BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010163
         (1720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]...   598   e-168
ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast pr...   587   e-165
ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chl...   583   e-164
ref|XP_002313443.1| inner membrane protein [Populus trichocarpa]...   575   e-161
ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chl...   572   e-161

>ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]
            gi|222845623|gb|EEE83170.1| inner membrane protein
            [Populus trichocarpa]
          Length = 451

 Score =  598 bits (1541), Expect = e-168
 Identities = 322/460 (70%), Positives = 358/460 (77%), Gaps = 7/460 (1%)
 Frame = -3

Query: 1586 MAKTILSSSPFLNSPQLPLLPRHGQSKYSILTTPKRLSHNGTRVRMSFNGLPTPPIQSF- 1410
            MA+T+LSS PF+ +P LP L RH       LTT +R     TR+++S +    PPI    
Sbjct: 1    MARTLLSSPPFIGTP-LPSLSRHA------LTTNRRFI--STRIKLSLHD-NIPPIHHHL 50

Query: 1409 -ESIDFEGMVRRAEGLLYTLADAAVV--TADSTGSGSDGVAAQKGGGWFGFISDAMEVVL 1239
              S+DF  ++ RAEG LYTLADAAV   +A ST S     AAQK GGWFGFISD ME VL
Sbjct: 51   HSSVDFNTIISRAEGFLYTLADAAVAVDSAASTTSSDTADAAQKNGGWFGFISDGMEFVL 110

Query: 1238 KVLKDGLSTVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTMAMQNLQPKIKAIQERYA 1059
            KVLKDGLS+VHVPYAYGFAIILLT+ VKVATLPLTK+QVEST+AMQNLQPKIKAIQ+RYA
Sbjct: 111  KVLKDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYA 170

Query: 1058 GNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPS 879
            GNQERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEG+LTEGFFWIPS
Sbjct: 171  GNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPS 230

Query: 878  LGGPTTIAARQSGAGVSWLFPFVDGHPPLGWHDTXXXXXXXXXXXASQYVSMEIMKPPQT 699
            LGGPTTIAARQSG+G+SWLFPFVDGHPPLGWHDT           ASQYVSMEIMKPPQT
Sbjct: 231  LGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLIASQYVSMEIMKPPQT 290

Query: 698  NDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPTVSE 519
            +DP QKNTLL+FKFLP+MIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V+E
Sbjct: 291  DDPTQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNE 350

Query: 518  NASGIISAGRAKRSTSQPVLPQSTSQPGQPGERFKQLXXXXXXXXXKYNKALPENDI--I 345
            NASGII+AGRAKR         S SQPGQPG+RFKQL            KALP   +  +
Sbjct: 351  NASGIITAGRAKR---------SASQPGQPGDRFKQL--KEQDKSKTLRKALPTEGVQAL 399

Query: 344  TSLSDTDEDSDGEINAK-DDTREEAYASGVNKQIPDYSEP 228
             S S +DEDSD E N K ++  EE YAS  +K++PD S P
Sbjct: 400  DSASGSDEDSDEETNDKGEEVLEETYASSASKRVPDISRP 439


>ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
            [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner
            membrane protein PPF-1, chloroplast precursor, putative
            [Ricinus communis]
          Length = 449

 Score =  587 bits (1514), Expect = e-165
 Identities = 315/456 (69%), Positives = 358/456 (78%), Gaps = 3/456 (0%)
 Frame = -3

Query: 1586 MAKTILSSSPFLNSPQLPLLPRHGQSKYSILTTPKRLSHNGTRVRMSFNGLPTPPIQSFE 1407
            MAKT++SS  F+ +P      RHG  ++S+L  P R   + T+V+ S + +P  PI   +
Sbjct: 1    MAKTLISSPSFIGAPLPSSSSRHGL-QHSLL--PSRRFISTTKVKFSLHEIP--PITHLD 55

Query: 1406 SIDFEGMVRRAEGLLYTLADAAVVTADSTGSGSDGVAAQKGGGWFGFISDAMEVVLKVLK 1227
            S+DF  +V RAE LLYTLADAAV    S  + +   A QK  GWFGFIS+ ME VLKVLK
Sbjct: 56   SVDFNSIVSRAESLLYTLADAAVAVDSSAATDT---AVQKNNGWFGFISEGMEFVLKVLK 112

Query: 1226 DGLSTVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTMAMQNLQPKIKAIQERYAGNQE 1047
            DGLS+VHVPY+YGFAIILLTVIVK+ATLPLTKQQVEST+AMQNLQPKIKAIQ+RYAGNQE
Sbjct: 113  DGLSSVHVPYSYGFAIILLTVIVKIATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQE 172

Query: 1046 RIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGP 867
            RIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGP
Sbjct: 173  RIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGP 232

