BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010040
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat...   130   4e-28
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...   130   5e-28
ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|2...   120   5e-25
ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat...   115   2e-23
ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat...   115   2e-23

>ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g53330-like [Glycine max]
          Length = 465

 Score =  130 bits (328), Expect = 4e-28
 Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            GK +EA DLF DMPR  CVPDVVTYRT+FDGLC   +F+EA  +L+EM+FKG+VPC  S+
Sbjct: 346  GKWREADDLFRDMPRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSL 405

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVIDLDIWRTVIIYICTRAEKLSSC-ELVDALII 650
            N FV  LC+EG  +LLG VL+ L      + ++W+TV+  +C ++EKLS   EL+DAL++
Sbjct: 406  NEFVGRLCQEGDFELLGKVLSGLGGGFFCNENVWKTVVSLVC-KSEKLSGAFELLDALVL 464


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  130 bits (327), Expect = 5e-28
 Identities = 64/118 (54%), Positives = 80/118 (67%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            GK +EA DLFEDMPR GC PDV +YR LFDGLC+  +F+EA FILDEM+FKG+ P   S 
Sbjct: 338  GKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASK 397

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVIDLDIWRTVIIYICTRAEKLSSCELVDALI 653
              FV  LC+EG ++LL  VLNSL K NVID D W   +  +C + +  +  ELVD  +
Sbjct: 398  TKFVEALCQEGNLELLCKVLNSLVKGNVIDGDAWSLAVSKVCKKEKLSNGSELVDIFL 455



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            G+  E   + E+M  NGC PD VTY  +  G C+E +F+ A  +L+EM+ KG  P V S 
Sbjct: 268  GRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISY 327

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVI-DLDIWRTVIIYICTRAEKLSSCELVDALI 653
            N  + GLC+EG+ +    +   + +R    D+  +R +   +C   +   +  ++D ++
Sbjct: 328  NVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMV 386


>ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|222860516|gb|EEE98063.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  120 bits (301), Expect = 5e-25
 Identities = 61/118 (51%), Positives = 76/118 (64%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            GK  EA DLFEDMPR GC PDVV+YR LFDG C+  +F EA FILDEM+FKG VPC  S+
Sbjct: 340  GKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASI 399

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVIDLDIWRTVIIYICTRAEKLSSCELVDALI 653
              FV  LC      LL S  N+L K  ++++D+WR  +  +    +  SS  LVD+LI
Sbjct: 400  CKFVNRLCEGKNEDLLRSAFNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSLI 457



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            G+ +EA+ ++EDM   G  PD VTY  + +  C + +F+ A  +LDEM+ KG  P V S 
Sbjct: 270  GRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISY 329

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVI-DLDIWRTVIIYICTRAEKLSSCELVDALI 653
            N  +  L  EG+      +   + +R    D+  +R +    C   +   +  ++D +I
Sbjct: 330  NVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMI 388


>ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g53330-like [Cucumis sativus]
          Length = 394

 Score =  115 bits (287), Expect = 2e-23
 Identities = 59/119 (49%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            GK+ +A+DL EDMPR GC PDV++YR +FDGLC+  +  EA  ILDEM+FKG+VP   S+
Sbjct: 277  GKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESI 336

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVIDLDIWRTVIIYICTRAEKLS-SCELVDALI 653
            N  V  LC+E  M+LL  +LNSL + N +++D+W  V+ ++    E LS S  L+D+LI
Sbjct: 337  NKLVDRLCQECNMELLWMILNSLGRGNRMNMDMWARVVAFV--YKENLSESSNLIDSLI 393



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            G+ +E  D+  +M  NGC PD VTY  + +G C E++ + A  ++DEM+ KG  P V S 
Sbjct: 207  GRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSF 266

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNV-IDLDIWRTVIIYICTRAEKLSSCELVDALI 653
            NT +  LC+EG++     +L  + +R    D+  +R +   +C   +   +  ++D +I
Sbjct: 267  NTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMI 325


>ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g53330-like [Cucumis sativus]
          Length = 527

 Score =  115 bits (287), Expect = 2e-23
 Identities = 59/119 (49%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            GK+ +A+DL EDMPR GC PDV++YR +FDGLC+  +  EA  ILDEM+FKG+VP   S+
Sbjct: 410  GKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESI 469

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNVIDLDIWRTVIIYICTRAEKLS-SCELVDALI 653
            N  V  LC+E  M+LL  +LNSL + N +++D+W  V+ ++    E LS S  L+D+LI
Sbjct: 470  NKLVDRLCQECNMELLWMILNSLGRGNRMNMDMWARVVAFV--YKENLSESSNLIDSLI 526



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1006 GKVKEAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEDEFDEAEFILDEMLFKGHVPCVGSV 827
            G+ +E  D+  +M  NGC PD VTY  + +G C E++ + A  ++DEM+ KG  P V S 
Sbjct: 340  GRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSF 399

Query: 826  NTFVVGLCREGRMKLLGSVLNSLAKRNV-IDLDIWRTVIIYICTRAEKLSSCELVDALI 653
            NT +  LC+EG++     +L  + +R    D+  +R +   +C   +   +  ++D +I
Sbjct: 400  NTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMI 458