BLASTX nr result

ID: Coptis23_contig00009982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009982
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycin...   244   2e-62
ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago ...   238   1e-60
ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago ...   238   1e-60
ref|XP_002527410.1| RNA binding protein, putative [Ricinus commu...   238   2e-60
ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205...   235   1e-59

>ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycine max]
           gi|255631798|gb|ACU16266.1| unknown [Glycine max]
          Length = 240

 Score =  244 bits (624), Expect = 2e-62
 Identities = 127/175 (72%), Positives = 143/175 (81%), Gaps = 2/175 (1%)
 Frame = +3

Query: 228 VSKLLKLNKPATT--KHEEVDDELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYE 401
           +S LLK   P  T    EEV DE Y+G E+WLP PPKV  P RS++NAA+LAYIGDCIYE
Sbjct: 58  ISDLLKRATPLPTIGHIEEVQDETYLGYEKWLPTPPKVVKP-RSVFNAATLAYIGDCIYE 116

Query: 402 LYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNIDSG 581
           LYARRHFL+PPLSIEEYNDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI S 
Sbjct: 117 LYARRHFLFPPLSIEEYNDRVMAVVRCEAQDALLQKLLESNFLSDQERDVLRWGKNIVSN 176

Query: 582 KTRTTKRAGVAVYNRASSLETLVGYLYLTNAMRLEDLMVKLGFTTAASNRLIMEE 746
           KT+T KRAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  +S  L +EE
Sbjct: 177 KTKTKKRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSSVALNVEE 231


>ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago truncatula]
           gi|355502314|gb|AES83517.1| hypothetical protein
           MTR_040s0004 [Medicago truncatula]
          Length = 279

 Score =  238 bits (608), Expect = 1e-60
 Identities = 126/177 (71%), Positives = 144/177 (81%), Gaps = 4/177 (2%)
 Frame = +3

Query: 228 VSKLLKLNKPATT--KHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCI 395
           +S LLK   P  T  K EEV   DE Y+G +RWLP PPKV  P RS++NAA+LAYIGDCI
Sbjct: 70  ISDLLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKP-RSVFNAATLAYIGDCI 128

Query: 396 YELYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNID 575
           YELYARRHFL+PPLSIEE+NDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI 
Sbjct: 129 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKLLISNFLSDQERDVLRWGKNII 188

Query: 576 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNAMRLEDLMVKLGFTTAASNRLIMEE 746
           S KT+T +RAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  +S  L +EE
Sbjct: 189 SSKTKTKRRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSSMPLNLEE 245


>ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago truncatula]
           gi|355486666|gb|AES67869.1| hypothetical protein
           MTR_2g100220 [Medicago truncatula]
          Length = 258

 Score =  238 bits (608), Expect = 1e-60
 Identities = 126/177 (71%), Positives = 144/177 (81%), Gaps = 4/177 (2%)
 Frame = +3

Query: 228 VSKLLKLNKPATT--KHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCI 395
           +S LLK   P  T  K EEV   DE Y+G +RWLP PPKV  P RS++NAA+LAYIGDCI
Sbjct: 70  ISDLLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKP-RSVFNAATLAYIGDCI 128

Query: 396 YELYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNID 575
           YELYARRHFL+PPLSIEE+NDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI 
Sbjct: 129 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKLLISNFLSDQERDVLRWGKNII 188

Query: 576 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNAMRLEDLMVKLGFTTAASNRLIMEE 746
           S KT+T +RAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  +S  L +EE
Sbjct: 189 SSKTKTKRRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSSMPLNLEE 245


>ref|XP_002527410.1| RNA binding protein, putative [Ricinus communis]
           gi|223533220|gb|EEF34976.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 248

 Score =  238 bits (606), Expect = 2e-60
 Identities = 121/173 (69%), Positives = 143/173 (82%)
 Frame = +3

Query: 225 NVSKLLKLNKPATTKHEEVDDELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYEL 404
           +VS LLK N       +++DD  Y+G ERW+P PPKV  P RS+YNAA+LAYIGD IYEL
Sbjct: 66  SVSNLLKRNTTPQGVMKKLDDT-YLGYERWMPTPPKVEKP-RSVYNAATLAYIGDSIYEL 123

Query: 405 YARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNIDSGK 584
           YARRHFL+PPLSIEEYNDRVM+VVRCEAQDALL KLL+ +FLS++ERDVLRWGKNI S K
Sbjct: 124 YARRHFLFPPLSIEEYNDRVMSVVRCEAQDALLHKLLNDNFLSKEERDVLRWGKNIASAK 183

Query: 585 TRTTKRAGVAVYNRASSLETLVGYLYLTNAMRLEDLMVKLGFTTAASNRLIME 743
           TRT KRAG AVYNRASSLETLVGYLYLT+  RLE++M+KLGF+  +S  ++ E
Sbjct: 184 TRTKKRAGAAVYNRASSLETLVGYLYLTDVTRLEEVMLKLGFSVDSSTPVLEE 236


>ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205919 [Cucumis sativus]
          Length = 245

 Score =  235 bits (599), Expect = 1e-59
 Identities = 119/176 (67%), Positives = 145/176 (82%), Gaps = 3/176 (1%)
 Frame = +3

Query: 228 VSKLLKLNKPATTKHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYE 401
           VS LL    P++ +  +++  D LY+G ++WLP PPKV  P RS++NAASLAYIGDCIYE
Sbjct: 63  VSDLLNRRNPSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKP-RSVFNAASLAYIGDCIYE 121

Query: 402 LYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNI-DS 578
           LYARRHFL+PPLSIEEYNDRVMAVVRCEAQD LL+KLL+ +FL+E ERD+LRWGKN+  S
Sbjct: 122 LYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGSS 181

Query: 579 GKTRTTKRAGVAVYNRASSLETLVGYLYLTNAMRLEDLMVKLGFTTAASNRLIMEE 746
            KTRT KRAG AVYNRASSLETL+GYLYL N  RL+++M KLGF+T +S ++I EE
Sbjct: 182 SKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQMISEE 237


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