BLASTX nr result

ID: Coptis23_contig00010026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010026
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049806.1| Os03g0292800 [Oryza sativa Japonica Group] g...    72   5e-11
ref|XP_003558150.1| PREDICTED: ran-binding protein 1 homolog c-l...    71   8e-11
gb|ADE77371.1| unknown [Picea sitchensis]                              71   8e-11
ref|XP_002465415.1| hypothetical protein SORBIDRAFT_01g038390 [S...    71   8e-11
gb|AFW82190.1| hypothetical protein ZEAMMB73_532453 [Zea mays]         71   1e-10

>ref|NP_001049806.1| Os03g0292800 [Oryza sativa Japonica Group]
           gi|108707611|gb|ABF95406.1| Ran-binding protein 1,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113548277|dbj|BAF11720.1| Os03g0292800 [Oryza sativa
           Japonica Group] gi|215697710|dbj|BAG91704.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218192599|gb|EEC75026.1| hypothetical protein
           OsI_11117 [Oryza sativa Indica Group]
           gi|222624729|gb|EEE58861.1| hypothetical protein
           OsJ_10458 [Oryza sativa Japonica Group]
          Length = 209

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 11/88 (12%)
 Frame = -1

Query: 231 DAAIQLEEQQKLLDSRV---ENAGAEVERII--------TCEEDEDVLLQMSSKLYEFEG 85
           D A   EE+++   +     E+ GA+V  I+        T EEDE+VLL M SKLY F+ 
Sbjct: 3   DPAEHREEEEEAAAAAAGEDEDTGAQVAPIVKLEEVAVTTGEEDEEVLLDMKSKLYRFDK 62

Query: 84  KGDKWKELCPGTVKLLNHKITGKVRLIM 1
           +G++WKE   GTVKLL HK TGKVRL+M
Sbjct: 63  EGNQWKERGTGTVKLLKHKETGKVRLVM 90


>ref|XP_003558150.1| PREDICTED: ran-binding protein 1 homolog c-like [Brachypodium
           distachyon]
          Length = 228

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
 Frame = -1

Query: 231 DAAIQLEEQQKLLDSRVENAGAEVERII--------TCEEDEDVLLQMSSKLYEFEGKGD 76
           D A   EE++       E+ GA++  I+        T EEDE+VLL+M +KLY F+  G 
Sbjct: 34  DPAEHREEEETAAAGEEEDTGAQIAPIVKLEEVAITTGEEDEEVLLEMKAKLYRFDKDGG 93

Query: 75  KWKELCPGTVKLLNHKITGKVRLIM 1
           +WKE   GTVKLL HK T KVRL+M
Sbjct: 94  QWKERGTGTVKLLKHKETAKVRLVM 118


>gb|ADE77371.1| unknown [Picea sitchensis]
          Length = 253

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
 Frame = -1

Query: 222 IQLEEQQKLLDSRVENAGAEVERII--------TCEEDEDVLLQMSSKLYEFEGKGDKWK 67
           +++EE+     +  E+ GA+V  I+        T EE+EDV+L M +KLY F+  G++WK
Sbjct: 17  VEVEEEAGKTVAEEEDTGAQVAPIVKLQEVSITTGEEEEDVVLDMKAKLYRFDKDGNQWK 76

Query: 66  ELCPGTVKLLNHKITGKVRLIM 1
           E   GTVKLL HK TGKVRL+M
Sbjct: 77  ERGGGTVKLLKHKETGKVRLVM 98


>ref|XP_002465415.1| hypothetical protein SORBIDRAFT_01g038390 [Sorghum bicolor]
           gi|241919269|gb|EER92413.1| hypothetical protein
           SORBIDRAFT_01g038390 [Sorghum bicolor]
          Length = 209

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
 Frame = -1

Query: 213 EEQQKLLDSRVENAGAEVERII--------TCEEDEDVLLQMSSKLYEFEGKGDKWKELC 58
           EE++       E+ GA+V  I+        T EEDEDVLL M +KLY F+  G++WKE  
Sbjct: 12  EEEEAAAAGEDEDTGAQVAPIVKLEEVAVTTGEEDEDVLLDMKAKLYRFDKDGNQWKERG 71

Query: 57  PGTVKLLNHKITGKVRLIM 1
            GTVKLL HK T KVRL+M
Sbjct: 72  TGTVKLLKHKETAKVRLVM 90


>gb|AFW82190.1| hypothetical protein ZEAMMB73_532453 [Zea mays]
          Length = 168

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
 Frame = -1

Query: 249 EDRDGNDAAIQLEEQQKLLDSRVENAGAEVERII--------TCEEDEDVLLQMSSKLYE 94
           E+ D + AA   EE         E+ GA+V  I+        T EEDEDVLL M +KLY 
Sbjct: 16  EEEDASAAAAAGEE---------EDTGAQVAPIVRLEEVAVTTGEEDEDVLLDMKAKLYR 66

Query: 93  FEGKGDKWKELCPGTVKLLNHKITGKVRLIM 1
           F+  G++WKE   G VKLL HK TGKVRL+M
Sbjct: 67  FDKDGNQWKERGTGAVKLLKHKQTGKVRLVM 97


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