BLASTX nr result

ID: Coptis23_contig00010013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010013
         (2363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]   548   e-153
ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate transl...   546   e-152
ref|XP_002509428.1| Triose phosphate/phosphate translocator, chl...   541   e-151
ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|2...   533   e-148
ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|2...   525   e-146

>emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]
          Length = 443

 Score =  548 bits (1413), Expect = e-153
 Identities = 302/443 (68%), Positives = 334/443 (75%), Gaps = 10/443 (2%)
 Frame = -2

Query: 2335 MESKVLTNTTTIPTALIRVRKPVRGESVSFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 2156
            MES+VL+  TTI + L+R+RKPVR ++V F   +PI     V  GGNLIWGRQLRPAL+L
Sbjct: 1    MESRVLSGATTI-SGLVRLRKPVR-DTVCFAPARPIGA---VGDGGNLIWGRQLRPALIL 55

Query: 2155 EKSPVIKTSSVKRLXXXXXXXXA----EGSDG-GVVKVGFLEKYPFLITGFFFFMWYFLN 1991
            E +PV+  ++ KR              EGSD  G  K+GFL+KYP L+TGFFFFMWYFLN
Sbjct: 56   ESAPVVGMTTGKREILRPTMASTSSPAEGSDSAGDAKIGFLDKYPALVTGFFFFMWYFLN 115

Query: 1990 VIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVC 1811
            VIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAP+DSN LKLLIPVAVC
Sbjct: 116  VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVAVC 175

Query: 1810 HALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSM 1631
            HALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IPL+LWLSLAPVV+GVSM
Sbjct: 176  HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGVSM 235

Query: 1630 ASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCXXXXXX 1451
            ASLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVC      
Sbjct: 236  ASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVC------ 289

Query: 1450 XXXXXXXXXXXXXXXXXXXXGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVA 1271
                                G +DAIAKVG+TKF+SDLFWVGMFYHLYNQLATNTLERVA
Sbjct: 290  -----IPPALIVEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVA 344

Query: 1270 PLTHAVGNVLKRXXXXXXXXXXXGNKISXXXXXXXXXXXXGVAIYSYLKAKIEEEKRVSL 1091
            PLTHAVGNVLKR           GNKIS            GVA+YS++KAK+EEEKR  L
Sbjct: 345  PLTHAVGNVLKRVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYSFIKAKMEEEKRTKL 404

Query: 1090 ---GTCL--LFQQPDPTQVDKRI 1037
               G C   L +    T VD R+
Sbjct: 405  FMIGRCARSLAEYVRITYVDSRL 427


>ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic
            [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed
            protein product [Vitis vinifera]
          Length = 406

 Score =  546 bits (1406), Expect = e-152
 Identities = 294/417 (70%), Positives = 324/417 (77%), Gaps = 5/417 (1%)
 Frame = -2

Query: 2335 MESKVLTNTTTIPTALIRVRKPVRGESVSFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 2156
            MES+VL+  TTI + L+R+RKPVR ++V F   +PI     V  GGNLIWGRQLRPAL+L
Sbjct: 1    MESRVLSGATTI-SGLVRLRKPVR-DTVCFAPARPIGA---VGDGGNLIWGRQLRPALIL 55

Query: 2155 EKSPVIKTSSVKRLXXXXXXXXA----EGSDG-GVVKVGFLEKYPFLITGFFFFMWYFLN 1991
            E +PV+  ++ KR              EGSD  G  K+GFL+KYP L+TGFFFFMWYFLN
Sbjct: 56   ESAPVVGMTTGKREILRPTMASTSSPAEGSDSAGDAKIGFLDKYPALVTGFFFFMWYFLN 115

Query: 1990 VIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVC 1811
            VIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAP+DSN LKLLIPVAVC
Sbjct: 116  VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVAVC 175

Query: 1810 HALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSM 1631
            HALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IPL+LWLSLAPVV+GVSM
Sbjct: 176  HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGVSM 235

