BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010059
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   314   3e-83
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   310   7e-82
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   308   2e-81
ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|2...   307   4e-81
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   306   6e-81

>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  314 bits (805), Expect = 3e-83
 Identities = 167/289 (57%), Positives = 185/289 (64%), Gaps = 6/289 (2%)
 Frame = +1

Query: 283  MARHLASSYGSEVDRVNCPFFIKVGXXXXXXXXXXXXXXXXXXXACRHGDGCARFHNHPT 462
            MA HLAS +G+E DRVNCPF+ K+G                   ACRHGD C+R HN PT
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIG-------------------ACRHGDRCSRLHNRPT 41

Query: 463  SSPTLLLSNMYQRLDMINPGVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVC 642
             SPTLLLSNMYQR DMI PGVD  GQPID RK+QEHFE+FYEDIFEEL KFG+IE LNVC
Sbjct: 42   ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVC 101

Query: 643  DNLNDHMVGNVYVQFKDEDQAAAALHALQGRFYSGRPIIVSFSTVTNFRDATCRQFXXXX 822
            DNL DHM+GNVYVQF++EDQAAAAL ALQGRFYSGRPII  FS VT+FR+ATCRQF    
Sbjct: 102  DNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 823  XXXXXXXXFMHVKEIGRDLRRKLFGXXXXXXXXXXXXXPYGRGRHSERRXXXXXXXXXXX 1002
                    FMHVK IGRDLRRKLFG                  RH   +           
Sbjct: 162  CNRGGYCNFMHVKLIGRDLRRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRD 221

Query: 1003 XXXXXXXEKRKPR-SLRHNGS-----SPVREGSEERRARIEQWNREKDE 1131
                    +   R   R +GS     SPVREGSEERRARIEQWNRE++E
Sbjct: 222  RDYRGNGRRSGDRHDRRRHGSPRRSRSPVREGSEERRARIEQWNREREE 270


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  310 bits (793), Expect = 7e-82
 Identities = 167/290 (57%), Positives = 185/290 (63%), Gaps = 7/290 (2%)
 Frame = +1

Query: 283  MARHLASSYGSEVDRVNCPFFIKVGXXXXXXXXXXXXXXXXXXXACRHGDGCARFHNHPT 462
            MA HLAS +G+E DRVNCPF+ K+G                   ACRHGD C+R HN PT
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIG-------------------ACRHGDRCSRLHNRPT 41

Query: 463  SSPTLLLSNMYQRLDMINPGVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVC 642
             SPTLLLSNMYQR DMI PGVD  GQP+D  K+QEHFEEFYEDIFEEL+KFG+IE LNVC
Sbjct: 42   ISPTLLLSNMYQRPDMITPGVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVC 101

Query: 643  DNLNDHMVGNVYVQFKDEDQAAAALHALQGRFYSGRPIIVSFSTVTNFRDATCRQFXXXX 822
            DNL DHM+GNVYV FK+EDQAAAAL ALQGRFYSGRPII  FS VT+FR+ATCRQF    
Sbjct: 102  DNLADHMIGNVYVLFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 823  XXXXXXXXFMHVKEIGRDLRRKLFG---XXXXXXXXXXXXXPYGRGRHSERRXXXXXXXX 993
                    FMHVK IGRDLRRKLFG                P  R R  +RR        
Sbjct: 162  CNRGGYCNFMHVKLIGRDLRRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRD 221

Query: 994  XXXXXXXXXXEKRKPRSLRHNG----SSPVREGSEERRARIEQWNREKDE 1131
                       +R  +  R  G     S VREGSEERRARIEQWNRE++E
Sbjct: 222  RDRDRDYRGNGRRNDKYDREGGRKRHGSTVREGSEERRARIEQWNREREE 271


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  308 bits (789), Expect = 2e-81
 Identities = 169/299 (56%), Positives = 186/299 (62%), Gaps = 16/299 (5%)
 Frame = +1

Query: 283  MARHLASSYGSEVDRVNCPFFIKVGXXXXXXXXXXXXXXXXXXXACRHGDGCARFHNHPT 462
            MA HLAS +G+E DRVNCPF+ K+G                   ACRHGD C+R HN PT
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIG-------------------ACRHGDRCSRLHNRPT 41

Query: 463  SSPTLLLSNMYQRLDMINPGVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVC 642
             SPTLLLSNMYQR DMI PGVD  GQPID RK+QEHFE+FYEDIFEEL KFG+IE LNVC
Sbjct: 42   ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVC 101

