BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010068
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vi...   326   4e-87
ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
ref|XP_002516448.1| conserved hypothetical protein [Ricinus comm...   305   8e-81
ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago ...   296   5e-78
ref|XP_003544530.1| PREDICTED: uncharacterized protein ycf36-lik...   293   4e-77

>ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
          Length = 268

 Score =  326 bits (836), Expect = 4e-87
 Identities = 177/271 (65%), Positives = 201/271 (74%), Gaps = 14/271 (5%)
 Frame = +1

Query: 40  MATLSILSPKPPLKTIFLHN------PISINKQTTLPNLQHKHTIILSSK---SSSFR-- 186
           MAT   LS K    T F  +      PI+  K    P+L ++   IL S+   SSSF   
Sbjct: 1   MATPLFLSTKSTQLTFFFPSKPNFLPPINPIKN---PSLHYRDQKILISRIPLSSSFTNG 57

Query: 187 ---PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPV 357
              PPE ECPVP DQQPINEYQ+LS+SFPFSWA + D VEY  RL  TG SFA FIGLPV
Sbjct: 58  SNTPPETECPVPLDQQPINEYQTLSTSFPFSWA-SGDFVEYCSRLAVTGVSFALFIGLPV 116

Query: 358 AWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDG 537
           AWFG V P+S+PLK  +GA+SSG+FVVTLAV+RMYLGWAYVGNRLLSATVEYEETGWYDG
Sbjct: 117 AWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDG 176

Query: 538 QVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLAVCIFLLVNIEGSQKVSYFSS 717
           Q+W+K+A+VLARDRLLGS+SVKPVLSRLK TLV LA SL VC FLL+NIEGSQ+     S
Sbjct: 177 QIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLVTLAASLFVCAFLLINIEGSQRNLNIVS 236

Query: 718 QEPGGRSVVGVYKDDSARLFEPDDFCGEPSL 810
              GGR++ GVY DDSAR FEPD FCGEP L
Sbjct: 237 NGGGGRAIPGVYNDDSARSFEPDAFCGEPDL 267


>ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|222854540|gb|EEE92087.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  320 bits (820), Expect = 3e-85
 Identities = 163/251 (64%), Positives = 191/251 (76%), Gaps = 10/251 (3%)
 Frame = +1

Query: 85  IFLHNPISINKQTTLPNLQHKH----TIILSSKSSSFR------PPEAECPVPFDQQPIN 234
           + L +P  ++  T    + H H      +    SSSFR      PPE ECPVP DQQPIN
Sbjct: 6   LHLSSPFLLSSLTQKRFIYHHHHNYKNTLPKIPSSSFRNGSSNTPPETECPVPLDQQPIN 65

Query: 235 EYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGA 414
           EYQ+LS+SFPFSWA + D+VEY  RL  TGASFA  I LPVAWFG V P+++PLK  + A
Sbjct: 66  EYQNLSTSFPFSWA-SGDIVEYCSRLFVTGASFALLIALPVAWFGTVAPKTEPLKPVLAA 124

Query: 415 LSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSY 594
           LSSG+FVV+LAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+
Sbjct: 125 LSSGVFVVSLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSF 184

Query: 595 SVKPVLSRLKLTLVGLATSLAVCIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARL 774
           SVKPVLSRLK TLV LA SL VC+ L +NIEG QK SY   +E GGR++ GVY DDSAR 
Sbjct: 185 SVKPVLSRLKYTLVTLAASLFVCVVLFINIEGGQKGSYTPFEEAGGRAIPGVYNDDSARS 244

Query: 775 FEPDDFCGEPS 807
           FEPD FCGEP+
Sbjct: 245 FEPDAFCGEPA 255


>ref|XP_002516448.1| conserved hypothetical protein [Ricinus communis]
           gi|223544268|gb|EEF45789.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  305 bits (782), Expect = 8e-81
 Identities = 154/231 (66%), Positives = 179/231 (77%), Gaps = 5/231 (2%)
 Frame = +1

Query: 133 NLQHKHTIILSSKSSSFR-----PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVE 297
           N +H   +I     SSFR     P E ECPVP +QQPINEYQSLS+SFPFSW  ++ +VE
Sbjct: 37  NQRHCRNLIPKLPLSSFRNGSNTPSETECPVPLEQQPINEYQSLSTSFPFSWPASN-IVE 95

