BLASTX nr result

ID: Coptis23_contig00009987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009987
         (1689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycin...   573   e-161
ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   573   e-161
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   572   e-160
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   570   e-160
ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...   569   e-160

>ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycine max]
            gi|255644673|gb|ACU22839.1| unknown [Glycine max]
          Length = 427

 Score =  573 bits (1478), Expect = e-161
 Identities = 285/391 (72%), Positives = 319/391 (81%), Gaps = 1/391 (0%)
 Frame = -1

Query: 1371 SYGGGVVPLQ-RTLDRRYSRIADQYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGA 1195
            SYGGG  P Q ++LDR+YSRI D Y SL+QVT+ALA AGLESSNLIVGIDFTKSNEWTG 
Sbjct: 45   SYGGGRAPEQGKSLDRKYSRIGDDYKSLDQVTDALAKAGLESSNLIVGIDFTKSNEWTGG 104

Query: 1194 RSFNRKSLHHIGDVQNPYEQAISIIGRTISAFDEDNLIPCFGFGDASTHDQDVFSFYEEG 1015
            RSF R+ LHHIG  QNPYEQAISIIG+T+S+FDEDNLIPCFGFGDASTHDQ+VFSFY + 
Sbjct: 105  RSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDE 164

Query: 1014 RSCNGFEEALVRYREIVPSLKLAGPTSFAPMIEMAMTIVEESGGQYHVLLIIADGQVTRS 835
            R C GFEE L RYRE+VP LKLAGPTSFAP+IEMA+TIVE+SGGQYHVL+IIADGQVTRS
Sbjct: 165  RFCRGFEEVLERYRELVPQLKLAGPTSFAPVIEMAITIVEQSGGQYHVLVIIADGQVTRS 224

Query: 834  VDTEHGHLSPQEQKTVETIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFV 655
            VDTEHG LS QE+KTVE IVKASEYPLSI+LVGVGDGPWDMMK+FDDNIPAR+FDNFQFV
Sbjct: 225  VDTEHGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMKQFDDNIPARAFDNFQFV 284

Query: 654  NFTEIMSKSVPVPRRETLFALTALMEIPSQYKATMELKLLGHQTGRSPGRFPLPPPVYGA 475
            NFTEIMSK++   R+ET FAL ALMEIPSQYKAT+EL +LG   G+   R PLPPP+YGA
Sbjct: 285  NFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGACRGKDIDRIPLPPPLYGA 344

Query: 474  AXXXXXXXXXXXXXXXXXXXXSAPLYPVPEKTIGTAPPESSAFDNQVCPICLSNAKDMAF 295
            A                    S P  P     + T PP +SA DNQVCPICL++ KDMAF
Sbjct: 345  A--------SFNSPKTSRQYSSRPSAPSSRHDVSTNPPATSASDNQVCPICLTDPKDMAF 396

Query: 294  GCGHLTCCDCGKDLQLCPICRNPIQTRIKLY 202
            GCGH TCCDCG+DL+LCPICR+ I TRIKLY
Sbjct: 397  GCGHQTCCDCGQDLELCPICRSTIDTRIKLY 427


>ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
            gi|296081383|emb|CBI16816.3| unnamed protein product
            [Vitis vinifera]
          Length = 442

 Score =  573 bits (1476), Expect = e-161
 Identities = 284/390 (72%), Positives = 317/390 (81%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1368 YGGGVVPLQRT-LDRRYSRIADQYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGAR 1192
            Y G   P +   LDRRYSRIAD YNSL+QVT ALA AGLESSNLIVGIDFTKSNEWTG+R
Sbjct: 56   YSGAQTPHRHPQLDRRYSRIADNYNSLDQVTAALAQAGLESSNLIVGIDFTKSNEWTGSR 115

Query: 1191 SFNRKSLHHIGDVQNPYEQAISIIGRTISAFDEDNLIPCFGFGDASTHDQDVFSFYEEGR 1012
            SFNRKSLHHIG  QNPYEQAISIIG+T+SAFDEDNLIPCFGFGDASTHDQD+FSFY++ R
Sbjct: 116  SFNRKSLHHIGRGQNPYEQAISIIGKTLSAFDEDNLIPCFGFGDASTHDQDIFSFYQDER 175

Query: 1011 SCNGFEEALVRYREIVPSLKLAGPTSFAPMIEMAMTIVEESGGQYHVLLIIADGQVTRSV 832
             CNGFEE L+RYRE+VPSL+LAGPTSFAP+IEMA TIVE+SGGQYHVLLIIADGQVTRSV
Sbjct: 176  PCNGFEEVLMRYRELVPSLRLAGPTSFAPIIEMASTIVEKSGGQYHVLLIIADGQVTRSV 235

