BLASTX nr result

ID: Coptis23_contig00010065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010065
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518497.1| Protein sufB, putative [Ricinus communis] gi...   587   e-165
dbj|BAJ34164.1| unnamed protein product [Thellungiella halophila]     580   e-163
ref|XP_004145110.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   580   e-163
ref|XP_002305582.1| predicted protein [Populus trichocarpa] gi|2...   580   e-163
ref|XP_002272917.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   577   e-162

>ref|XP_002518497.1| Protein sufB, putative [Ricinus communis] gi|223542342|gb|EEF43884.1|
            Protein sufB, putative [Ricinus communis]
          Length = 553

 Score =  587 bits (1514), Expect = e-165
 Identities = 284/322 (88%), Positives = 303/322 (94%)
 Frame = -3

Query: 1269 EYPELVRKYLGKVVPCEDNYYAALNSAVFSDGSFCYIPKDTECPMPISTYFRINAMETGQ 1090
            EYP+LVRKYLG+VVP EDNYYAALNSAVFSDGSFCYIPKDT+CPM ISTYFRINAMETGQ
Sbjct: 232  EYPDLVRKYLGRVVPSEDNYYAALNSAVFSDGSFCYIPKDTKCPMQISTYFRINAMETGQ 291

Query: 1089 FERTLIVAEAGSKVQYLEGCTAPSYDKNQLHAAVVELYTAEDAQIEYSTVQNWYAGDEEG 910
            FERTLIVA+  S V+YLEGCTAPSYD NQLHAAVVELY AE A+I+YSTVQNWYAGDEEG
Sbjct: 292  FERTLIVADDRSFVEYLEGCTAPSYDTNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEG 351

Query: 909  RGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVILEGDDTVGEFYSVALTNNYQ 730
            RGGIYNFVTKRGLC+GDRSKISWTQVETGSAITWKYPSV+LEGDDTVGEFYSVALTNNYQ
Sbjct: 352  RGGIYNFVTKRGLCSGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 411

Query: 729  QADTGTKMIHKGNNTKSTIISKGISAGKSTNCYRGLVQVQSKAENARNISQCDSMLIGDT 550
            QADTGTKMIHKG NT+S IISKGISAG S NCYRGLVQ+QSKAENARN+SQCDSMLIGDT
Sbjct: 412  QADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQIQSKAENARNLSQCDSMLIGDT 471

Query: 549  AAANTYPYIQAKNSTARIEHEASTSKIGEDQLFYFQQRGIDHDKAVKTMISGFCQDVFNK 370
            AAANTYPYIQ KN TAR+EHEASTSKIGEDQLFYFQQRGID++KA+  MISGFCQDVFN+
Sbjct: 472  AAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCQDVFNE 531

Query: 369  LPAEFSVEVNELMSIKLEGSVG 304
            LP EF  EVN+LMS+KLEGSVG
Sbjct: 532  LPDEFGAEVNQLMSLKLEGSVG 553


>dbj|BAJ34164.1| unnamed protein product [Thellungiella halophila]
          Length = 566

 Score =  580 bits (1496), Expect = e-163
 Identities = 279/322 (86%), Positives = 300/322 (93%)
 Frame = -3

Query: 1269 EYPELVRKYLGKVVPCEDNYYAALNSAVFSDGSFCYIPKDTECPMPISTYFRINAMETGQ 1090
            EYP+L++KYLG+VVP +DNYYAALNSAVFSDGSFCYIPK+T CPMPISTYFRINAMETGQ
Sbjct: 245  EYPDLIKKYLGRVVPSDDNYYAALNSAVFSDGSFCYIPKNTRCPMPISTYFRINAMETGQ 304

Query: 1089 FERTLIVAEAGSKVQYLEGCTAPSYDKNQLHAAVVELYTAEDAQIEYSTVQNWYAGDEEG 910
            FERTLIVAE GS V+YLEGCTAPSYD NQLHAAVVELY  E A+I+YSTVQNWYAGDEEG
Sbjct: 305  FERTLIVAEEGSFVEYLEGCTAPSYDTNQLHAAVVELYCGEGAEIKYSTVQNWYAGDEEG 364

