BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010086
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [V...    95   5e-18
emb|CBI37249.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ri...    86   2e-15
ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [G...    77   1e-12

>ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|222844816|gb|EEE82363.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +1

Query: 61  LSRPMMPFPQVLAGSSMPRPAAAAYLGPRLPIPAYHLPTGSSPGVSTIRP-NLSHPSFNS 237
           LSRPMMPFP +LAG+    PAAAA+L PR P+P +H+P   +P  S ++P N   P   S
Sbjct: 456 LSRPMMPFPNILAGAPSATPAAAAHLVPRFPVPPFHVPPIPAPDPSRVQPTNQVDPMLGS 515

Query: 238 LGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQPSSSEGLQSR 393
            G Q + NQ +  NF D YQHYL LY M  P   P+  +M QPS+S+   SR
Sbjct: 516 PG-QQNPNQPRVPNFVDPYQHYLGLYQMHLPGV-PRNQAMAQPSTSKPSTSR 565


>ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
          Length = 517

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/119 (48%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
 Frame = +1

Query: 61  LSRPMMPFPQVLAGSSMPRPAAAAYLGPRLPIPAYHLPTGSSPGVSTIRP-NLSHPSFNS 237
           ++RPMMPFP VL GS++P  AAAA+LG R P+PA+H+P  ++P  S I+  N S P  NS
Sbjct: 399 MNRPMMPFPSVLGGSTLPTTAAAAHLGQRYPMPAFHMPHMAAPDSSRIQANNQSDPVLNS 458

Query: 238 LGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQ-----PSSSEGLQSREN 399
           LG QSS NQ +  NF D Y  YL    MQ P  P Q  +M Q     PS+S+G ++ EN
Sbjct: 459 LGTQSS-NQPRVPNFADPYLQYLQ--QMQMP--PAQNQAMGQQNTSKPSTSKGTENLEN 512


>emb|CBI37249.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/119 (48%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
 Frame = +1

Query: 61  LSRPMMPFPQVLAGSSMPRPAAAAYLGPRLPIPAYHLPTGSSPGVSTIRP-NLSHPSFNS 237
           ++RPMMPFP VL GS++P  AAAA+LG R P+PA+H+P  ++P  S I+  N S P  NS
Sbjct: 361 MNRPMMPFPSVLGGSTLPTTAAAAHLGQRYPMPAFHMPHMAAPDSSRIQANNQSDPVLNS 420

Query: 238 LGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQ-----PSSSEGLQSREN 399
           LG QSS NQ +  NF D Y  YL    MQ P  P Q  +M Q     PS+S+G ++ EN
Sbjct: 421 LGTQSS-NQPRVPNFADPYLQYLQ--QMQMP--PAQNQAMGQQNTSKPSTSKGTENLEN 474


>ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
           gi|223539719|gb|EEF41301.1| Phytochrome-interacting
           factor, putative [Ricinus communis]
          Length = 572

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
 Frame = +1

Query: 61  LSRPMMPFPQVLAGSSMP-RPAAAAYLGPRLPIPAYHLPTGSSPGVSTIR-PNLSHPSFN 234
           +SRPMMPFP VL+G+ +P + AAAA+LGPR  +PA+H+P   +P  S I+  + S P  +
Sbjct: 451 MSRPMMPFPNVLSGAPLPTQAAAAAHLGPRFHMPAFHMPPVPAPDPSRIQAASQSDPMVS 510

Query: 235 SLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQPSSSE--GLQSRENL 402
           ++  Q + NQ +  NF D YQ YL L  +Q P   P+  +M QPS+S+    Q  ENL
Sbjct: 511 AISTQ-NPNQPRLPNFVDPYQQYLGLQQLQIP--VPENQAMAQPSTSKPGANQGAENL 565


>ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 491

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = +1

Query: 61  LSRPMMPFPQVLAGSSMPRPAAAAYLGPRLPIPAYHLPTGSSPGVSTIRPNLSHPS---F 231
           ++R +MPFP +LA S++P   A A+LGPR P+P +H+P  ++P  S ++   +HP     
Sbjct: 371 MNRSVMPFPNMLASSTLPAATATAHLGPRFPMPPFHMPHVATPDSSRMQ-GANHPDNNML 429

Query: 232 NSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMP---QPSSSEGLQSRE 396
           NSLG         P NFTD YQ YLSL   QA     QT + P   +PS+S G ++ E
Sbjct: 430 NSLGTLDPDQSCIP-NFTDPYQQYLSL--QQAQLQLMQTMNQPNVSKPSTSRGQENPE 484