BLASTX nr result

ID: Coptis23_contig00009978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009978
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301767.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_002321236.1| predicted protein [Populus trichocarpa] gi|1...   197   1e-48
ref|XP_003532239.1| PREDICTED: adrenodoxin-like protein, mitocho...   190   1e-46
ref|NP_566309.1| 2Fe-2S ferredoxin-like protein [Arabidopsis tha...   188   3e-46
ref|XP_004148948.1| PREDICTED: adrenodoxin-like protein, mitocho...   185   3e-45

>ref|XP_002301767.1| predicted protein [Populus trichocarpa] gi|222843493|gb|EEE81040.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  204 bits (519), Expect = 6e-51
 Identities = 97/125 (77%), Positives = 111/125 (88%)
 Frame = -2

Query: 385 STSSSSAKVSDRIVNLFAIDPDGEKHSIIGLSGHTLLKALTNRELIDPESHRLEEIDACS 206
           +T++S+AKV+DRIV L AIDPDG+K  I+GLSGHTLLKALTN  LIDP SHRLEEI+ACS
Sbjct: 32  ATTTSAAKVADRIVKLSAIDPDGQKREIVGLSGHTLLKALTNNGLIDPASHRLEEIEACS 91

Query: 205 AECEVYIAEEWLEKLPPKTYDESYVLKRNSRAKGLNKHSRLACQVILNHGLQGMVVAVPE 26
           AECEV IA+EWLEKLPP++YDE YVLKRNSRA+ LNKHSRL CQV+L   LQGMVVAVPE
Sbjct: 92  AECEVNIAQEWLEKLPPRSYDEEYVLKRNSRARVLNKHSRLGCQVVLTKDLQGMVVAVPE 151

Query: 25  PRPWD 11
           P+PWD
Sbjct: 152 PKPWD 156


>ref|XP_002321236.1| predicted protein [Populus trichocarpa] gi|118484792|gb|ABK94264.1|
           unknown [Populus trichocarpa]
           gi|222862009|gb|EEE99551.1| predicted protein [Populus
           trichocarpa]
          Length = 152

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/121 (77%), Positives = 106/121 (87%)
 Frame = -2

Query: 373 SSAKVSDRIVNLFAIDPDGEKHSIIGLSGHTLLKALTNRELIDPESHRLEEIDACSAECE 194
           SSAKV+DRIV L AIDPDG+K  I+GLSG TLLKAL N  LIDP SHRLEEI+ACSAECE
Sbjct: 30  SSAKVADRIVKLSAIDPDGQKREIVGLSGQTLLKALANNGLIDPASHRLEEIEACSAECE 89

Query: 193 VYIAEEWLEKLPPKTYDESYVLKRNSRAKGLNKHSRLACQVILNHGLQGMVVAVPEPRPW 14
           V IA+EWLE+LPP++YDE YVLKRNSRA+ LNKHSRL+CQV+L   LQGMVVAVPEP+PW
Sbjct: 90  VNIAQEWLERLPPRSYDEEYVLKRNSRARVLNKHSRLSCQVVLTQDLQGMVVAVPEPKPW 149

Query: 13  D 11
           D
Sbjct: 150 D 150


>ref|XP_003532239.1| PREDICTED: adrenodoxin-like protein, mitochondrial-like [Glycine
           max]
          Length = 158

 Score =  190 bits (482), Expect = 1e-46
 Identities = 89/125 (71%), Positives = 108/125 (86%)
 Frame = -2

Query: 385 STSSSSAKVSDRIVNLFAIDPDGEKHSIIGLSGHTLLKALTNRELIDPESHRLEEIDACS 206
           ++SSS+ KV+DRIV L AID  G+KH ++GL+G TLLKAL N  L+DPESHRLEEIDAC+
Sbjct: 32  TSSSSTKKVADRIVRLSAIDFAGKKHEVVGLAGQTLLKALINTGLVDPESHRLEEIDACA 91

