BLASTX nr result

ID: Coptis23_contig00010012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010012
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38885.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...   382   e-104
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   379   e-103
ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   378   e-102
gb|AFK39131.1| unknown [Lotus japonicus]                              375   e-101

>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  382 bits (982), Expect = e-104
 Identities = 194/221 (87%), Positives = 205/221 (92%)
 Frame = +1

Query: 1   EARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKSMEMEIESLLEKLQDTN 180
           EARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTV SSRSWKSMEMEI+SLLEKL DTN
Sbjct: 18  EARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWKSMEMEIQSLLEKLLDTN 77

Query: 181 DSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSMREHAELLSSVRDDISE 360
           D+MSRCAASA PTTS++ KLARHRDILHEF QEFRRIKGN++SMREHAELLSSVRDDISE
Sbjct: 78  DAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNSMREHAELLSSVRDDISE 137

Query: 361 YKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQRTLLGDVQGKVKQLGD 540
           YKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L SQRTL GD QGKVK L D
Sbjct: 138 YKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNSQRTLFGDFQGKVKLLSD 197

Query: 541 KFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 663
           KFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 198 KFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 238


>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score =  382 bits (982), Expect = e-104
 Identities = 194/221 (87%), Positives = 205/221 (92%)
 Frame = +1

Query: 1   EARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKSMEMEIESLLEKLQDTN 180
           EARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTV SSRSWKSMEMEI+SLLEKL DTN
Sbjct: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWKSMEMEIQSLLEKLLDTN 78

Query: 181 DSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSMREHAELLSSVRDDISE 360
           D+MSRCAASA PTTS++ KLARHRDILHEF QEFRRIKGN++SMREHAELLSSVRDDISE
Sbjct: 79  DAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNSMREHAELLSSVRDDISE 138

Query: 361 YKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQRTLLGDVQGKVKQLGD 540
           YKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L SQRTL GD QGKVK L D
Sbjct: 139 YKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNSQRTLFGDFQGKVKLLSD 198

Query: 541 KFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 663
           KFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 199 KFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  379 bits (973), Expect = e-103
 Identities = 191/221 (86%), Positives = 204/221 (92%)
 Frame = +1

Query: 1   EARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKSMEMEIESLLEKLQDTN 180
           EARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTVGS RSWKSMEMEI+SLLEKL D N
Sbjct: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSWKSMEMEIQSLLEKLLDIN 78

Query: 181 DSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSMREHAELLSSVRDDISE 360
           DSMSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGNI+SMREHAELLSSVRDDISE
Sbjct: 79  DSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSMREHAELLSSVRDDISE 138

Query: 361 YKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQRTLLGDVQGKVKQLGD 540
           YKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQR+L  DVQGKVK LGD
Sbjct: 139 YKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGD 198

Query: 541 KFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 663
           KFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 199 KFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  378 bits (970), Expect = e-102
 Identities = 190/221 (85%), Positives = 204/221 (92%)
 Frame = +1

Query: 1   EARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKSMEMEIESLLEKLQDTN 180
           EARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTVGS RSWKSMEMEI+SLLEKL D N
Sbjct: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDIN 78

Query: 181 DSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSMREHAELLSSVRDDISE 360
           DSMSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGNI+S+REHAELLSSVRDDISE
Sbjct: 79  DSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLSSVRDDISE 138

Query: 361 YKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQRTLLGDVQGKVKQLGD 540
           YKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQR+L  DVQGKVK LGD
Sbjct: 139 YKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGD 198

Query: 541 KFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 663
           KFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 199 KFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  375 bits (962), Expect = e-101
 Identities = 190/221 (85%), Positives = 203/221 (91%)
 Frame = +1

Query: 1   EARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKSMEMEIESLLEKLQDTN 180
           EARKIEGDLDVKLSSYAKL  RFTQGGY D GSP +GSSRSWKSMEMEI+SLLEKL D N
Sbjct: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDIN 78

Query: 181 DSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSMREHAELLSSVRDDISE 360
           DSMSRCAASA P TS++ KLARHRDILHEF QEFRRIKGNI+SMREHAELL+SVRDDIS+
Sbjct: 79  DSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISD 138

Query: 361 YKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQRTLLGDVQGKVKQLGD 540
           +K SGSMSPRMQLLRERAAIHGS+SHIDDVISQAQ TR+VLGSQR L GDVQGKVK LGD
Sbjct: 139 FKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGKVKVLGD 198

Query: 541 KFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 663
           KFPIIR LLG+I+RKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 199 KFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


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