BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010089
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   130   2e-35
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              130   2e-35
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi...   123   5e-32
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati...   121   3e-31
gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japo...   121   3e-31

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
            [Vitis vinifera]
          Length = 1101

 Score =  130 bits (328), Expect(2) = 2e-35
 Identities = 69/161 (42%), Positives = 101/161 (62%)
 Frame = +2

Query: 2    DGLVPGTVLYSILINQSCKEGEVSFAFRLADLMKRNHIERDLMTFGSLVSGVCSNISRAG 181
            DG VP TVLY+ LINQ  ++GE+ FAFRL DLM RN IE D++T  +LVSGV  NI+   
Sbjct: 683  DGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVR 742

Query: 182  RRYHVVDRRSKKAGEMIFQLLNLLILMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVV 361
            RR++ V   S +  E++  LL+   ++P E+          +  Y A  LM+ I  +  +
Sbjct: 743  RRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFM 802

Query: 362  FNLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHVTY 484
             NL+ YN +I+G+CRA+M++DAY + ELMQ +G+    VT+
Sbjct: 803  PNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTF 843



 Score = 45.1 bits (105), Expect(2) = 2e-35
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
 Frame = +3

Query: 486  GHIRHGQIGQAIPLFNNMSETGCLPDKITQHSYRR------------SMQEWESS*GLIP 629
            GH R G+I  AI LFN M+  G  PD IT ++  +            S+       GL P
Sbjct: 849  GHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFP 908

Query: 630  SKVSYERLLSACC 668
            +K SYE+LL   C
Sbjct: 909  NKSSYEKLLKCLC 921


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  130 bits (328), Expect(2) = 2e-35
 Identities = 69/161 (42%), Positives = 101/161 (62%)
 Frame = +2

Query: 2    DGLVPGTVLYSILINQSCKEGEVSFAFRLADLMKRNHIERDLMTFGSLVSGVCSNISRAG 181
            DG VP TVLY+ LINQ  ++GE+ FAFRL DLM RN IE D++T  +LVSGV  NI+   
Sbjct: 563  DGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVR 622

Query: 182  RRYHVVDRRSKKAGEMIFQLLNLLILMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVV 361
            RR++ V   S +  E++  LL+   ++P E+          +  Y A  LM+ I  +  +
Sbjct: 623  RRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFM 682

Query: 362  FNLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHVTY 484
             NL+ YN +I+G+CRA+M++DAY + ELMQ +G+    VT+
Sbjct: 683  PNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTF 723



 Score = 45.1 bits (105), Expect(2) = 2e-35
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
 Frame = +3

Query: 486 GHIRHGQIGQAIPLFNNMSETGCLPDKITQHSYRR------------SMQEWESS*GLIP 629
           GH R G+I  AI LFN M+  G  PD IT ++  +            S+       GL P
Sbjct: 729 GHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFP 788

Query: 630 SKVSYERLLSACC 668
           +K SYE+LL   C
Sbjct: 789 NKSSYEKLLKCLC 801


>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
          Length = 481

 Score =  123 bits (309), Expect(2) = 5e-32
 Identities = 63/161 (39%), Positives = 105/161 (65%)
 Frame = +2

Query: 2   DGLVPGTVLYSILINQSCKEGEVSFAFRLADLMKRNHIERDLMTFGSLVSGVCSNISRAG 181
           +G+ P TV+Y++LINQ  ++G+V     L  LM + ++  DL+T+G+LV+G+C NI+R G
Sbjct: 154 EGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVAGICRNIARRG 213

Query: 182 RRYHVVDRRSKKAGEMIFQLLNLLILMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVV 361
            R  + D++ K+A  M+F++L  +I      K++ +   TEE I +A+ +++D+  NG+V
Sbjct: 214 MRPSL-DKKLKEARYMLFRMLPQII-DTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMV 271

Query: 362 FNLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHVTY 484
            +LH YN +ING CRA+ + DAY  + +M   G+   HVTY
Sbjct: 272 PDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTY 312



 Score = 40.8 bits (94), Expect(2) = 5e-32
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
 Frame = +3

Query: 492 IRHGQIGQAIPLFNNMSETGCLPDKITQHSYRRS------MQEWES------S*GLIPSK 635
           IR G I  AI LFN+++  GC+ DKIT +++ +       M+E  S        G +PSK
Sbjct: 320 IRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSK 379

Query: 636 VSYERLL 656
            SY++L+
Sbjct: 380 ASYDKLM 386


>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
            hypothetical protein LOC_Os10g02650 [Oryza sativa
            Japonica Group]
          Length = 949

 Score =  121 bits (303), Expect(2) = 3e-31
 Identities = 62/161 (38%), Positives = 104/161 (64%)
 Frame = +2

Query: 2    DGLVPGTVLYSILINQSCKEGEVSFAFRLADLMKRNHIERDLMTFGSLVSGVCSNISRAG 181
            +G+ P TV+Y++LINQ  ++G+V     L  LM + ++  DL+T+G+LV+G+C NI+R G
Sbjct: 602  EGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRG 661

Query: 182  RRYHVVDRRSKKAGEMIFQLLNLLILMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVV 361
             R  +  ++ K+A  M+F++L  +I      K++ +   TEE I +A+ +++D+  NG+V
Sbjct: 662  MRPSLA-KKLKEARYMLFRMLPQII-DTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMV 719

Query: 362  FNLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHVTY 484
             +LH YN +ING CRA+ + DAY  + +M   G+   HVTY
Sbjct: 720  PDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTY 760



 Score = 40.8 bits (94), Expect(2) = 3e-31
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
 Frame = +3

Query: 492 IRHGQIGQAIPLFNNMSETGCLPDKITQHSYRRS------MQEWES------S*GLIPSK 635
           IR G I  AI LFN+++  GC+ DKIT +++ +       M+E  S        G +PSK
Sbjct: 768 IRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSK 827

Query: 636 VSYERLL 656
            SY++L+
Sbjct: 828 ASYDKLM 834


>gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  121 bits (303), Expect(2) = 3e-31
 Identities = 62/161 (38%), Positives = 104/161 (64%)
 Frame = +2

Query: 2    DGLVPGTVLYSILINQSCKEGEVSFAFRLADLMKRNHIERDLMTFGSLVSGVCSNISRAG 181
            +G+ P TV+Y++LINQ  ++G+V     L  LM + ++  DL+T+G+LV+G+C NI+R G
Sbjct: 579  EGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRG 638

Query: 182  RRYHVVDRRSKKAGEMIFQLLNLLILMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVV 361
             R  +  ++ K+A  M+F++L  +I      K++ +   TEE I +A+ +++D+  NG+V
Sbjct: 639  MRPSLA-KKLKEARYMLFRMLPQII-DTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMV 696

Query: 362  FNLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHVTY 484
             +LH YN +ING CRA+ + DAY  + +M   G+   HVTY
Sbjct: 697  PDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTY 737



 Score = 40.8 bits (94), Expect(2) = 3e-31
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
 Frame = +3

Query: 492 IRHGQIGQAIPLFNNMSETGCLPDKITQHSYRRS------MQEWES------S*GLIPSK 635
           IR G I  AI LFN+++  GC+ DKIT +++ +       M+E  S        G +PSK
Sbjct: 745 IRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSK 804

Query: 636 VSYERLL 656
            SY++L+
Sbjct: 805 ASYDKLM 811