Query: 298 YSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAY 477
           Y  RL  TGASFA FIGLPVAWFG V PES+P K  I A SSG+ +V+LAV+RMYLGWAY
Sbjct: 96  YCSRLFVTGASFALFIGLPVAWFGSVRPESEPFKPIIAAASSGILLVSLAVVRMYLGWAY 155

Query: 478 VGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLA 657
           VGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+SVKPVLSRLK TL+ LAT L 
Sbjct: 156 VGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLLTLATLLL 215

Query: 658 VCIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARLFEPDDFCGEPSL 810
            C+ L +NIEG+QK  Y +S+    R++ GVY DDSAR FEPD FCGEP L
Sbjct: 216 GCVVLFINIEGAQKGVYVTSEATRDRTIPGVYNDDSARSFEPDAFCGEPDL 266


>ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago truncatula]
           gi|355478061|gb|AES59264.1| hypothetical protein
           MTR_1g016360 [Medicago truncatula]
          Length = 252

 Score =  296 bits (758), Expect = 5e-78
 Identities = 158/262 (60%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
 Frame = +1

Query: 40  MATLSI-LSPK---PPLKTIFLHNPISINKQTTLPNLQHKHTIILSSKSSSFRPPEAECP 207
           MAT+SI +SPK   P  KT+F   PI  NK  T+ N  ++  + L   SS       ECP
Sbjct: 1   MATISIRMSPKLFSPSTKTLF---PIHTNKSITITNNSNRTKLSLLYLSSR---NGTECP 54

Query: 208 VPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPES 387
           VP +QQPINEYQSLS+SFPFSWA   D+VEY  RL   G SFA  +GLPVAWFG V  + 
Sbjct: 55  VPLEQQPINEYQSLSTSFPFSWAA-GDVVEYGSRLFVVGFSFALLVGLPVAWFGTVGAQY 113

Query: 388 QPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVL 567
           +P K  + A SSG+  VT AV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VL
Sbjct: 114 EPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 173

Query: 568 ARDRLLGSYSVKPVLSRLKLTLVGLATSLAVCIFLLVNIEGSQKVSYFSSQEPGGRSVVG 747
           ARDRLLGS+SVKPVLSRLK+TLVGLA  L  C  + +NI+     SY +S+E G R++ G
Sbjct: 174 ARDRLLGSFSVKPVLSRLKITLVGLAACLVTCALIFINID----ESYLTSRETGVRAIPG 229

Query: 748 VYKDDSARLFEPDDFCGEPSLQ 813
            Y D+SAR FEPD FCGEP LQ
Sbjct: 230 AYNDESARSFEPDAFCGEPDLQ 251


>ref|XP_003544530.1| PREDICTED: uncharacterized protein ycf36-like [Glycine max]
          Length = 257

 Score =  293 bits (750), Expect = 4e-77
 Identities = 154/245 (62%), Positives = 183/245 (74%), Gaps = 6/245 (2%)
 Frame = +1

Query: 97  NPISINKQTTLPNLQHKHTIILSSKSS------SFRPPEAECPVPFDQQPINEYQSLSSS 258
           NP  ++  +T+P        ++ S+SS      SF  PE ECPVP +QQPINEYQSLS+S
Sbjct: 23  NPRFLSASSTIP------LFLVPSRSSYLLLSFSFSRPETECPVPHEQQPINEYQSLSTS 76

Query: 259 FPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVV 438
           FPFSWA   D+VEY+ RL  TGASFA  +GLPVAWFG    +++P K  + A SSGLF V
Sbjct: 77  FPFSWAA-GDVVEYASRLFVTGASFALLLGLPVAWFGSAGAQAEPAKRLLCAASSGLFAV 135

Query: 439 TLAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSR 618
           TLAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+ VKPVL R
Sbjct: 136 TLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSFFVKPVLGR 195

Query: 619 LKLTLVGLATSLAVCIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARLFEPDDFCG 798
           LK+TLV LATSL VC  +L+NI+G Q +   +S+EP  R V GVY DDSARLFEPD F  
Sbjct: 196 LKITLVSLATSLLVCALILINIDGDQNL---TSKEPRVRVVPGVYNDDSARLFEPDAFRD 252

Query: 799 EPSLQ 813
           E  LQ
Sbjct: 253 ELDLQ 257