BLASTX nr result

ID: Coptis23_contig00010104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010104
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   112   1e-22
ref|XP_002509637.1| ESC, putative [Ricinus communis] gi|22354953...   112   2e-22
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891...   109   1e-21
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21

>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  112 bits (281), Expect = 1e-22
 Identities = 70/128 (54%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
 Frame = -3

Query: 740 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXQNSEDDE-GNSGLXXXX 564
           MD VTA  HGHSLPPPFHTRDL L                    NSED++ G+SGL    
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDLHLHHQQQHQFHPQQQ-------NSEDEQSGSSGLNRGQ 51

Query: 563 XXXXXXXXXXXDS----QDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR 396
                      +      +MV LSG DGEI+RRPRGRPAGSKNKPKPPIIITRDSANALR
Sbjct: 52  KRDRDDNNENTNGGSEGNEMVGLSG-DGEISRRPRGRPAGSKNKPKPPIIITRDSANALR 110

Query: 395 AHVMQIIE 372
            HVM+I +
Sbjct: 111 THVMEIAD 118


>ref|XP_002509637.1| ESC, putative [Ricinus communis] gi|223549536|gb|EEF51024.1| ESC,
           putative [Ricinus communis]
          Length = 298

 Score =  112 bits (279), Expect = 2e-22
 Identities = 63/123 (51%), Positives = 70/123 (56%)
 Frame = -3

Query: 740 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXQNSEDDEGNSGLXXXXX 561
           MD VTA  HGHSLPPPFHTRD QL                    NSED++  S       
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHHHQQQQQQFSHHHQQQ---NSEDEQSGSSSGAGLN 55

Query: 560 XXXXXXXXXXDSQDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRAHVMQ 381
                          +  SGG GEITRRPRGRPAGSKNKPKPPIIITRDSANALR H+M+
Sbjct: 56  KSQKRERDEGSEGKELIPSGGSGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHLME 115

Query: 380 IIE 372
           + +
Sbjct: 116 VAD 118


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  112 bits (279), Expect = 2e-22
 Identities = 65/128 (50%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
 Frame = -3

Query: 740 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSGLXXX 567
           MD VTA  HGHSLPPPFHTRD QL                    NSED++   +SGL   
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHQQQQQQHQFHHQQQQ----NSEDEQSGSSSGLNKS 54

Query: 566 XXXXXXXXXXXXDS---QDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR 396
                        +   Q+++    GDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR
Sbjct: 55  LKRERDESNNSMGNREGQELITSGDGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR 114

Query: 395 AHVMQIIE 372
            H+M++ +
Sbjct: 115 THLMEVAD 122


>ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC,
           putative [Ricinus communis]
          Length = 299

 Score =  109 bits (272), Expect = 1e-21
 Identities = 63/127 (49%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -3

Query: 740 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXQNSEDDEGNSGLXXXXX 561
           MD V  +AHG  LPPPFHTRDL L                    NSED++  +G      
Sbjct: 1   MDPV--AAHGRPLPPPFHTRDLHLHPHHQFQHHHQQQQQQQ---NSEDEQTGNGSINRGQ 55

Query: 560 XXXXXXXXXXDSQDMVALSGG-DGEITRRPRGRPAGSKNKPKPPIIITRDSANALRAHVM 384
                     + +++V  +GG DGE+TRRPRGRPAGSKNKPKPPIIITRDSANALR+HVM
Sbjct: 56  KREHDEITTPEGKELVPTTGGGDGEMTRRPRGRPAGSKNKPKPPIIITRDSANALRSHVM 115

Query: 383 QIIEWSE 363
           +I   S+
Sbjct: 116 EIANGSD 122


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  108 bits (269), Expect = 3e-21
 Identities = 62/128 (48%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
 Frame = -3

Query: 740 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSGLXXX 567
           MD VTA  HGHSLPPPFHTRD QL                    NSED++   +SGL   
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQ---NSEDEQSGSSSGLNKS 55

Query: 566 XXXXXXXXXXXXDS---QDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR 396
                        +   ++++    G+GEITRRPRGRP+GSKNKPKPPIIITRDSANALR
Sbjct: 56  LKRERDENNNSMGNSEGKELITSGSGEGEITRRPRGRPSGSKNKPKPPIIITRDSANALR 115

Query: 395 AHVMQIIE 372
            H+M++ +
Sbjct: 116 THLMEVAD 123


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