Query: 909  RGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVILEGDDTVGEFYSVALTNNYQ 730
            +GGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSV+LEGDD+VGEFYSVALTNNYQ
Sbjct: 365  KGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDSVGEFYSVALTNNYQ 424

Query: 729  QADTGTKMIHKGNNTKSTIISKGISAGKSTNCYRGLVQVQSKAENARNISQCDSMLIGDT 550
            QADTGTKMIHKG NTKS IISKGISAG S NCYRGLVQVQSKAENA+N S CDSMLIGD 
Sbjct: 425  QADTGTKMIHKGKNTKSRIISKGISAGHSRNCYRGLVQVQSKAENAKNTSTCDSMLIGDK 484

Query: 549  AAANTYPYIQAKNSTARIEHEASTSKIGEDQLFYFQQRGIDHDKAVKTMISGFCQDVFNK 370
            AAANTYPYIQ KN +A++EHEASTSKIGEDQLFYFQQRGIDH++A+  MISGFC+DVFNK
Sbjct: 485  AAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNK 544

Query: 369  LPAEFSVEVNELMSIKLEGSVG 304
            LP EF  EVN+LMSIKLEGSVG
Sbjct: 545  LPDEFGAEVNQLMSIKLEGSVG 566


>ref|XP_004145110.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic-like [Cucumis
            sativus] gi|449488362|ref|XP_004158013.1| PREDICTED:
            UPF0051 protein ABCI8, chloroplastic-like [Cucumis
            sativus]
          Length = 554

 Score =  580 bits (1495), Expect = e-163
 Identities = 280/322 (86%), Positives = 302/322 (93%)
 Frame = -3

Query: 1269 EYPELVRKYLGKVVPCEDNYYAALNSAVFSDGSFCYIPKDTECPMPISTYFRINAMETGQ 1090
            EYP+LVRKYLG+VVP EDN+YAALNSAVFSDGSFCYIPKDT+CPM ISTYFRINA+ETGQ
Sbjct: 233  EYPDLVRKYLGRVVPSEDNFYAALNSAVFSDGSFCYIPKDTKCPMQISTYFRINALETGQ 292

Query: 1089 FERTLIVAEAGSKVQYLEGCTAPSYDKNQLHAAVVELYTAEDAQIEYSTVQNWYAGDEEG 910
            FERTLIVA+  S V+YLEGCTAPSYD+NQLHAAVVELY AE AQI+YSTVQNWYAGDEEG
Sbjct: 293  FERTLIVADDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAQIKYSTVQNWYAGDEEG 352

Query: 909  RGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVILEGDDTVGEFYSVALTNNYQ 730
            +GG+YNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSV+LEGDDTVGEFYSVALTNNYQ
Sbjct: 353  KGGVYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 412

Query: 729  QADTGTKMIHKGNNTKSTIISKGISAGKSTNCYRGLVQVQSKAENARNISQCDSMLIGDT 550
            QADTGTKMIHKG NT+S IISKGISAG S NCYRGLVQVQSKA+NA+N SQCDSMLIGD 
Sbjct: 413  QADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKADNAKNSSQCDSMLIGDN 472

Query: 549  AAANTYPYIQAKNSTARIEHEASTSKIGEDQLFYFQQRGIDHDKAVKTMISGFCQDVFNK 370
            AAANTYPYIQ KN TARIEHEASTSKIGEDQLFYFQQRGID++KA+  MISGFC+DVFN+
Sbjct: 473  AAANTYPYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNE 532

Query: 369  LPAEFSVEVNELMSIKLEGSVG 304
            LP EF  EVN+LMS+KLEGSVG
Sbjct: 533  LPDEFGAEVNQLMSLKLEGSVG 554


>ref|XP_002305582.1| predicted protein [Populus trichocarpa] gi|222848546|gb|EEE86093.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  580 bits (1495), Expect = e-163
 Identities = 280/322 (86%), Positives = 302/322 (93%)
 Frame = -3