Query: 1630 ASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCXXXXXX 1451
            ASLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVC      
Sbjct: 236  ASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVC------ 289

Query: 1450 XXXXXXXXXXXXXXXXXXXXGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVA 1271
                                G +DAIAKVG+TKF+SDLFWVGMFYHLYNQLATNTLERVA
Sbjct: 290  -----IPPALIVEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVA 344

Query: 1270 PLTHAVGNVLKRXXXXXXXXXXXGNKISXXXXXXXXXXXXGVAIYSYLKAKIEEEKR 1100
            PLTHAVGNVLKR           GNKIS            GVA+YS++KAK+EEEKR
Sbjct: 345  PLTHAVGNVLKRVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYSFIKAKMEEEKR 401


>ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor,
            putative [Ricinus communis] gi|223549327|gb|EEF50815.1|
            Triose phosphate/phosphate translocator, chloroplast
            precursor, putative [Ricinus communis]
          Length = 406

 Score =  541 bits (1393), Expect = e-151
 Identities = 294/416 (70%), Positives = 318/416 (76%), Gaps = 4/416 (0%)
 Frame = -2

Query: 2335 MESKVLTNTTTIPTALIRVRKPVR-GESVSFTVVKPIARDVKVAGGGNLIWGRQLRPALL 2159
            MES+VL+  TT  ++L  +R+P+R   + SF  +KPI     V  GGNLIWGRQLRP+LL
Sbjct: 1    MESRVLSRATTTLSSLPHLRRPMRESNTTSFVSMKPIGT---VGEGGNLIWGRQLRPSLL 57

Query: 2158 LEKSPVIKTSSVKRLXXXXXXXXAEGSDGG---VVKVGFLEKYPFLITGFFFFMWYFLNV 1988
            LE SP  K  ++ R         AEGSD     V  VGF EKYP L+TGFFFFMWYFLNV
Sbjct: 58   LESSPATKRENL-RPTMAAASSPAEGSDSSGDKVAPVGFFEKYPALVTGFFFFMWYFLNV 116

Query: 1987 IFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVCH 1808
            IFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAP+DSN LKLLIPVAVCH
Sbjct: 117  IFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCH 176

Query: 1807 ALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSMA 1628
            ALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IP++LWLSLAPVVIGVSMA
Sbjct: 177  ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMA 236

Query: 1627 SLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCXXXXXXX 1448
            SLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL VC       
Sbjct: 237  SLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC------- 289

Query: 1447 XXXXXXXXXXXXXXXXXXXGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAP 1268
                               G +DAIAKVG TKFI+DLFWVGMFYHLYNQLATNTLERVAP
Sbjct: 290  ----IPPAIIFEGPQLMKYGFNDAIAKVGTTKFITDLFWVGMFYHLYNQLATNTLERVAP 345

Query: 1267 LTHAVGNVLKRXXXXXXXXXXXGNKISXXXXXXXXXXXXGVAIYSYLKAKIEEEKR 1100
            LTHAVGNVLKR           GNKIS            GVA+YS+LKAKIEEEKR
Sbjct: 346  LTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTCIAIAGVAMYSFLKAKIEEEKR 401


>ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  533 bits (1372), Expect = e-148
 Identities = 294/421 (69%), Positives = 315/421 (74%), Gaps = 9/421 (2%)
 Frame = -2

Query: 2335 MESKVLTNTTTIPTALIRVRKPVR----GESVSFTVVKPIARDVKVAGGGNLIWGRQLRP 2168
            MES+VL+  TT+      VR+P+R      S SF  +KPI     V+ GGNLIWG QLRP
Sbjct: 1    MESRVLSRATTVA----HVRRPLRESNGNASCSFLSIKPIGA---VSEGGNLIWGTQLRP 53

