BLASTX nr result

ID: Coptis23_contig00010060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010060
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein ...   101   6e-20
ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm...    82   4e-14
ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domai...    82   6e-14
ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein ...    82   6e-14
ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein ...    81   1e-13

>ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|296087792|emb|CBI35048.3| unnamed protein
           product [Vitis vinifera]
          Length = 504

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/82 (56%), Positives = 58/82 (70%)
 Frame = +1

Query: 7   PRTRLQIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLHSVDSKQX 186
           PRTRLQ+WFIR+CSSIL+WTCLVQ V VGELW+P+LLTG+S   +RIT + LH   +   
Sbjct: 22  PRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPRLLTGISSHLSRITPYPLHVEKAILS 81

Query: 187 XXXXXXXXXXYNSSGYLKVSCN 252
                     Y S+G+L+VSCN
Sbjct: 82  PPPRPLPARSYQSNGFLRVSCN 103


>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
           gi|223538365|gb|EEF39972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
 Frame = +1

Query: 10  RTRLQIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLH--SVDSKQ 183
           RTRLQ+WFIR+CSSIL+WT LVQ V VGELW P  ++  +++ ++IT F LH        
Sbjct: 23  RTRLQVWFIRVCSSILLWTGLVQLVAVGELWRPNFISTFTHKISQITPFPLHLQLQPPPP 82

Query: 184 XXXXXXXXXXXYNSSGYLKVSCN 252
                      Y S+G+LKVSCN
Sbjct: 83  PPPPPLLPARNYTSNGFLKVSCN 105


>ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domain-containing protein
           At1g04910-like [Cucumis sativus]
          Length = 503

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = +1

Query: 7   PRTRLQIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLHSVDSKQX 186
           PRTRLQ+WF+R+CSSIL+WT LVQ V  G+LW+P  ++ ++ + +++T   L     +  
Sbjct: 21  PRTRLQVWFVRVCSSILLWTFLVQLVAFGKLWHPPFISNITNRISQVTGIPLSLHVEQSI 80

Query: 187 XXXXXXXXXXYNSSGYLKVSCN 252
                     Y+S+GYL+VSCN
Sbjct: 81  QSTPLLPTRNYSSNGYLRVSCN 102


>ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 503

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = +1

Query: 7   PRTRLQIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLHSVDSKQX 186
           PRTRLQ+WF+R+CSSIL+WT LVQ V  G+LW+P  ++ ++ + +++T   L     +  
Sbjct: 21  PRTRLQVWFVRVCSSILLWTFLVQLVAFGKLWHPPFISNITNRISQVTGIPLSLHVEQSI 80

Query: 187 XXXXXXXXXXYNSSGYLKVSCN 252
                     Y+S+GYL+VSCN
Sbjct: 81  QSTPLLPTRNYSSNGYLRVSCN 102


>ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 506

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +1

Query: 7   PRTRLQIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSL--HSVDSK 180
           PRTRL+IWFIR+CSSI++WTCLVQ VTV ELW+  L++G++     IT   L     +  
Sbjct: 21  PRTRLRIWFIRVCSSIVVWTCLVQLVTVSELWHSHLISGITNGIYHITQVQLPIQEDNGV 80

Query: 181 QXXXXXXXXXXXYNSSGYLKVSCN 252
                       Y S+G+L+VSCN
Sbjct: 81  AQSPPVFLPPRNYTSNGFLRVSCN 104


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