Query: 1269 EYPELVRKYLGKVVPCEDNYYAALNSAVFSDGSFCYIPKDTECPMPISTYFRINAMETGQ 1090
            +YP+LVRKYLG+VVP EDNYYAALNSAVFSDGSFCY+PKDT+CPM ISTYFRINAMETGQ
Sbjct: 233  KYPDLVRKYLGRVVPSEDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINAMETGQ 292

Query: 1089 FERTLIVAEAGSKVQYLEGCTAPSYDKNQLHAAVVELYTAEDAQIEYSTVQNWYAGDEEG 910
            FERTLIVA+  S V+YLEGCTAPSYDKNQLHAAVVELY AE A+I+YSTVQNWYAGDE+G
Sbjct: 293  FERTLIVADDRSFVEYLEGCTAPSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEQG 352

Query: 909  RGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVILEGDDTVGEFYSVALTNNYQ 730
            +GGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSV+LEGDDTVGEFYSVALTNNYQ
Sbjct: 353  KGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 412

Query: 729  QADTGTKMIHKGNNTKSTIISKGISAGKSTNCYRGLVQVQSKAENARNISQCDSMLIGDT 550
            QADTGTKMIHKG NT+S IISKGIS G S NCYRGLVQVQSKA+NARN SQCDSMLIGDT
Sbjct: 413  QADTGTKMIHKGKNTRSRIISKGISVGHSRNCYRGLVQVQSKADNARNSSQCDSMLIGDT 472

Query: 549  AAANTYPYIQAKNSTARIEHEASTSKIGEDQLFYFQQRGIDHDKAVKTMISGFCQDVFNK 370
            AAANTYPYIQ KN TAR+EHEASTSKIGEDQLFYFQQRGID++KA+  MISGFC+DVFN+
Sbjct: 473  AAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNE 532

Query: 369  LPAEFSVEVNELMSIKLEGSVG 304
            LP EF  EVN+LMS+KLEGSVG
Sbjct: 533  LPDEFGSEVNQLMSLKLEGSVG 554


>ref|XP_002272917.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic [Vitis vinifera]
          Length = 554

 Score =  577 bits (1487), Expect = e-162
 Identities = 279/322 (86%), Positives = 301/322 (93%)
 Frame = -3

Query: 1269 EYPELVRKYLGKVVPCEDNYYAALNSAVFSDGSFCYIPKDTECPMPISTYFRINAMETGQ 1090
            EYP+LVRKYLG+VVP +DNYYAALNSAVFSDGSFCY+PKDT+CPM ISTYFRINA+ETGQ
Sbjct: 233  EYPDLVRKYLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQ 292

Query: 1089 FERTLIVAEAGSKVQYLEGCTAPSYDKNQLHAAVVELYTAEDAQIEYSTVQNWYAGDEEG 910
            FERTLIVA+  S V+YLEGCTAPSYD+NQLHAAVVELY AE A+I+YSTVQNWYAGDEEG
Sbjct: 293  FERTLIVADDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEG 352

Query: 909  RGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVILEGDDTVGEFYSVALTNNYQ 730
            RGGIYNFVTKRGLC+G RSKISWTQVETGSAITWKYPSV+LEGDDTVGEFYSVALTNNYQ
Sbjct: 353  RGGIYNFVTKRGLCSGARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 412

Query: 729  QADTGTKMIHKGNNTKSTIISKGISAGKSTNCYRGLVQVQSKAENARNISQCDSMLIGDT 550
            QADTGTKMIHKG NT+S IISKGISAG S NCYRGLVQVQSKA+NARN SQCDSMLIGD 
Sbjct: 413  QADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDN 472

Query: 549  AAANTYPYIQAKNSTARIEHEASTSKIGEDQLFYFQQRGIDHDKAVKTMISGFCQDVFNK 370
            AAANTYPYIQ KN TARIEHEASTSKIGEDQLFYFQQRGID++KA+  MISGFC+DVFN+
Sbjct: 473  AAANTYPYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNE 532

Query: 369  LPAEFSVEVNELMSIKLEGSVG 304
            LP EF  EVN+LMS+KLEGSVG
Sbjct: 533  LPDEFGAEVNQLMSLKLEGSVG 554


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