Query: 866  TTIAARQSGAGVSWLFPFVDGHPPLGWHDTXXXXXXXXXXXASQYVSMEIMKPPQTNDPA 687
            TTIAARQSG+G+SWLFPFVDGHPPLGW+DT            SQYVSMEIMKPPQT+DPA
Sbjct: 233  TTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPA 292

Query: 686  QKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPTVSENASG 507
            QKNTLL+FKFLPLMIGYFSLSVPSGLSIYWF NNVLSTAQQVWLRKLGGAKP V +NASG
Sbjct: 293  QKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFVNNVLSTAQQVWLRKLGGAKPVVDQNASG 352

Query: 506  IISAGRAKRSTSQPVLPQSTSQPGQPGERFKQLXXXXXXXXXKYNKALPEND--IITSLS 333
            II+AGRAKRS SQP       Q G  G+RF+QL         K  KALP+++   + S S
Sbjct: 353  IITAGRAKRSASQP-------QRG--GDRFRQL--KEEEKRKKLGKALPDDEAQALDSAS 401

Query: 332  DTDEDSDGEINAK-DDTREEAYASGVNKQIPDYSEP 228
            D+DE+SD E  AK ++  EEAYAS  +KQ+PD S P
Sbjct: 402  DSDEESDEETKAKGEEVLEEAYASSSSKQVPDISRP 437


>ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 1
            [Vitis vinifera]
          Length = 455

 Score =  583 bits (1502), Expect = e-164
 Identities = 316/461 (68%), Positives = 352/461 (76%), Gaps = 8/461 (1%)
 Frame = -3

Query: 1586 MAKTILSSSPFLNSPQLPLLPRHGQSKYSILTTPKRLSHNGTRVRMSFNGLPTPPIQSFE 1407
            MA+T++SS PF+  P   L  RHG     +L +        TRV+ S + LP  PI S +
Sbjct: 1    MARTLISSPPFIGKPLPSLSSRHG-----LLHSLPHRRLISTRVKFSLHDLP--PIHSLD 53

Query: 1406 S--IDFEGMVRRAEGLLYTLADAAVVT---ADSTGSGSDGVAAQKGGGWFGFISDAMEVV 1242
            S  IDF G+V RAE LLYTLADAAV     A    SG+   A QK GGWFGFIS+ MEVV
Sbjct: 54   SSSIDFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVV 113

Query: 1241 LKVLKDGLSTVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTMAMQNLQPKIKAIQERY 1062
            LKVL+DGL+ VHVPYAYGFAIILLTVIVK+AT PLTK+QVEST+AMQNLQPKIKAIQERY
Sbjct: 114  LKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERY 173

Query: 1061 AGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 882
             GNQERIQLETSRLYKQAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIP
Sbjct: 174  KGNQERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 233

Query: 881  SLGGPTTIAARQSGAGVSWLFPFVDGHPPLGWHDTXXXXXXXXXXXASQYVSMEIMKPPQ 702
            SLGGPTTIAARQSG+G+SWL PFVDGHPPLGW DT            SQYVSME+MKPPQ
Sbjct: 234  SLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQ 293

Query: 701  TNDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPTVS 522
            T+DP+QKNTLL+FKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V+
Sbjct: 294  TDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVN 353

Query: 521  ENASGIISAGRAKRSTSQPVLPQSTSQPGQPGERFKQLXXXXXXXXXKYNKALPENDI-- 348
            E+ASGII+AGRAKR         S SQP + G+RF+QL         K +KALP  +I  
Sbjct: 354  EDASGIITAGRAKR---------SASQPARAGDRFRQL--KEEEKKKKISKALPAEEIQA 402

Query: 347  ITSLSDTDEDSDGEINAK-DDTREEAYASGVNKQIPDYSEP 228
            + S SD+DE SD E   K DD  EEAY S  +KQ+P Y+ P
Sbjct: 403  LASESDSDEGSDEETKDKGDDVLEEAYVSSGSKQVPQYAGP 443


>ref|XP_002313443.1| inner membrane protein [Populus trichocarpa]
            gi|222849851|gb|EEE87398.1| inner membrane protein
            [Populus trichocarpa]
          Length = 446

 Score =  575 bits (1483), Expect = e-161
 Identities = 314/457 (68%), Positives = 350/457 (76%), Gaps = 4/457 (0%)
 Frame = -3

Query: 1586 MAKTILSSSPFLNSPQLPLLPRHGQSKYSILTTPKRLSHNGTRVRMSFNGLPTPPIQSF- 1410
            MA+T+LSS PF+ +  LP L RH       LTT +R     TR+++S +    PPI    
Sbjct: 1    MARTLLSSPPFI-ATSLPSLSRH------TLTTNRRFI--STRIKLSLHD-NIPPIHHHL 50

