BLASTX nr result

ID: Coptis23_contig00010037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010037
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]     152   4e-35
ref|NP_001239848.1| uncharacterized protein LOC100804649 [Glycin...   152   4e-35
ref|XP_002873240.1| phox domain-containing protein [Arabidopsis ...   149   2e-34
ref|NP_196232.1| sorting nexin 1 [Arabidopsis thaliana] gi|75170...   149   2e-34
emb|CAD29576.1| sorting nexin 1 [Brassica oleracea]                   149   3e-34

>ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]
          Length = 405

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/74 (97%), Positives = 74/74 (100%)
 Frame = -3

Query: 224 SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYNDFVWLRDRLFDKYKGIFIP 45
           SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY+DFVWLRDRLF+KYKGIFIP
Sbjct: 31  SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIP 90

Query: 44  PLPEKSAVEKFRFS 3
           PLPEKSAVEKFRFS
Sbjct: 91  PLPEKSAVEKFRFS 104


>ref|NP_001239848.1| uncharacterized protein LOC100804649 [Glycine max]
           gi|255640209|gb|ACU20395.1| unknown [Glycine max]
          Length = 405

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/74 (97%), Positives = 74/74 (100%)
 Frame = -3

Query: 224 SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYNDFVWLRDRLFDKYKGIFIP 45
           SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY+DFVWLRDRLF+KYKGIFIP
Sbjct: 31  SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIP 90

Query: 44  PLPEKSAVEKFRFS 3
           PLPEKSAVEKFRFS
Sbjct: 91  PLPEKSAVEKFRFS 104


>ref|XP_002873240.1| phox domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319077|gb|EFH49499.1| phox domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 403

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/74 (95%), Positives = 73/74 (98%)
 Frame = -3

Query: 224 SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYNDFVWLRDRLFDKYKGIFIP 45
           SVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRY+DFVWLRDRLF+KYKGIFIP
Sbjct: 30  SVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIP 89

Query: 44  PLPEKSAVEKFRFS 3
           PLPEKSAVEKFRFS
Sbjct: 90  PLPEKSAVEKFRFS 103


>ref|NP_196232.1| sorting nexin 1 [Arabidopsis thaliana]
           gi|75170355|sp|Q9FG38.1|SNX1_ARATH RecName: Full=Sorting
           nexin 1; Short=AtSNX1; AltName: Full=Vacuolar protein
           sorting-associated protein 5 homolog
           gi|10257486|dbj|BAB10207.1| sorting nexin-like protein
           [Arabidopsis thaliana] gi|119935967|gb|ABM06047.1|
           At5g06140 [Arabidopsis thaliana]
           gi|332003592|gb|AED90975.1| sorting nexin 1 [Arabidopsis
           thaliana]
          Length = 402

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/74 (95%), Positives = 73/74 (98%)
 Frame = -3

Query: 224 SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYNDFVWLRDRLFDKYKGIFIP 45
           SVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRY+DFVWLRDRLF+KYKGIFIP
Sbjct: 29  SVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIP 88

Query: 44  PLPEKSAVEKFRFS 3
           PLPEKSAVEKFRFS
Sbjct: 89  PLPEKSAVEKFRFS 102


>emb|CAD29576.1| sorting nexin 1 [Brassica oleracea]
          Length = 401

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/74 (93%), Positives = 73/74 (98%)
 Frame = -3

Query: 224 SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYNDFVWLRDRLFDKYKGIFIP 45
           SVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRY+DFVWLRDRLF+KYKG+F+P
Sbjct: 27  SVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGVFVP 86

Query: 44  PLPEKSAVEKFRFS 3
           PLPEKSAVEKFRFS
Sbjct: 87  PLPEKSAVEKFRFS 100


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