Query: 2167 ALLLEKS-PVIKTSSVKRLXXXXXXXXAEGSD----GGVVKVGFLEKYPFLITGFFFFMW 2003
            +LLLE S PV     +           AEGSD    G V  VGF +KYP L+TGFFFFMW
Sbjct: 54   SLLLEASYPVTARKEILWPVMAAASSPAEGSDSSGDGKVAPVGFFDKYPALVTGFFFFMW 113

Query: 2002 YFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIP 1823
            YFLNVIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAPMDSN LKLLIP
Sbjct: 114  YFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLLIP 173

Query: 1822 VAVCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVI 1643
            VAVCHALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQQIP++LWLSLAPVV+
Sbjct: 174  VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPVVL 233

Query: 1642 GVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCXX 1463
            GVS+ASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVC  
Sbjct: 234  GVSVASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVC-- 291

Query: 1462 XXXXXXXXXXXXXXXXXXXXXXXXGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTL 1283
                                    G SD IAKVG+TKFISDLFWVGMFYHLYNQLATNTL
Sbjct: 292  ---------IPPAIILEGPQLIKHGFSDGIAKVGLTKFISDLFWVGMFYHLYNQLATNTL 342

Query: 1282 ERVAPLTHAVGNVLKRXXXXXXXXXXXGNKISXXXXXXXXXXXXGVAIYSYLKAKIEEEK 1103
            ERVAPLTHAVGNVLKR           GNKIS            GVA YSY+KAK+EEEK
Sbjct: 343  ERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTAVAIAGVATYSYIKAKLEEEK 402

Query: 1102 R 1100
            R
Sbjct: 403  R 403


>ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|222848076|gb|EEE85623.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  525 bits (1351), Expect = e-146
 Identities = 288/421 (68%), Positives = 312/421 (74%), Gaps = 9/421 (2%)
 Frame = -2

Query: 2335 MESKVLTNTTTIPTALIRVRKPVR----GESVSFTVVKPIARDVKVAGGGNLIWGRQLRP 2168
            MES+V ++ TTI      VR+P+R      S SF  +KPI     V  GGNLIWGRQLRP
Sbjct: 1    MESRVFSHATTIA----HVRRPLRESHSNTSCSFISIKPIGA---VGEGGNLIWGRQLRP 53

Query: 2167 ALLLE-KSPVIKTSSVKRLXXXXXXXXAEGSD----GGVVKVGFLEKYPFLITGFFFFMW 2003
            +LLLE  SP+     + R         AEGSD    G V  +GF EK P L+TGFFFFMW
Sbjct: 54   SLLLEASSPMNARKDILRPVMAAASSPAEGSDSSGDGKVAPIGFFEKNPALVTGFFFFMW 113

Query: 2002 YFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIP 1823
            YFLNVIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAP+DSN LKLLIP
Sbjct: 114  YFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNLLKLLIP 173

Query: 1822 VAVCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVI 1643
            VAVCHALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQF+LGQ IP++LWLSL PVV+
Sbjct: 174  VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLLPVVL 233

Query: 1642 GVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCXX 1463
            GVSMASLTELSFNW GFISAMISNISFTYRS+YSKKAMTDMDSTN+YAYISIIAL VC  
Sbjct: 234  GVSMASLTELSFNWTGFISAMISNISFTYRSLYSKKAMTDMDSTNIYAYISIIALFVC-- 291

Query: 1462 XXXXXXXXXXXXXXXXXXXXXXXXGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTL 1283
                                    G +DAIAKVG+TKFISDLFWVGMFYHLYNQLATNTL
Sbjct: 292  ---------IPPAILVEGPQLIKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTL 342

Query: 1282 ERVAPLTHAVGNVLKRXXXXXXXXXXXGNKISXXXXXXXXXXXXGVAIYSYLKAKIEEEK 1103
            ERVAPLTHAVGNVLKR           GNKIS            GVA YSY+KAK+EEEK
Sbjct: 343  ERVAPLTHAVGNVLKRVFVIGFSILIFGNKISTQTGIGTGIAIAGVATYSYIKAKMEEEK 402

Query: 1102 R 1100
            R
Sbjct: 403  R 403


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