Query: 643  DNLNDHMVGNVYVQFKDEDQAAAALHALQGRFYSGRPIIVSFSTVTNFRDATCRQFXXXX 822
            DNL DHM+GNVYVQFK+E+QAAAAL ALQGRFYSGRPII  FS VT+FR+ATCRQF    
Sbjct: 102  DNLADHMIGNVYVQFKEEEQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 823  XXXXXXXXFMHVKEIGRDLRRKLFGXXXXXXXXXXXXXPYGRGRHSERRXXXXXXXXXXX 1002
                    FMHVK IGRDLRRKLFG              YGR R   R            
Sbjct: 162  CNRGGYCNFMHVKLIGRDLRRKLFGRYSG----------YGRSRSRSRSLSPRYRRDSDR 211

Query: 1003 XXXXXXXEKR-----------KPRSLRHNGS-----SPVREGSEERRARIEQWNREKDE 1131
                   + R                R +GS     SPVREGSEERRARIE WNRE++E
Sbjct: 212  RRSGDRGDYRGNGRRSGDKHGSDGGRRRHGSPRRSRSPVREGSEERRARIELWNREREE 270


>ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|222857274|gb|EEE94821.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  307 bits (787), Expect = 4e-81
 Identities = 163/289 (56%), Positives = 184/289 (63%), Gaps = 6/289 (2%)
 Frame = +1

Query: 283  MARHLASSYGSEVDRVNCPFFIKVGXXXXXXXXXXXXXXXXXXXACRHGDGCARFHNHPT 462
            MA HLAS +G+E DRVNCPF+ K+G                   ACRHGD C+R HN PT
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIG-------------------ACRHGDRCSRLHNRPT 41

Query: 463  SSPTLLLSNMYQRLDMINPGVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVC 642
             SPTLLLSN Y R DMI PGVD  GQP+D  K+QEHFE+FYEDIFEELSKFG+IE LNVC
Sbjct: 42   ISPTLLLSNTYHRPDMITPGVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVC 101

Query: 643  DNLNDHMVGNVYVQFKDEDQAAAALHALQGRFYSGRPIIVSFSTVTNFRDATCRQFXXXX 822
            DNL DHM+GNVYVQFK+EDQAAAAL +LQGRFYSGRPII  FS VT+FR+ATCRQ+    
Sbjct: 102  DNLADHMIGNVYVQFKEEDQAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENN 161

Query: 823  XXXXXXXXFMHVKEIGRDLRRKLFG---XXXXXXXXXXXXXPYGRGRHSERRXXXXXXXX 993
                    FMHVK IG+DLRRKLFG                P  R R  +RR        
Sbjct: 162  CNRGGYCNFMHVKLIGKDLRRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRD 221

Query: 994  XXXXXXXXXXEK---RKPRSLRHNGSSPVREGSEERRARIEQWNREKDE 1131
                      ++   RK         SPVREGSEERRARIEQWNRE++E
Sbjct: 222  RDYRGNGRRNDRDGGRKRHGSPRRSRSPVREGSEERRARIEQWNREREE 270


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
            sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
            splicing factor U2af small subunit B-like [Cucumis
            sativus]
          Length = 276

 Score =  306 bits (785), Expect = 6e-81
 Identities = 163/293 (55%), Positives = 183/293 (62%), Gaps = 10/293 (3%)
 Frame = +1

Query: 283  MARHLASSYGSEVDRVNCPFFIKVGXXXXXXXXXXXXXXXXXXXACRHGDGCARFHNHPT 462
            MA HLAS +G+E DRVNCPF+ K+G                   ACRHGD C+R HN PT
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIG-------------------ACRHGDRCSRLHNRPT 41

Query: 463  SSPTLLLSNMYQRLDMINPGVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVC 642
             SPTLLLSNMYQR DMI PGVD  GQPID RK+QEHFE+FYEDI+EEL KFG+IE LNVC
Sbjct: 42   ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVC 101

Query: 643  DNLNDHMVGNVYVQFKDEDQAAAALHALQGRFYSGRPIIVSFSTVTNFRDATCRQFXXXX 822
            DNL DHM+GNVYVQF++EDQAAAAL ALQGRFYSGRPII  FS VT+FR+ATCRQ+    
Sbjct: 102  DNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENN 161

Query: 823  XXXXXXXXFMHVKEIGRDLRRKLFG---XXXXXXXXXXXXXPYGRGRHSERRXXXXXXXX 993
                    FMHVK IG+DLRRKLFG                P  R  H  R         
Sbjct: 162  CNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDY 221

Query: 994  XXXXXXXXXXEK-------RKPRSLRHNGSSPVREGSEERRARIEQWNREKDE 1131
                      ++         PR  R      VREGSEERRARIEQWNRE++E
Sbjct: 222  RGNGRSKERHDRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREE 274