BLASTX nr result

ID: Coptis23_contig00010119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010119
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866085.1| ATP synthase subunit H family protein [Arabi...    69   5e-10
ref|NP_568823.1| ATPase, V0 complex, subunit E [Arabidopsis thal...    68   7e-10
ref|XP_002278381.1| PREDICTED: uncharacterized protein LOC100256...    68   9e-10
ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|1...    67   2e-09
ref|XP_003532155.1| PREDICTED: uncharacterized protein LOC100527...    66   3e-09

>ref|XP_002866085.1| ATP synthase subunit H family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297311920|gb|EFH42344.1| ATP synthase subunit
           H family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 70

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +1

Query: 88  MGFLLTSIIFLVVGIVAALFMRICCNRGPSANLLHLTLV 204
           MGFL+T++IF+VVGI+AAL  RICCNRGPS NLLHLTLV
Sbjct: 1   MGFLITTLIFVVVGIIAALCARICCNRGPSTNLLHLTLV 39


>ref|NP_568823.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana]
           gi|238481571|ref|NP_001154781.1| ATPase, V0 complex,
           subunit E [Arabidopsis thaliana]
           gi|13926255|gb|AAK49600.1|AF372884_1 AT5g55290/MCO15_24
           [Arabidopsis thaliana] gi|9758126|dbj|BAB08598.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|16323226|gb|AAL15347.1| AT5g55290/MCO15_24
           [Arabidopsis thaliana] gi|227204441|dbj|BAH57072.1|
           AT5G55290 [Arabidopsis thaliana]
           gi|332009227|gb|AED96610.1| ATPase, V0 complex, subunit
           E [Arabidopsis thaliana] gi|332009228|gb|AED96611.1|
           ATPase, V0 complex, subunit E [Arabidopsis thaliana]
          Length = 70

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +1

Query: 88  MGFLLTSIIFLVVGIVAALFMRICCNRGPSANLLHLTLV 204
           MGFL+T++IF+VVGI+A+L +RICCNRGPS NLLHLTLV
Sbjct: 1   MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLV 39


>ref|XP_002278381.1| PREDICTED: uncharacterized protein LOC100256926 [Vitis vinifera]
           gi|297741815|emb|CBI33120.3| unnamed protein product
           [Vitis vinifera]
          Length = 70

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/39 (74%), Positives = 37/39 (94%)
 Frame = +1

Query: 88  MGFLLTSIIFLVVGIVAALFMRICCNRGPSANLLHLTLV 204
           MGF +T++IF++VGI+A+L +RICCNRGPSANLLHLTLV
Sbjct: 1   MGFFVTTLIFIMVGIIASLMVRICCNRGPSANLLHLTLV 39


>ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|118481681|gb|ABK92781.1|
           unknown [Populus trichocarpa]
           gi|222860419|gb|EEE97966.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +1

Query: 88  MGFLLTSIIFLVVGIVAALFMRICCNRGPSANLLHLTLV 204
           MGFL+T++IF+VVGI+A+L  RICCNRGPS NLLHLTLV
Sbjct: 1   MGFLVTTLIFVVVGIIASLCTRICCNRGPSTNLLHLTLV 39


>ref|XP_003532155.1| PREDICTED: uncharacterized protein LOC100527598 [Glycine max]
          Length = 70

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +1

Query: 88  MGFLLTSIIFLVVGIVAALFMRICCNRGPSANLLHLTLV 204
           MGFL+T++IF+V+GI+A L  RICCNRGPSANL HLTLV
Sbjct: 1   MGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLV 39


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