BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010134
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...   345   1e-92
ref|XP_002319934.1| predicted protein [Populus trichocarpa] gi|2...   343   3e-92
gb|AFK33315.1| unknown [Lotus japonicus]                              342   8e-92
gb|ACU14088.1| unknown [Glycine max]                                  342   8e-92
ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|1...   342   1e-91

>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  345 bits (884), Expect = 1e-92
 Identities = 168/228 (73%), Positives = 185/228 (81%), Gaps = 1/228 (0%)
 Frame = -1

Query: 888 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTN-LIGKEKGMNITCMATSIPADRVP 712
           MA +TLSP T S+LCS +NG+ SP  A++ K T+T+  +GK KG+ I C ATSIPADRVP
Sbjct: 1   MAASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGKGKGLKIKCQATSIPADRVP 60

Query: 711 DMSKRETXXXXXXXXXXLPTAGMLVPYAVFFXXXXXXXXXXGTVAKDALGNDVLAAEWLK 532
           DM KR+           LP+AGML+PYA FF          G VAKDALGNDV+A EWLK
Sbjct: 61  DMGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWLK 120

Query: 531 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 352
            HGPGDRTLTQGLKGDPTYLVVE+DKTLATYGINAVCTHLGCVVP+N AENKFICPCHGS
Sbjct: 121 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGS 180

Query: 351 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 208
           QYNNQG VVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTG+DPWWA
Sbjct: 181 QYNNQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>ref|XP_002319934.1| predicted protein [Populus trichocarpa] gi|222858310|gb|EEE95857.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  343 bits (881), Expect = 3e-92
 Identities = 164/227 (72%), Positives = 182/227 (80%), Gaps = 1/227 (0%)
 Frame = -1

Query: 888 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADR-VP 712
           MA+TTLSP TPS+LCSSK+GMFSP  A  +K  +TN++ KEKGM I C ATSIPAD  VP
Sbjct: 1   MASTTLSPATPSQLCSSKSGMFSPTHAAFVKPARTNMVTKEKGMRIACQATSIPADDGVP 60

Query: 711 DMSKRETXXXXXXXXXXLPTAGMLVPYAVFFXXXXXXXXXXGTVAKDALGNDVLAAEWLK 532
           DM KRE           LPTAGML+PY  FF          GTVAKDALGND++  +WLK
Sbjct: 61  DMGKRELMNLLLLGALSLPTAGMLIPYTYFFVPSGLGGGGGGTVAKDALGNDIVVEQWLK 120

Query: 531 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 352
            HGPGDRTL+QGLKGDPTYLVVE D+TLATYGINAVCTHLGCVVP+N+AE KFICPCHGS
Sbjct: 121 THGPGDRTLSQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNQAEKKFICPCHGS 180

Query: 351 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWW 211
           QYN+QG VVRGPAPLSLALAH D+DDGKV+FVPWVETDFRTG DPWW
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDDPWW 227


>gb|AFK33315.1| unknown [Lotus japonicus]
          Length = 227

 Score =  342 bits (877), Expect = 8e-92
 Identities = 161/227 (70%), Positives = 183/227 (80%)
 Frame = -1

Query: 888 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADRVPD 709
           M++TTLSP TPS+LCS K+G+F P QA+++K  +  ++GK KG+ I CMATSIPADRVPD
Sbjct: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATSIPADRVPD 60

Query: 708 MSKRETXXXXXXXXXXLPTAGMLVPYAVFFXXXXXXXXXXGTVAKDALGNDVLAAEWLKV 529
           M KR+           LP+AGMLVPYA FF          GT+AKDA+GNDV+A +WLK 
Sbjct: 61  MEKRKLLNLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKA 120

Query: 528 HGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGSQ 349
           HGPGDRTLTQGLKGDPTYLVVE D+TLATYGINAVCTHLGCVVPFN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQ 180

Query: 348 YNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 208
           YN+QG VVRGPAPLSLALAH D+ DGKV+FVPWVETDFRTG  PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDAPWWA 227


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  342 bits (877), Expect = 8e-92
 Identities = 162/227 (71%), Positives = 181/227 (79%)
 Frame = -1

Query: 888 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADRVPD 709
           MA+TTLSP TPS+LCS K+G+FSP QA+++K  K  ++GK KGM I C ATSIPADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQATSIPADRVPD 60

Query: 708 MSKRETXXXXXXXXXXLPTAGMLVPYAVFFXXXXXXXXXXGTVAKDALGNDVLAAEWLKV 529
           M KR+           LP+AGML+PY  FF          GTVAKDA+GNDV+A  WLK 
Sbjct: 61  MGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 528 HGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGSQ 349
           HGPGDRTL QGLKGDPTYLVVE D+TLATY INAVCTHLGCVVP+N+AENKFICPCHGSQ
Sbjct: 121 HGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 348 YNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 208
           YN+QG V RGPAPLSLALAH DIDDGKV+FVPWVETDFRTG  PWWA
Sbjct: 181 YNDQGRVARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227


>ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|118486166|gb|ABK94926.1|
           unknown [Populus trichocarpa]
           gi|118487342|gb|ABK95499.1| unknown [Populus
           trichocarpa] gi|222862559|gb|EEF00066.1| predicted
           protein [Populus trichocarpa]
          Length = 228

 Score =  342 bits (876), Expect = 1e-91
 Identities = 163/228 (71%), Positives = 185/228 (81%), Gaps = 1/228 (0%)
 Frame = -1

Query: 888 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPAD-RVP 712
           MA++TLSP TPS+LCSSK+GMFSP  AV +K T+TN++ KE+GM I+C ATS+PAD RVP
Sbjct: 1   MASSTLSPATPSQLCSSKSGMFSPTHAVFVKPTRTNMVLKERGMRISCQATSVPADDRVP 60

Query: 711 DMSKRETXXXXXXXXXXLPTAGMLVPYAVFFXXXXXXXXXXGTVAKDALGNDVLAAEWLK 532
           DM KRE           LPTAGMLVPY  FF          GTVAKDALGND++A +WL 
Sbjct: 61  DMGKRELMNLLLLGALSLPTAGMLVPYTYFFVPTGLGGGGGGTVAKDALGNDIVAEQWLN 120

Query: 531 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 352
            HGPGDRTL+QGLKGDPTYLVVE D+ LATYGINAVCTHLGCVVP+N+AE KFICPCHGS
Sbjct: 121 THGPGDRTLSQGLKGDPTYLVVEKDRVLATYGINAVCTHLGCVVPWNQAEKKFICPCHGS 180

Query: 351 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 208
           QYN+QG VVRGPAPLSLALAH D+DDGKV+FVPWVETDFRTG  PWW+
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 228