BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010014
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]                       97   2e-18
ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arab...    94   9e-18
gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]              94   9e-18
ref|NP_180567.1| Ran-binding protein 1-b [Arabidopsis thaliana] ...    94   9e-18
ref|NP_172194.1| Ran-binding protein 1-a [Arabidopsis thaliana] ...    93   3e-17

>emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]
          Length = 217

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   GKVRLVMR-SKSLNIYANHRISSGMLVDVYASNSTSCVWAATDFSEGDSKEKLFRIQFGS 177
           GK+RLVMR SK+L I ANH + SGM V  +A N  SCVW A DFS+G+ K++LF I+FGS
Sbjct: 85  GKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFGS 144

Query: 178 VENCDTFMQLFRATVEREEREE 243
           VENC  FMQ F+   E EE +E
Sbjct: 145 VENCKAFMQKFKEVAESEEEKE 166


>ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp.
           lyrata] gi|297325086|gb|EFH55506.1| hypothetical protein
           ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   GKVRLVMR-SKSLNIYANHRISSGMLVDVYASNSTSCVWAATDFSEGDSKEKLFRIQFGS 177
           GK+RLVMR SK+L I ANH + SGM V  +A N  SCVW A DFS+G+ K++LF I+F S
Sbjct: 85  GKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFAS 144

Query: 178 VENCDTFMQLFRATVEREEREE 243
           VENC  FMQ F+   E EE +E
Sbjct: 145 VENCKAFMQKFKEVAESEEEKE 166


>gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]
          Length = 217

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   GKVRLVMR-SKSLNIYANHRISSGMLVDVYASNSTSCVWAATDFSEGDSKEKLFRIQFGS 177
           GK+RLVMR SK+L I ANH + SGM V  +A N  SCVW A DFS+G+ K++LF I+F S
Sbjct: 85  GKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFAS 144

Query: 178 VENCDTFMQLFRATVEREEREE 243
           VENC  FMQ F+   E EE +E
Sbjct: 145 VENCKAFMQKFKEVAESEEEKE 166


>ref|NP_180567.1| Ran-binding protein 1-b [Arabidopsis thaliana]
           gi|76789667|sp|Q8RWG8.2|RBP1B_ARATH RecName:
           Full=Ran-binding protein 1 homolog b
           gi|3150414|gb|AAC16966.1| Ran binding protein
           (AtRanBP1b) [Arabidopsis thaliana]
           gi|20197228|gb|AAM14982.1| Ran binding protein
           (AtRanBP1b) [Arabidopsis thaliana]
           gi|56236138|gb|AAV84525.1| At2g30060 [Arabidopsis
           thaliana] gi|57222134|gb|AAW38974.1| At2g30060
           [Arabidopsis thaliana] gi|88196725|gb|ABD43005.1|
           At2g30060 [Arabidopsis thaliana]
           gi|330253246|gb|AEC08340.1| Ran-binding protein 1-b
           [Arabidopsis thaliana]
          Length = 217

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   GKVRLVMR-SKSLNIYANHRISSGMLVDVYASNSTSCVWAATDFSEGDSKEKLFRIQFGS 177
           GK+RLVMR SK+L I ANH + SGM V  +A N  SCVW A DFS+G+ K++LF I+F S
Sbjct: 85  GKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFAS 144

Query: 178 VENCDTFMQLFRATVEREEREE 243
           VENC  FMQ F+   E EE +E
Sbjct: 145 VENCKAFMQKFKEVAESEEEKE 166


>ref|NP_172194.1| Ran-binding protein 1-a [Arabidopsis thaliana]
           gi|75264036|sp|Q9LMK7.1|RBP1A_ARATH RecName:
           Full=Ran-binding protein 1 homolog a; AltName:
           Full=Ran-binding protein siRanBP
           gi|8954032|gb|AAF82206.1|AC067971_14 Identical to
           atranbp1a from Arabidopsis thaliana gb|X97377. It
           contains a RanBP1 domain PF|00638. ESTs gb|H76544,
           gb|H76880, gb|AA389814, gb|AA712542, gb|T88156,
           gb|N65434 and gb|AA712288 come from this gene
           [Arabidopsis thaliana]
           gi|13877581|gb|AAK43868.1|AF370491_1 Unknown protein
           [Arabidopsis thaliana]
           gi|15294206|gb|AAK95280.1|AF410294_1 At1g07140/F10K1_27
           [Arabidopsis thaliana] gi|20453283|gb|AAM19880.1|
           At1g07140/F10K1_27 [Arabidopsis thaliana]
           gi|25084245|gb|AAN72204.1| Unknown protein [Arabidopsis
           thaliana] gi|332189960|gb|AEE28081.1| Ran-binding
           protein 1-a [Arabidopsis thaliana]
          Length = 228

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   GKVRLVMR-SKSLNIYANHRISSGMLVDVYASNSTSCVWAATDFSEGDSKEKLFRIQFGS 177
           GK+RLVMR SK+L I ANH + SGM V  +  N  SCVW A DF++G+ K++LF I+F S
Sbjct: 83  GKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFAS 142

Query: 178 VENCDTFMQLFRATVEREEREE 243
           +ENC TFMQ F+   E EE +E
Sbjct: 143 IENCKTFMQKFKEVAESEEEKE 164