BLASTX nr result

ID: Coptis23_contig00010124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010124
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 ...   417   e-114
ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_002521990.1| conserved hypothetical protein [Ricinus comm...   408   e-112
dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]                        406   e-111

>ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|222858035|gb|EEE95582.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  424 bits (1089), Expect = e-116
 Identities = 211/289 (73%), Positives = 237/289 (82%)
 Frame = +1

Query: 106 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYDDEFFALLM 285
           MLFQVGGQG RPTFFEMAAAQQLPASLRAALTYSIGV+ALRRPFLHKVLD +DEFF+LLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDCEDEFFSLLM 60

Query: 286 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKEGDRLHHSGLEKHQRVLSVAF 465
           LVLETHSLRTT+ASFAESLYGLRRRAVK++V K+++R K GD + HSGLEKHQR+LSV F
Sbjct: 61  LVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVF 120

Query: 466 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 645
           LVVLPYFKSKLHSIYNKEREA LQASLWG  D   +D++YF  G+ S V+  TL +E + 
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATI 180

Query: 646 WTRIQKRIGAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 825
             R+ K+I  I+ +CYPW+HA +EG++FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE 240

Query: 826 LMDTXXXXXXXXXXXXXXXXGPPWLKTLQRVLLSCMYTTLDYAQTGLIA 972
           LMDT                GPPWLKT Q  LLSC YT LDYAQTGLIA
Sbjct: 241 LMDTSSRISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIA 289


>ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 [Vitis vinifera]
           gi|302143588|emb|CBI22341.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  417 bits (1073), Expect = e-114
 Identities = 211/289 (73%), Positives = 232/289 (80%)
 Frame = +1

Query: 106 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYDDEFFALLM 285
           MLFQVGGQG RPTFFEM+AAQQLPASLRAALTYSIGVLALRRPFLH+VLDY+DEFFALLM
Sbjct: 1   MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSIGVLALRRPFLHRVLDYEDEFFALLM 60

Query: 286 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKEGDRLHHSGLEKHQRVLSVAF 465
           LVLE+HSLRTT+ASF+ESLYGLRRRAV+++V KDN+ +   D +HHSGLEK+Q+ LSV F
Sbjct: 61  LVLESHSLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLF 120

Query: 466 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 645
           LVVLPYFKSKLHS+YNKEREATLQASLWG  D RFDD+DYF     S + +     E S 
Sbjct: 121 LVVLPYFKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSV 180

Query: 646 WTRIQKRIGAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 825
             R+ KR    IG  YPW+HAGNEGL+FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKRFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 826 LMDTXXXXXXXXXXXXXXXXGPPWLKTLQRVLLSCMYTTLDYAQTGLIA 972
           LMDT                GPPWLK LQ  LLSC YT LDYAQTGLIA
Sbjct: 241 LMDTSSRISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIA 289


>ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|222862649|gb|EEF00156.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  410 bits (1055), Expect = e-112
 Identities = 209/289 (72%), Positives = 231/289 (79%)
 Frame = +1

Query: 106 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYDDEFFALLM 285
           MLFQVGGQG RPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLD++DEFF+LLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDHEDEFFSLLM 60

Query: 286 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKEGDRLHHSGLEKHQRVLSVAF 465
           LVLETHSLRTT+ASF+ESLYGLRRR VK++V K++ R   GD + HSGLEKHQR+LSV F
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVF 120

Query: 466 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 645
           LVVLPYFKSKL+SIYNKEREA LQASLWG  D   +D++YF  GE S V     S E + 
Sbjct: 121 LVVLPYFKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFSGGEASLV-----SRETTI 175

Query: 646 WTRIQKRIGAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 825
             R+ K+I  I+  CYPW+HA NEG++FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 176 RARLMKKIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 235

