BLASTX nr result

ID: Coptis23_contig00010128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010128
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39809.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_002533724.1| conserved hypothetical protein [Ricinus comm...   224   4e-57
ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a...   218   4e-55
ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|2...   208   3e-52
gb|EEC80455.1| hypothetical protein OsI_22659 [Oryza sativa Indi...   207   6e-52

>emb|CBI39809.3| unnamed protein product [Vitis vinifera]
          Length = 1808

 Score =  229 bits (583), Expect = 2e-58
 Identities = 114/141 (80%), Positives = 130/141 (92%)
 Frame = +1

Query: 1   SIAKSIVYLLKPGSSSQEYFEKLVNLLEQFYHPSNGGRWTYSLERFLRYLVITFQKRLQH 180
           +IAKS+VYLLK GSS+QE+FEKLVNLLEQ+YHPSNGGRWTYSLERFL YLVITFQKRLQ+
Sbjct: 290 AIAKSVVYLLKVGSSAQEHFEKLVNLLEQYYHPSNGGRWTYSLERFLLYLVITFQKRLQY 349

Query: 181 EQLNIDDKKCAELFLGKSERTSFVEVVLKLINRGQYSKNDSLAETVATATSILSYVEPSL 360
           EQ +ID+ + AEL+LG+SER SFV VVLKLI+RGQYSKN+ L+ETVA ATSILSYVEPSL
Sbjct: 350 EQQDIDNNRQAELYLGRSERMSFVNVVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSL 409

Query: 361 VLPFVESRFHMALETTTATHQ 423
           VLPF+ SRFH+ALET TATHQ
Sbjct: 410 VLPFLASRFHLALETMTATHQ 430


>ref|XP_002533724.1| conserved hypothetical protein [Ricinus communis]
           gi|223526362|gb|EEF28655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1794

 Score =  224 bits (572), Expect = 4e-57
 Identities = 112/141 (79%), Positives = 128/141 (90%)
 Frame = +1

Query: 1   SIAKSIVYLLKPGSSSQEYFEKLVNLLEQFYHPSNGGRWTYSLERFLRYLVITFQKRLQH 180
           +IAKSIVYLLKPGSS+ E+FEKLV+LLEQ+YHPSNGGRWTYSLERFL YLVITFQKRLQ+
Sbjct: 270 AIAKSIVYLLKPGSSALEHFEKLVDLLEQYYHPSNGGRWTYSLERFLLYLVITFQKRLQN 329

Query: 181 EQLNIDDKKCAELFLGKSERTSFVEVVLKLINRGQYSKNDSLAETVATATSILSYVEPSL 360
           EQ + D+   AELFLG+ ERT+FV V+LKLI+RGQYSKN+ L+ETVA ATSILSYVEPSL
Sbjct: 330 EQQSTDNNNPAELFLGRLERTNFVNVLLKLIDRGQYSKNEHLSETVAAATSILSYVEPSL 389

Query: 361 VLPFVESRFHMALETTTATHQ 423
           VLPF+ SRFH+ALET TATHQ
Sbjct: 390 VLPFIASRFHLALETMTATHQ 410


>ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex
           subunit 4-like [Vitis vinifera]
          Length = 1813

 Score =  218 bits (555), Expect = 4e-55
 Identities = 113/146 (77%), Positives = 127/146 (86%), Gaps = 5/146 (3%)
 Frame = +1

Query: 1   SIAKSIVYLLKPGSSSQEYFEKLVNLLEQFYHPSNGGRWTYSLERFLRYLVITFQKRLQH 180
           +IAKS+VYLLK GSS+QE+FEKLVNLLEQ+YHPSNGGRWTYSLERFL YLVITFQKRLQ+
Sbjct: 290 AIAKSVVYLLKVGSSAQEHFEKLVNLLEQYYHPSNGGRWTYSLERFLLYLVITFQKRLQY 349

Query: 181 EQLNIDDKKC-----AELFLGKSERTSFVEVVLKLINRGQYSKNDSLAETVATATSILSY 345
           EQ  +   K      AEL+LG+SER SFV VVLKLI+RGQYSKN+ L+ETVA ATSILSY
Sbjct: 350 EQQXVFTCKMIPDVQAELYLGRSERMSFVNVVLKLIDRGQYSKNEHLSETVAAATSILSY 409

Query: 346 VEPSLVLPFVESRFHMALETTTATHQ 423
           VEPSLVLPF+ SRFH+ALET TATHQ
Sbjct: 410 VEPSLVLPFLASRFHLALETMTATHQ 435


>ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|222847842|gb|EEE85389.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  208 bits (530), Expect = 3e-52
 Identities = 101/138 (73%), Positives = 124/138 (89%)
 Frame = +1

Query: 1   SIAKSIVYLLKPGSSSQEYFEKLVNLLEQFYHPSNGGRWTYSLERFLRYLVITFQKRLQH 180
           +IAKSIVYLLKPGS++Q++FEKL+NLLEQ+YHPSNGGRWTYSLERFL  LVITFQKRLQ 
Sbjct: 290 AIAKSIVYLLKPGSAAQQHFEKLINLLEQYYHPSNGGRWTYSLERFLLNLVITFQKRLQR 349

Query: 181 EQLNIDDKKCAELFLGKSERTSFVEVVLKLINRGQYSKNDSLAETVATATSILSYVEPSL 360
           EQ + D  + A++FLG+SERT FV V+LKL++RGQYSK++ L+ETVA ATSILSYVEP+L
Sbjct: 350 EQQSTDSSRQADMFLGRSERTFFVNVLLKLLDRGQYSKDEHLSETVAAATSILSYVEPTL 409

Query: 361 VLPFVESRFHMALETTTA 414
           VLPF+ SRFH+ALET ++
Sbjct: 410 VLPFLASRFHLALETVSS 427


>gb|EEC80455.1| hypothetical protein OsI_22659 [Oryza sativa Indica Group]
          Length = 1813

 Score =  207 bits (528), Expect = 6e-52
 Identities = 104/141 (73%), Positives = 120/141 (85%)
 Frame = +1

Query: 1   SIAKSIVYLLKPGSSSQEYFEKLVNLLEQFYHPSNGGRWTYSLERFLRYLVITFQKRLQH 180
           +IAKSIVYLLKP S + ++FEKLVN LEQFYHPSNGGRWTYSLERFLRYLV+ F++RLQH
Sbjct: 290 AIAKSIVYLLKPKSLALDHFEKLVNFLEQFYHPSNGGRWTYSLERFLRYLVLYFERRLQH 349

Query: 181 EQLNIDDKKCAELFLGKSERTSFVEVVLKLINRGQYSKNDSLAETVATATSILSYVEPSL 360
           EQ    D K  +  LGK ER  FV+VVLKL++RGQYSK+DSLA+TV+ ATSILSYVEPSL
Sbjct: 350 EQFEALDDKHNQFCLGKEERCGFVKVVLKLLDRGQYSKDDSLADTVSIATSILSYVEPSL 409

Query: 361 VLPFVESRFHMALETTTATHQ 423
           VLPFV + F +ALETTTATHQ
Sbjct: 410 VLPFVATNFQLALETTTATHQ 430


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