTRPHATVE+EISEDMQLVHFDFNSTPFELHDDNYVL AM+
Sbjct: 225  LFNSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMK 284

Query: 868  LGKTPEADGDAHAPNSTANGGESSSIQSMSQ-AHTPL--RSNASGRHPTSPPLPGILKAR 1038
                P+ D  A   N T +GGE SS+  M Q  H P+   SN   R PTSPPLPGI+KAR
Sbjct: 285  FCNRPQCDNTAQ--NFTPDGGEGSSMSGMYQPPHIPIPSLSNTPVRTPTSPPLPGIIKAR 342

Query: 1039 TKHEH 1053
             KHEH
Sbjct: 343  VKHEH 347


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