Query: 831  DTEHGHLSPQEQKTVETIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFVN 652
            DT+HG LS QEQKT++ IVKAS+YPLSI+LVGVGDGPWD+M+EFDDNIPAR+FDNFQFVN
Sbjct: 236  DTQHGQLSSQEQKTIDAIVKASKYPLSIILVGVGDGPWDVMREFDDNIPARAFDNFQFVN 295

Query: 651  FTEIMSKSVPVPRRETLFALTALMEIPSQYKATMELKLLGHQTGRSPGRFPLPPPVYGAA 472
            FTEIMSK+V   R +T FAL ALMEIPSQYKAT++L  LG + G +P R  LPPP YG  
Sbjct: 296  FTEIMSKNVDSSRTQTEFALAALMEIPSQYKATIDLNTLGVRRGNAPTRVALPPPQYGT- 354

Query: 471  XXXXXXXXXXXXXXXXXXXXSAPLYPVPEKTIGTAPPESSAFDNQVCPICLSNAKDMAFG 292
                                SA  YP  E  + T P  +S +DN+VCPICLSN KDMAFG
Sbjct: 355  ---PSFSSSSKPYHSNSFQKSAESYPEYEAAVSTGPSSNSLYDNKVCPICLSNPKDMAFG 411

Query: 291  CGHLTCCDCGKDLQLCPICRNPIQTRIKLY 202
            CGH TCC+CG DL  CPICR+PIQTRIKLY
Sbjct: 412  CGHQTCCECGVDLNSCPICRSPIQTRIKLY 441


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  572 bits (1473), Expect = e-160
 Identities = 288/391 (73%), Positives = 320/391 (81%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1359 GVVPLQRTLDRRYSRIADQYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGARSFNR 1180
            G V   R LDRRYSRIAD YNSLE+VTEALA AGLESSNLIVGIDFTKSNEWTGARSFNR
Sbjct: 57   GNVDNGRRLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNR 116

Query: 1179 KSLHHIGDVQNPYEQAISIIGRTISAFDEDNLIPCFGFGDASTHDQDVFSFY-EEGRSCN 1003
            +SLHHIGD  NPY+QAISIIG+T++AFD+DNLIPCFGFGDASTHDQDVFSF+ EE R CN
Sbjct: 117  RSLHHIGDQPNPYQQAISIIGKTLAAFDDDNLIPCFGFGDASTHDQDVFSFFPEEERFCN 176

Query: 1002 GFEEALVRYREIVPSLKLAGPTSFAPMIEMAMTIVEESGGQYHVLLIIADGQVTRSVDTE 823
            GFEE L RY+EI P L+LAGPTSFAP+IEMAMTIVE+SGGQYHVLLIIADGQVTRSVDTE
Sbjct: 177  GFEEVLNRYQEIAPHLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTE 236

Query: 822  HGHLSPQEQKTVETIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTE 643
             G LSPQEQKTV+ IV+AS++PLSIVLVGVGDGPWDMM+EFDDNIP+R+FDNFQFVNFTE
Sbjct: 237  RGRLSPQEQKTVDAIVEASKFPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTE 296

Query: 642  IMSKSVPVPRRETLFALTALMEIPSQYKATMELKLLGHQTGRSPGRFPLPPPVYGAAXXX 463
            IMSK++P  R+ET FAL ALMEIPSQYKAT+EL +LG + G SP R  LPPPVYGAA   
Sbjct: 297  IMSKNIPTSRKETEFALAALMEIPSQYKATIELDILGGRKGVSPQRVALPPPVYGAASLN 356

Query: 462  XXXXXXXXXXXXXXXXXSA-PLYPV---PEKTIGTAPPESSAFDNQVCPICLSNAKDMAF 295
                              + P + V   P  T    P  SS +DNQVCPICL+N KDMAF
Sbjct: 357  SSKSFSNSKPTWSSSYEPSVPSFSVNRNPTPTSTAPPVASSTYDNQVCPICLTNPKDMAF 416

Query: 294  GCGHLTCCDCGKDLQLCPICRNPIQTRIKLY 202
            GCGH TCC+CG+DLQ CPICR+ I TRIKLY
Sbjct: 417  GCGHQTCCECGQDLQTCPICRSTIHTRIKLY 447


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
            gi|296087586|emb|CBI34842.3| unnamed protein product
            [Vitis vinifera]
          Length = 461

 Score =  570 bits (1468), Expect = e-160
 Identities = 281/382 (73%), Positives = 316/382 (82%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1344 QRTLDRRYSRIADQYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHH 1165
            +R L+R YSRIAD Y SL++VT ALA AGLESSNLIVGIDFTKSNEWTGARSFNR+SLHH
Sbjct: 83   RRRLERMYSRIADDYRSLDEVTAALARAGLESSNLIVGIDFTKSNEWTGARSFNRQSLHH 142

Query: 1164 IGDVQNPYEQAISIIGRTISAFDEDNLIPCFGFGDASTHDQDVFSFYEEGRSCNGFEEAL 985
            +GD  NPY+QAISIIG+T++AFDEDN+IPCFGFGDASTHDQDVFSFYE+ R CNGFEE L
Sbjct: 143  VGDGLNPYQQAISIIGKTLAAFDEDNMIPCFGFGDASTHDQDVFSFYEDERFCNGFEEVL 202