Query: 1409 -ESIDFEGMVRRAEGLLYTLADAAVVTADSTGSGSDGVAAQKGGGWFGFISDAMEVVLKV 1233
              SIDF  ++ RAEG LYTLADAAV   DS  S +    AQK GGWFGFISD ME VLKV
Sbjct: 51   DSSIDFNSIISRAEGFLYTLADAAVAV-DSAASTTSTDTAQKSGGWFGFISDGMEFVLKV 109

Query: 1232 LKDGLSTVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTMAMQNLQPKIKAIQERYAGN 1053
            LKDGLS VHVPYAYGFAIILLTV VKVATLPLTK+QVEST+AMQNLQPKIKAIQ+RYAGN
Sbjct: 110  LKDGLSAVHVPYAYGFAIILLTVFVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGN 169

Query: 1052 QERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLG 873
            QERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEG+LTEGFFWIPSLG
Sbjct: 170  QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLG 229

Query: 872  GPTTIAARQSGAGVSWLFPFVDGHPPLGWHDTXXXXXXXXXXXASQYVSMEIMKPPQTND 693
            GPTTIAARQSG+G+SWLFPFVDGHPPLGW+DT            SQYVSMEIMKPPQT+D
Sbjct: 230  GPTTIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPVLLVVSQYVSMEIMKPPQTDD 289

Query: 692  PAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPTVSENA 513
            P QKNTLL+FKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLR+LGGAKP V+ENA
Sbjct: 290  PTQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRQLGGAKPVVNENA 349

Query: 512  SGIISAGRAKRSTSQPVLPQSTSQPGQPGERFKQLXXXXXXXXXKYNKALPENDIITSLS 333
            SGII+AGRAKR         S +QPGQPG+RF+           K +KAL   D+    S
Sbjct: 350  SGIITAGRAKR---------SAAQPGQPGDRFR---LKEEEKGKKLSKALQSEDVQALDS 397

Query: 332  DTDEDSDGEINAK-DDTREEAYA-SGVNKQIPDYSEP 228
             +DEDSD E   K ++  EEAYA S  +K++ D S P
Sbjct: 398  ASDEDSDEETKDKGEEVLEEAYASSSASKKVSDISRP 434


>ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like [Cucumis
            sativus] gi|449524424|ref|XP_004169223.1| PREDICTED:
            inner membrane protein PPF-1, chloroplastic-like [Cucumis
            sativus]
          Length = 453

 Score =  572 bits (1475), Expect = e-161
 Identities = 316/460 (68%), Positives = 349/460 (75%), Gaps = 9/460 (1%)
 Frame = -3

Query: 1586 MAKTILSSSPFLNSPQLPLLPRHGQSKYSILTTPKRLSHNGTRVRMSFNGLPTPPIQSFE 1407
            MAKT++SSSPF+ S  LP L RH      + T P R  H  TRV  SF+ LP  P+ +F 
Sbjct: 1    MAKTLISSSPFVGS-SLPSLSRH----LPLHTLPHR-RHLTTRVNFSFHQLP--PVHTFH 52

Query: 1406 S-IDFEGMVRRAEGLLYTLADAAVVTADSTGSG-----SDGVAAQKGGGWFGFISDAMEV 1245
            S +DF+ +V R EGLLYTLADAAV   DST S      S   A QK GGWFGFISDAMEV
Sbjct: 53   SSLDFQAIVSRTEGLLYTLADAAVAV-DSTLSAAATSTSPDTAVQKNGGWFGFISDAMEV 111

Query: 1244 VLKVLKDGLSTVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTMAMQNLQPKIKAIQER 1065
            VLKVLK  L  VH+PY+YGFAIILLT+IVKVAT PLTKQQVEST+AMQNLQPKIKAIQ+R
Sbjct: 112  VLKVLKGSLEAVHIPYSYGFAIILLTIIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQR 171

Query: 1064 YAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 885
            YAGNQERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWI
Sbjct: 172  YAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 231

Query: 884  PSLGGPTTIAARQSGAGVSWLFPFVDGHPPLGWHDTXXXXXXXXXXXASQYVSMEIMKPP 705
            PSLGGPTTIAARQSGAG+SWL PFVDGHPPLGW DT            SQYVSME+MKPP
Sbjct: 232  PSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPP 291

Query: 704  QTNDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPTV 525
            QT+DPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V
Sbjct: 292  QTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVV 351

Query: 524  SENASGIISAGRAKRSTSQPVLPQSTSQPGQPGERFKQLXXXXXXXXXKYNKALPENDI- 348
            +ENA GII+AGRAKR          T +  + G+RF+Q+         K  KA    DI 
Sbjct: 352  NENAPGIITAGRAKR----------TPESERTGDRFRQV--REDEKKNKLTKAARSEDIQ 399

Query: 347  -ITSLSDTDEDSDGEINAK-DDTREEAYASGVNKQIPDYS 234
             + S SDT++  DGE   K +D  EEAYAS  +K +P Y+
Sbjct: 400  TLASESDTEDGYDGETTEKGEDGLEEAYASSADKDVPAYN 439