BLASTX nr result

ID: Coptis23_contig00009983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009983
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   3e-11
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               72   4e-10
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    67   8e-09
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   2e-08
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    65   3e-08

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
 Frame = -3

Query: 389 IHAWNCRGIGSSTAAQNLKDLVRQHQPDIICLSETKVKEDKISKLGKALKYDNMFCVPAV 210
           I +WNCRG+GS +A   L+ L+    P I+ LSETK+K  ++  + K LK+++M  V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 209 G----RRGGLAILWRTGVNLVVLGATANQIS---GGQEMGQLEF 99
           G    RRGGLA+LWR+ + + V+  ++N I    G +  G+  F
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRF 107


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = -3

Query: 380 WNCRGIGSSTAAQNLKDLVRQHQPDIICLSETKVKEDKISKLGKALKYDNMFCVPAVGRR 201
           WNC+G+G     + LK++ R++ PD+ICLSETK + D +      L + N   VP++G  
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 200 GGLAILWRTGVNLVVLGATANQISGGQEMGQLEFWLGIM 84
           GGL +LW+  V++ V   + N +    +  ++ F L  +
Sbjct: 119 GGLVVLWKPSVHISVSFNSPNLVDCYVQSNEVGFNLSFV 157


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 27/75 (36%), Positives = 44/75 (58%)
 Frame = -3

Query: 380 WNCRGIGSSTAAQNLKDLVRQHQPDIICLSETKVKEDKISKLGKALKYDNMFCVPAVGRR 201
           WNCRGIG+    + L+DL + + P ++ + ET++ + ++  L   L +DN F V + GR 
Sbjct: 6   WNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRS 65

Query: 200 GGLAILWRTGVNLVV 156
           GGL + W   V L +
Sbjct: 66  GGLGLFWNNDVLLSI 80


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 33/93 (35%), Positives = 51/93 (54%)
 Frame = -3

Query: 389 IHAWNCRGIGSSTAAQNLKDLVRQHQPDIICLSETKVKEDKISKLGKALKYDNMFCVPAV 210
           I  WNCRG+G+  + + L+    Q  PDII +SET + + ++  L   L + N F V +V
Sbjct: 3   ILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVASV 62

Query: 209 GRRGGLAILWRTGVNLVVLGATANQISGGQEMG 111
           GR GGL + W+  V   ++  + + I G  E G
Sbjct: 63  GRAGGLCLYWKEEVMFSLVSFSQHHICGDVEDG 95


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -3

Query: 383 AWNCRGIGSSTAAQNLKDLVRQHQPDIICLSETKVKEDKISKLGKALKYDNMFCVPAVGR 204
           +WNCRG+G+      L ++ +  +PD I L ET V   ++ KL   L ++  FCV  VGR
Sbjct: 311 SWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGR 370

Query: 203 RGGLAILWR 177
            GGLA LWR
Sbjct: 371 GGGLAFLWR 379


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