Query: 984  VRYREIVPSLKLAGPTSFAPMIEMAMTIVEESGGQYHVLLIIADGQVTRSVDTEHGHLSP 805
             RYREIVP L+LAGPTSFAP+IEMAMTIV  SGGQYHVL+IIADGQVTRSVDT HG LSP
Sbjct: 203  SRYREIVPRLRLAGPTSFAPIIEMAMTIVNHSGGQYHVLVIIADGQVTRSVDTAHGQLSP 262

Query: 804  QEQKTVETIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTEIMSKSV 625
            QEQKTVE IV+AS+ PLSI+LVGVGDGPWDMM+EFDDNIPAR+FDNFQFVNFTEIMSK+V
Sbjct: 263  QEQKTVEAIVEASKLPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNV 322

Query: 624  PVPRRETLFALTALMEIPSQYKATMELKLLGHQTGRSPGRFPLPPPVYGAAXXXXXXXXX 445
             + R+ET FAL ALMEIPSQYKAT+EL +LG + G +P R PLP P+Y  A         
Sbjct: 323  DLSRKETEFALAALMEIPSQYKATIELNILGGRKGDAPERVPLPTPMYYGA---TSFFNS 379

Query: 444  XXXXXXXXXXXSAPLYPVPEKTIGTAPP-ESSAFDNQVCPICLSNAKDMAFGCGHLTCCD 268
                       S P YP     +GTAPP  SS FDNQ+CPICL+N K+MAFGCGH TCC+
Sbjct: 380  SKPSRTTSFQPSVPPYPEDSSPVGTAPPATSSTFDNQLCPICLTNVKNMAFGCGHQTCCE 439

Query: 267  CGKDLQLCPICRNPIQTRIKLY 202
            CG DL+ CPICR+PIQTRIKLY
Sbjct: 440  CGPDLETCPICRSPIQTRIKLY 461


>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
            copine, putative [Ricinus communis]
          Length = 433

 Score =  569 bits (1466), Expect = e-160
 Identities = 282/390 (72%), Positives = 317/390 (81%)
 Frame = -1

Query: 1371 SYGGGVVPLQRTLDRRYSRIADQYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGAR 1192
            SYGG      R L+R+YS+I D YNSLEQVT+ALA +GLESSNLIVGIDFTKSNEWTGAR
Sbjct: 46   SYGGQAPNSGRRLERKYSKIDDNYNSLEQVTDALARSGLESSNLIVGIDFTKSNEWTGAR 105

Query: 1191 SFNRKSLHHIGDVQNPYEQAISIIGRTISAFDEDNLIPCFGFGDASTHDQDVFSFYEEGR 1012
            SFNR+SLHHIGD QNPYEQAISIIG+T+S+FDEDNLIPCFGFGDASTHDQ+VFSF  +  
Sbjct: 106  SFNRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFNSDES 165

Query: 1011 SCNGFEEALVRYREIVPSLKLAGPTSFAPMIEMAMTIVEESGGQYHVLLIIADGQVTRSV 832
             CNGFEE L RYRE+VP L+LAGPTSFAP+IEMA+TIVE+SGGQYHVL+IIADGQVTRSV
Sbjct: 166  FCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEQSGGQYHVLVIIADGQVTRSV 225

Query: 831  DTEHGHLSPQEQKTVETIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFVN 652
            DT+HG LSPQE++TVE IVKASEYPLSI+LVGVGDGPWDMMKEFDDNIPAR+FDNFQFVN
Sbjct: 226  DTQHGQLSPQEKRTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVN 285

Query: 651  FTEIMSKSVPVPRRETLFALTALMEIPSQYKATMELKLLGHQTGRSPGRFPLPPPVYGAA 472
            FTEIMSK+V   ++E  FAL ALMEIPSQY+AT+EL +LG   G++  R PLPPP YGAA
Sbjct: 286  FTEIMSKNVDRSKKEAEFALAALMEIPSQYRATLELSILGSTRGKAIDRIPLPPPQYGAA 345

Query: 471  XXXXXXXXXXXXXXXXXXXXSAPLYPVPEKTIGTAPPESSAFDNQVCPICLSNAKDMAFG 292
                                S+  Y         APP SS  DN +CPICL+NAKDMAFG
Sbjct: 346  --TLSNSKPSRSSSFHPSAPSSGRYNAQAAGTAPAPPASSTSDNHLCPICLTNAKDMAFG 403

Query: 291  CGHLTCCDCGKDLQLCPICRNPIQTRIKLY 202
            CGH TCCDCG+DLQLCPICR+ I TRIKLY
Sbjct: 404  CGHQTCCDCGQDLQLCPICRSSINTRIKLY 433


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