Query: 205 AECEVYIAEEWLEKLPPKTYDESYVLKRNSRAKGLNKHSRLACQVILNHGLQGMVVAVPE 26
           A CEV IA+EWL+KLPP++YDE YVL RNSRA+ LNKHSRL CQV+L+H L+GMVVA+PE
Sbjct: 92  AHCEVNIAQEWLDKLPPRSYDEEYVLVRNSRARVLNKHSRLGCQVLLDHDLEGMVVALPE 151

Query: 25  PRPWD 11
           PRPWD
Sbjct: 152 PRPWD 156


>ref|NP_566309.1| 2Fe-2S ferredoxin-like protein [Arabidopsis thaliana]
           gi|297829298|ref|XP_002882531.1| electron carrier/ iron
           ion binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|6041858|gb|AAF02167.1|AC009853_27 unknown protein
           [Arabidopsis thaliana]
           gi|14423424|gb|AAK62394.1|AF386949_1 Unknown protein
           [Arabidopsis thaliana] gi|20148369|gb|AAM10075.1|
           unknown protein [Arabidopsis thaliana]
           gi|21555779|gb|AAM63932.1| unknown [Arabidopsis
           thaliana] gi|297328371|gb|EFH58790.1| electron carrier/
           iron ion binding protein [Arabidopsis lyrata subsp.
           lyrata] gi|332641027|gb|AEE74548.1| 2Fe-2S
           ferredoxin-like protein [Arabidopsis thaliana]
          Length = 159

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/125 (74%), Positives = 104/125 (83%)
 Frame = -2

Query: 385 STSSSSAKVSDRIVNLFAIDPDGEKHSIIGLSGHTLLKALTNRELIDPESHRLEEIDACS 206
           S S  S KVSDRIV L AIDPDG K  IIGLSG TLL+ALT+  LIDP SHRL++I+ACS
Sbjct: 33  SPSLGSKKVSDRIVKLSAIDPDGYKQDIIGLSGQTLLRALTHTGLIDPASHRLDDIEACS 92

Query: 205 AECEVYIAEEWLEKLPPKTYDESYVLKRNSRAKGLNKHSRLACQVILNHGLQGMVVAVPE 26
           AECEV IAEEWLEKLPP+TYDE YVLKR+SR++ LNKHSRL CQV+L   LQGMVVAVPE
Sbjct: 93  AECEVQIAEEWLEKLPPRTYDEEYVLKRSSRSRILNKHSRLGCQVVLTQELQGMVVAVPE 152

Query: 25  PRPWD 11
            +PWD
Sbjct: 153 AKPWD 157


>ref|XP_004148948.1| PREDICTED: adrenodoxin-like protein, mitochondrial-like [Cucumis
           sativus] gi|449522097|ref|XP_004168064.1| PREDICTED:
           adrenodoxin-like protein, mitochondrial-like [Cucumis
           sativus]
          Length = 164

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/124 (70%), Positives = 104/124 (83%)
 Frame = -2

Query: 382 TSSSSAKVSDRIVNLFAIDPDGEKHSIIGLSGHTLLKALTNRELIDPESHRLEEIDACSA 203
           +SSSS KVSDR + LFA D +G K  I+GL+G TLLKAL NR LIDP+SHRLE+IDACSA
Sbjct: 39  SSSSSKKVSDRTIKLFAYDLEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEQIDACSA 98

Query: 202 ECEVYIAEEWLEKLPPKTYDESYVLKRNSRAKGLNKHSRLACQVILNHGLQGMVVAVPEP 23
           ECEV IA++W+ KLPP++YDE YVLKRNSRA+ LNK+SRL CQVIL   L+GMVV VPEP
Sbjct: 99  ECEVRIAQDWINKLPPRSYDEEYVLKRNSRARTLNKNSRLGCQVILTPDLEGMVVVVPEP 158

Query: 22  RPWD 11
           +PWD
Sbjct: 159 KPWD 162


Top