BLASTX nr result

ID: Coptis23_contig00010152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010152
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
gb|ABK95002.1| unknown [Populus trichocarpa]                          157   1e-36
ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, p...   152   2e-35
ref|NP_001077888.1| Methylmalonate-semialdehyde dehydrogenase [a...   152   2e-35

>ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/87 (88%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   MILAELAMEAGLPNGVLNIVHGTNEIVNNICDDKDIRAISFVGSKTAGMHIYSRAAAKGK 181
           +ILAELAMEAGLPNGVLNIVHGTN+IVN ICDD DIRAISFVGS TAGMHIYSRA+AKGK
Sbjct: 181 IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240

Query: 182 RVQANMGAKNHAIIVPDANIDATLNAL 262
           RVQ+NMGAKNHAI++PDAN DATLNAL
Sbjct: 241 RVQSNMGAKNHAIVLPDANTDATLNAL 267


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/87 (88%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   MILAELAMEAGLPNGVLNIVHGTNEIVNNICDDKDIRAISFVGSKTAGMHIYSRAAAKGK 181
           +ILAELAMEAGLPNGVLNIVHGTN+IVN ICDD DIRAISFVGS TAGMHIYSRA+AKGK
Sbjct: 226 IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 285

Query: 182 RVQANMGAKNHAIIVPDANIDATLNAL 262
           RVQ+NMGAKNHAI++PDAN DATLNAL
Sbjct: 286 RVQSNMGAKNHAIVLPDANTDATLNAL 312


>ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|222847266|gb|EEE84813.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/87 (86%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   MILAELAMEAGLPNGVLNIVHGTNEIVNNICDDKDIRAISFVGSKTAGMHIYSRAAAKGK 181
           +ILAELAMEAGLP+GVLNIVHGTN++VN ICDD DIRAISFVGS TAGMHIYSRA+AKGK
Sbjct: 181 IILAELAMEAGLPDGVLNIVHGTNDVVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240

Query: 182 RVQANMGAKNHAIIVPDANIDATLNAL 262
           RVQ+NMGAKNHAI++PDAN+DATLNAL
Sbjct: 241 RVQSNMGAKNHAIVLPDANVDATLNAL 267


>ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
           communis] gi|223542563|gb|EEF44103.1|
           methylmalonate-semialdehyde dehydrogenase, putative
           [Ricinus communis]
          Length = 541

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/87 (85%), Positives = 82/87 (94%)
 Frame = +2

Query: 2   MILAELAMEAGLPNGVLNIVHGTNEIVNNICDDKDIRAISFVGSKTAGMHIYSRAAAKGK 181
           +ILAELAMEAGLP+GVLNIVHGTN+IVN ICDD DIRAISFVGS TAGMHIY RA+AKGK
Sbjct: 225 IILAELAMEAGLPDGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYGRASAKGK 284

Query: 182 RVQANMGAKNHAIIVPDANIDATLNAL 262
           RVQ+NMGAKNH I++PDAN+DATLNAL
Sbjct: 285 RVQSNMGAKNHGIVLPDANMDATLNAL 311


>ref|NP_001077888.1| Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis
           thaliana] gi|330251194|gb|AEC06288.1|
           Methylmalonate-semialdehyde dehydrogenase [acylating]
           [Arabidopsis thaliana]
          Length = 595

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/87 (82%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   MILAELAMEAGLPNGVLNIVHGTNEIVNNICDDKDIRAISFVGSKTAGMHIYSRAAAKGK 181
           +ILAELAMEAGLP+GVLNIVHGTN+ VN ICDD+DIRA+SFVGS TAGMHIY+RAAAKGK
Sbjct: 293 VILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGK 352

Query: 182 RVQANMGAKNHAIIVPDANIDATLNAL 262
           R+Q+NMGAKNH +++PDANIDATLNAL
Sbjct: 353 RIQSNMGAKNHGLVLPDANIDATLNAL 379


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