BLASTX nr result

ID: Coptis23_contig00010081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010081
         (1585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37243.3| unnamed protein product [Vitis vinifera]              332   2e-88
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   332   2e-88
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]   332   2e-88
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...   329   1e-87
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...   327   7e-87

>emb|CBI37243.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  332 bits (850), Expect = 2e-88
 Identities = 167/192 (86%), Positives = 182/192 (94%)
 Frame = +2

Query: 851  QYFNQILTVVLEVLDDPDSSIRELALSLLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVA 1030
            +YFNQILT +LE+LDD DSSIRELALSL+VEML NQK SM+DSVE+V+EKLLHV KD+V 
Sbjct: 82   KYFNQILTAILEILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVP 141

Query: 1031 KVSSEAERCLTIVLCQYDPFRCLTVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEELMAQ 1210
            KVS+EAE CLTIVL QYDPFRCL+VI+PLLV+EDEKTLVTCINCLTKLVGRLSQEE+MAQ
Sbjct: 142  KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 201

Query: 1211 LSSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIYANRI 1390
            L SFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGK+FLPYLEGLNSTQLRLVTIYANRI
Sbjct: 202  LPSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRI 261

Query: 1391 SQARSGTTIDAN 1426
            SQAR+G TIDAN
Sbjct: 262  SQARTGATIDAN 273


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  332 bits (850), Expect = 2e-88
 Identities = 167/192 (86%), Positives = 182/192 (94%)
 Frame = +2

Query: 851  QYFNQILTVVLEVLDDPDSSIRELALSLLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVA 1030
            +YFNQILT +LE+LDD DSSIRELALSL+VEML NQK SM+DSVE+V+EKLLHV KD+V 
Sbjct: 1247 KYFNQILTAILEILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVP 1306

Query: 1031 KVSSEAERCLTIVLCQYDPFRCLTVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEELMAQ 1210
            KVS+EAE CLTIVL QYDPFRCL+VI+PLLV+EDEKTLVTCINCLTKLVGRLSQEE+MAQ
Sbjct: 1307 KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 1366

Query: 1211 LSSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIYANRI 1390
            L SFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGK+FLPYLEGLNSTQLRLVTIYANRI
Sbjct: 1367 LPSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRI 1426

Query: 1391 SQARSGTTIDAN 1426
            SQAR+G TIDAN
Sbjct: 1427 SQARTGATIDAN 1438


>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score =  332 bits (850), Expect = 2e-88
 Identities = 167/192 (86%), Positives = 182/192 (94%)
 Frame = +2

Query: 851  QYFNQILTVVLEVLDDPDSSIRELALSLLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVA 1030
            +YFNQILT +LE+LDD DSSIRELALSL+VEML NQK SM+DSVE+V+EKLLHV KD+V 
Sbjct: 942  KYFNQILTAILEILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVP 1001

Query: 1031 KVSSEAERCLTIVLCQYDPFRCLTVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEELMAQ 1210
            KVS+EAE CLTIVL QYDPFRCL+VI+PLLV+EDEKTLVTCINCLTKLVGRLSQEE+MAQ
Sbjct: 1002 KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 1061

Query: 1211 LSSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIYANRI 1390
            L SFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGK+FLPYLEGLNSTQLRLVTIYANRI
Sbjct: 1062 LPSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRI 1121

Query: 1391 SQARSGTTIDAN 1426
            SQAR+G TIDAN
Sbjct: 1122 SQARTGATIDAN 1133


>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
            gi|223539723|gb|EEF41305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score =  329 bits (844), Expect = 1e-87
 Identities = 166/197 (84%), Positives = 185/197 (93%)
 Frame = +2

Query: 839  TVCGQYFNQILTVVLEVLDDPDSSIRELALSLLVEMLTNQKDSMDDSVEVVLEKLLHVNK 1018
            +V  +YFNQILT VLEVLDD +SSIRELALSL+VEML NQKD+++DS+EVV+EKLLHV K
Sbjct: 1187 SVWSKYFNQILTAVLEVLDDAESSIRELALSLIVEMLKNQKDAVEDSIEVVIEKLLHVTK 1246

Query: 1019 DMVAKVSSEAERCLTIVLCQYDPFRCLTVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEE 1198
            D+V KVS+EAE CL+IVL QYDPFRCL+VIVPLLV+EDEKTLVTCINCLTKLVGRLSQEE
Sbjct: 1247 DVVPKVSNEAEHCLSIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEE 1306

Query: 1199 LMAQLSSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIY 1378
            LM QL SFLPALF+AFGNQSADVRKTVVFCLVDIYIMLGK+FLPYLEGLNSTQLRLVTIY
Sbjct: 1307 LMTQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIY 1366

Query: 1379 ANRISQARSGTTIDANH 1429
            ANRISQAR+GT I+A+H
Sbjct: 1367 ANRISQARTGTAIEASH 1383


>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
            predicted protein [Populus trichocarpa]
          Length = 1426

 Score =  327 bits (837), Expect = 7e-87
 Identities = 163/197 (82%), Positives = 182/197 (92%)
 Frame = +2

Query: 839  TVCGQYFNQILTVVLEVLDDPDSSIRELALSLLVEMLTNQKDSMDDSVEVVLEKLLHVNK 1018
            +V  +YFNQILT VLEVLDD DSSIREL LSL+VEML NQKD+M+DS+E+ +EKLLHV +
Sbjct: 1229 SVWSKYFNQILTAVLEVLDDSDSSIRELTLSLIVEMLKNQKDAMEDSIEIAIEKLLHVTE 1288

Query: 1019 DMVAKVSSEAERCLTIVLCQYDPFRCLTVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEE 1198
            D+V KVS+EAE CLT+ L QYDPFRCL+VIVPLLV+EDEKTLVTCINCLTKLVGRLSQEE
Sbjct: 1289 DIVPKVSNEAEHCLTVALSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEE 1348

Query: 1199 LMAQLSSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIY 1378
            LM QL SFLPALF+AFGNQSADVRKTVVFCLVDIYIMLGK+FLP+LEGLNSTQLRLVTIY
Sbjct: 1349 LMVQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIY 1408

Query: 1379 ANRISQARSGTTIDANH 1429
            ANRISQAR+GT IDA+H
Sbjct: 1409 ANRISQARTGTAIDASH 1425


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