Query: 826 LMDTXXXXXXXXXXXXXXXXGPPWLKTLQRVLLSCMYTTLDYAQTGLIA 972
           LMDT                GPPWLK LQ  LLSC YT LDYAQTGLIA
Sbjct: 236 LMDTTSRISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIA 284


>ref|XP_002521990.1| conserved hypothetical protein [Ricinus communis]
           gi|223538794|gb|EEF40394.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  408 bits (1049), Expect = e-112
 Identities = 208/289 (71%), Positives = 230/289 (79%)
 Frame = +1

Query: 106 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYDDEFFALLM 285
           MLFQVGGQG RPTFFEMAAAQQLP SLRAALTYSIGVLALRRP LHKVLDY+DEFFAL M
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPTSLRAALTYSIGVLALRRPLLHKVLDYEDEFFALFM 60

Query: 286 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKEGDRLHHSGLEKHQRVLSVAF 465
           LVLETHSLRTT+ASF+ESLYGLRRR VK++V K ++R   GD +  SGL+K QR+LSVAF
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRGVKIQVKKKDARLNLGDGIELSGLQKRQRILSVAF 120

Query: 466 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 645
           LVVLPYFKSKL+S+YNKEREA LQASLWG     F+ +DYFD  + S V+ GT+ SE + 
Sbjct: 121 LVVLPYFKSKLYSLYNKEREARLQASLWGDGGGPFEGTDYFDRDDGSLVSRGTMESEATI 180

Query: 646 WTRIQKRIGAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 825
             R+ KRI  II ACYPW+HA +EGL+F YQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RARLTKRIQKIIFACYPWVHATSEGLSFTYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 826 LMDTXXXXXXXXXXXXXXXXGPPWLKTLQRVLLSCMYTTLDYAQTGLIA 972
           LMDT                GPPWLKTLQ  LLSC Y  LDYAQTGLIA
Sbjct: 241 LMDTSSRISKIRSRERERLRGPPWLKTLQGALLSCTYAVLDYAQTGLIA 289


>dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]
          Length = 393

 Score =  406 bits (1044), Expect = e-111
 Identities = 203/289 (70%), Positives = 228/289 (78%)
 Frame = +1

Query: 106 MLFQVGGQGVRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYDDEFFALLM 285
           MLFQVGGQG RPTFFEMAAAQQLP+SLRAALTYS+GVLALRRPF+HK+LDY+DE FALLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLM 60

Query: 286 LVLETHSLRTTEASFAESLYGLRRRAVKLKVSKDNSRTKEGDRLHHSGLEKHQRVLSVAF 465
           LVLETHSLRTT+ SFAESLYGLRRRAVK+KV  DN      + ++H+GLEK Q+VLSV F
Sbjct: 61  LVLETHSLRTTDGSFAESLYGLRRRAVKIKVKGDNKGPDVREEINHTGLEKRQKVLSVVF 120

Query: 466 LVVLPYFKSKLHSIYNKEREATLQASLWGPSDVRFDDSDYFDSGETSHVTSGTLSSEGSR 645
           LV+LPY +SKLHSIYNKERE  LQA+LWG  D RF D+DYFD    S V+  +  +E S 
Sbjct: 121 LVILPYLRSKLHSIYNKEREVALQATLWGHEDERFGDTDYFDGAGNSTVSMSSSDAEESV 180

Query: 646 WTRIQKRIGAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHALGIHVCRATGQE 825
             R++K+I  I+ ACYPWIHAGNEG +FAYQLLYLLDATGFYS GLHALGIHVCRATGQE
Sbjct: 181 RDRLRKKIRKIVAACYPWIHAGNEGFSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 826 LMDTXXXXXXXXXXXXXXXXGPPWLKTLQRVLLSCMYTTLDYAQTGLIA 972
           LMDT                GPPWLK +Q  LLSC Y  LDYAQTGLIA
Sbjct: 241 LMDTSSRISKIRSHERERLRGPPWLKAVQSGLLSCAYGVLDYAQTGLIA 289


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