BLASTX nr result
ID: Coptis23_contig00010044
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010044 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] 140 1e-31 ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co... 133 1e-29 emb|CBI21155.3| unnamed protein product [Vitis vinifera] 131 7e-29 ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2... 127 7e-28 ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-27 >emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] Length = 1384 Score = 140 bits (353), Expect = 1e-31 Identities = 74/125 (59%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Frame = +3 Query: 102 SGWKRNGVDAKGLQGKSSASLAPTLPIPQPELKAFTSKGKSDPVLPVSKWAREDDGSDEE 281 SGW R G D QGK S LAPT+PIPQPELKAFT+KGK+DPVLP SKWAREDD SD+E Sbjct: 875 SGWNRYGEDEIQSQGKGSVPLAPTIPIPQPELKAFTNKGKTDPVLPASKWAREDDDSDDE 934 Query: 282 NKRXXXXXXXXXXXXXXXXXXXXPNKGDDVEVTTEVGTLSQPDSG-MNEEQRQKLRRLEV 458 KR P K D++E TE SQPDSG MNEE RQKLRRLEV Sbjct: 935 QKRSARGLGLSYSSSGSENAGDGPXKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEV 994 Query: 459 AVMEY 473 A++EY Sbjct: 995 ALIEY 999 >ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like [Cucumis sativus] gi|449493301|ref|XP_004159248.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like [Cucumis sativus] Length = 961 Score = 133 bits (335), Expect = 1e-29 Identities = 68/128 (53%), Positives = 79/128 (61%) Frame = +3 Query: 90 PLMSSGWKRNGVDAKGLQGKSSASLAPTLPIPQPELKAFTSKGKSDPVLPVSKWAREDDG 269 P +SGW R G D Q S LA TL IPQPELK F GK+DPVLP SKWAREDD Sbjct: 708 PAETSGWSRFGDDEADFQRMGSVPLAQTLSIPQPELKGFIKSGKNDPVLPASKWAREDDE 767 Query: 270 SDEENKRXXXXXXXXXXXXXXXXXXXXPNKGDDVEVTTEVGTLSQPDSGMNEEQRQKLRR 449 SD E K P+K D++E+TTE+ L QPDSG+NEEQRQKLRR Sbjct: 768 SDSEQKGGTRGLGLSYSSSGSENAGDGPSKADEMEITTELSALMQPDSGLNEEQRQKLRR 827 Query: 450 LEVAVMEY 473 +EVA++EY Sbjct: 828 VEVALIEY 835 >emb|CBI21155.3| unnamed protein product [Vitis vinifera] Length = 941 Score = 131 bits (329), Expect = 7e-29 Identities = 68/112 (60%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Frame = +3 Query: 141 QGKSSASLAPTLPIPQPELKAFTSKGKSDPVLPVSKWAREDDGSDEENKRXXXXXXXXXX 320 QGK S LAPT+PIPQPELKAFT+KGK+DPVLP SKWAREDD SD+E KR Sbjct: 705 QGKGSVPLAPTIPIPQPELKAFTNKGKTDPVLPASKWAREDDDSDDEQKRSARGLGLSYS 764 Query: 321 XXXXXXXXXXPNKGDDVEVTTEVGTLSQPDSG-MNEEQRQKLRRLEVAVMEY 473 P+K D++E TE SQPDSG MNEE RQKLRRLEVA++EY Sbjct: 765 SSGSENAGDGPSKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEY 816 >ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1| predicted protein [Populus trichocarpa] Length = 988 Score = 127 bits (320), Expect = 7e-28 Identities = 68/136 (50%), Positives = 81/136 (59%) Frame = +3 Query: 66 RDANHGIEPLMSSGWKRNGVDAKGLQGKSSASLAPTLPIPQPELKAFTSKGKSDPVLPVS 245 R+ N P+ +GW G D Q K S SL TLPIPQPELKAF K K+DPVLP S Sbjct: 713 REVNVDPGPVGLTGWNIYGEDDTPSQNKRSVSLVSTLPIPQPELKAFAKKEKNDPVLPAS 772 Query: 246 KWAREDDGSDEENKRXXXXXXXXXXXXXXXXXXXXPNKGDDVEVTTEVGTLSQPDSGMNE 425 KWAR+DD SD+E KR K D++E T+ +QP+SGMNE Sbjct: 773 KWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPTQPESGMNE 832 Query: 426 EQRQKLRRLEVAVMEY 473 EQRQKLRRLEVA++EY Sbjct: 833 EQRQKLRRLEVALIEY 848 >ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1| predicted protein [Populus trichocarpa] Length = 955 Score = 125 bits (315), Expect = 3e-27 Identities = 67/134 (50%), Positives = 80/134 (59%) Frame = +3 Query: 72 ANHGIEPLMSSGWKRNGVDAKGLQGKSSASLAPTLPIPQPELKAFTSKGKSDPVLPVSKW 251 A +P+ S+GW G D Q K S S+A TL I QPELKAF K K+DPVLP SKW Sbjct: 689 AQSNSKPVGSTGWNVYGEDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKW 748 Query: 252 AREDDGSDEENKRXXXXXXXXXXXXXXXXXXXXPNKGDDVEVTTEVGTLSQPDSGMNEEQ 431 AR+DD SD+E KR K D++E T+ +QPDSGMNEEQ Sbjct: 749 ARDDDESDDEQKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQ 808 Query: 432 RQKLRRLEVAVMEY 473 RQKLRRLEVA++EY Sbjct: 809 RQKLRRLEVALIEY 822