BLASTX nr result

ID: Coptis23_contig00010127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010127
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36765.3| unnamed protein product [Vitis vinifera]              321   1e-85
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   321   1e-85
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   311   1e-82
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   311   1e-82
gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   309   4e-82

>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  321 bits (822), Expect = 1e-85
 Identities = 160/192 (83%), Positives = 171/192 (89%), Gaps = 1/192 (0%)
 Frame = +3

Query: 192 DHGTGKSSLIVSAASEAFPQQVPPVLPITRLPADYYPDRVPVTIVDTSSSLENRNKLTQE 371
           D GTGKSSLIV+AA+E FP  V PVLP TRLP D+YPDRVP+TI+DTSSSLENR+ L  E
Sbjct: 61  DRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRVPITIIDTSSSLENRSALADE 120

Query: 372 LKLADAVVLTYACDQPVTLDRLSTFWLLELRRLDVNVPVIVVGCKLDAR-EDTQTSLEQV 548
           L+ ADAVVLTYACDQP TLDRLSTFWL ELRRL+V VPVIVVGCKLD R E+ Q SLEQV
Sbjct: 121 LRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQV 180

Query: 549 MSPIMQQFREIETCIECSAKNLIQVPEVFYYAQKAVLHPTGPLFDQETQTLRPRCVRALK 728
           MSPIMQQFREIETCIECSA   IQ+PEVFYYAQKAVLHPTGPLFDQETQTL+PRCVRALK
Sbjct: 181 MSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALK 240

Query: 729 RIFILCDHDRDG 764
           RIFILCDHDRDG
Sbjct: 241 RIFILCDHDRDG 252


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  321 bits (822), Expect = 1e-85
 Identities = 160/192 (83%), Positives = 171/192 (89%), Gaps = 1/192 (0%)
 Frame = +3

Query: 192 DHGTGKSSLIVSAASEAFPQQVPPVLPITRLPADYYPDRVPVTIVDTSSSLENRNKLTQE 371
           D GTGKSSLIV+AA+E FP  V PVLP TRLP D+YPDRVP+TI+DTSSSLENR+ L  E
Sbjct: 24  DRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRVPITIIDTSSSLENRSALADE 83

Query: 372 LKLADAVVLTYACDQPVTLDRLSTFWLLELRRLDVNVPVIVVGCKLDAR-EDTQTSLEQV 548
           L+ ADAVVLTYACDQP TLDRLSTFWL ELRRL+V VPVIVVGCKLD R E+ Q SLEQV
Sbjct: 84  LRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQV 143

Query: 549 MSPIMQQFREIETCIECSAKNLIQVPEVFYYAQKAVLHPTGPLFDQETQTLRPRCVRALK 728
           MSPIMQQFREIETCIECSA   IQ+PEVFYYAQKAVLHPTGPLFDQETQTL+PRCVRALK
Sbjct: 144 MSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALK 203

Query: 729 RIFILCDHDRDG 764
           RIFILCDHDRDG
Sbjct: 204 RIFILCDHDRDG 215


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  311 bits (797), Expect = 1e-82
 Identities = 155/192 (80%), Positives = 169/192 (88%), Gaps = 1/192 (0%)
 Frame = +3

Query: 192 DHGTGKSSLIVSAASEAFPQQVPPVLPITRLPADYYPDRVPVTIVDTSSSLENRNKLTQE 371
           D GTGKSSLIV+AA++ FP  VPPVLP TRLP D+YPDRVP TI+DTSS  E+  K+ +E
Sbjct: 24  DRGTGKSSLIVTAAADNFPVNVPPVLPPTRLPEDFYPDRVPTTIIDTSSRTEDSAKVAEE 83

Query: 372 LKLADAVVLTYACDQPVTLDRLSTFWLLELRRLDVNVPVIVVGCKLDAR-EDTQTSLEQV 548
           LK ADAVVLTYACDQP TLDRLSTFWL +LR+L+V VPVIVVGCKLD R ED Q SLEQV
Sbjct: 84  LKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQV 143

Query: 549 MSPIMQQFREIETCIECSAKNLIQVPEVFYYAQKAVLHPTGPLFDQETQTLRPRCVRALK 728
           MSPIMQQFREIETCIECSA   IQ+PEVFYYAQKAVLHPTGPLFDQETQTL+PRCVRALK
Sbjct: 144 MSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALK 203

Query: 729 RIFILCDHDRDG 764
           RIFILCDHD+DG
Sbjct: 204 RIFILCDHDKDG 215


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  311 bits (797), Expect = 1e-82
 Identities = 155/192 (80%), Positives = 169/192 (88%), Gaps = 1/192 (0%)
 Frame = +3

Query: 192 DHGTGKSSLIVSAASEAFPQQVPPVLPITRLPADYYPDRVPVTIVDTSSSLENRNKLTQE 371
           D GTGKSSLIV+AA++ FP  VPPVLP TRLP D+YPDRVP TI+DTSS  E+  K+ +E
Sbjct: 24  DRGTGKSSLIVTAAADNFPVNVPPVLPPTRLPEDFYPDRVPTTIIDTSSRTEDSAKVAEE 83

Query: 372 LKLADAVVLTYACDQPVTLDRLSTFWLLELRRLDVNVPVIVVGCKLDAR-EDTQTSLEQV 548
           LK ADAVVLTYACDQP TLDRLSTFWL +LR+L+V VPVIVVGCKLD R ED Q SLEQV
Sbjct: 84  LKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQV 143

Query: 549 MSPIMQQFREIETCIECSAKNLIQVPEVFYYAQKAVLHPTGPLFDQETQTLRPRCVRALK 728
           MSPIMQQFREIETCIECSA   IQ+PEVFYYAQKAVLHPTGPLFDQETQTL+PRCVRALK
Sbjct: 144 MSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALK 203

Query: 729 RIFILCDHDRDG 764
           RIFILCDHD+DG
Sbjct: 204 RIFILCDHDKDG 215


>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  309 bits (792), Expect = 4e-82
 Identities = 154/192 (80%), Positives = 169/192 (88%), Gaps = 1/192 (0%)
 Frame = +3

Query: 192 DHGTGKSSLIVSAASEAFPQQVPPVLPITRLPADYYPDRVPVTIVDTSSSLENRNKLTQE 371
           D GTGKSSLIV+AA++ FP  VPPVLP TRLP D+YPDRVP TI+DTSS  E+  K+ +E
Sbjct: 24  DRGTGKSSLIVTAAADNFPVNVPPVLPPTRLPEDFYPDRVPTTIIDTSSRTEDSAKVAEE 83

Query: 372 LKLADAVVLTYACDQPVTLDRLSTFWLLELRRLDVNVPVIVVGCKLDAR-EDTQTSLEQV 548
           LK ADAVVLTYACDQP TLDRLSTFWL +LR+L+V VPVIVVGCKLD R E+ Q SLEQV
Sbjct: 84  LKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDENQQVSLEQV 143

Query: 549 MSPIMQQFREIETCIECSAKNLIQVPEVFYYAQKAVLHPTGPLFDQETQTLRPRCVRALK 728
           MSPIMQQFREIETCIECSA   IQ+PEVFYYAQKAVLHPTGPLFDQETQTL+PRCVRALK
Sbjct: 144 MSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALK 203

Query: 729 RIFILCDHDRDG 764
           RIFILCDHD+DG
Sbjct: 204 RIFILCDHDKDG 215


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