BLASTX nr result

ID: Coptis23_contig00009977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009977
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301767.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002321236.1| predicted protein [Populus trichocarpa] gi|1...   114   6e-24
ref|NP_566309.1| 2Fe-2S ferredoxin-like protein [Arabidopsis tha...   110   1e-22
ref|XP_004148948.1| PREDICTED: adrenodoxin-like protein, mitocho...   107   1e-21
ref|XP_003532239.1| PREDICTED: adrenodoxin-like protein, mitocho...   106   2e-21

>ref|XP_002301767.1| predicted protein [Populus trichocarpa] gi|222843493|gb|EEE81040.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/108 (62%), Positives = 76/108 (70%)
 Frame = +3

Query: 39  KSLITRSSAPTPYERAMASDTIAASKFLARLVRLYAIDRDGEKHAIVGFSGHTLLKALTN 218
           KS++TRSSA T           +A+K   R+V+L AID DG+K  IVG SGHTLLKALTN
Sbjct: 24  KSILTRSSATTT----------SAAKVADRIVKLSAIDPDGQKREIVGLSGHTLLKALTN 73

Query: 219 RRFIDPGSHSLEESDTCSAECEVYIDEEWLEKLPPMSYDESCVLKRNS 362
              IDP SH LEE + CSAECEV I +EWLEKLPP SYDE  VLKRNS
Sbjct: 74  NGLIDPASHRLEEIEACSAECEVNIAQEWLEKLPPRSYDEEYVLKRNS 121


>ref|XP_002321236.1| predicted protein [Populus trichocarpa] gi|118484792|gb|ABK94264.1|
           unknown [Populus trichocarpa]
           gi|222862009|gb|EEE99551.1| predicted protein [Populus
           trichocarpa]
          Length = 152

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/108 (58%), Positives = 70/108 (64%)
 Frame = +3

Query: 39  KSLITRSSAPTPYERAMASDTIAASKFLARLVRLYAIDRDGEKHAIVGFSGHTLLKALTN 218
           KSL+TRSSA                K   R+V+L AID DG+K  IVG SG TLLKAL N
Sbjct: 24  KSLLTRSSA----------------KVADRIVKLSAIDPDGQKREIVGLSGQTLLKALAN 67

Query: 219 RRFIDPGSHSLEESDTCSAECEVYIDEEWLEKLPPMSYDESCVLKRNS 362
              IDP SH LEE + CSAECEV I +EWLE+LPP SYDE  VLKRNS
Sbjct: 68  NGLIDPASHRLEEIEACSAECEVNIAQEWLERLPPRSYDEEYVLKRNS 115


>ref|NP_566309.1| 2Fe-2S ferredoxin-like protein [Arabidopsis thaliana]
           gi|297829298|ref|XP_002882531.1| electron carrier/ iron
           ion binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|6041858|gb|AAF02167.1|AC009853_27 unknown protein
           [Arabidopsis thaliana]
           gi|14423424|gb|AAK62394.1|AF386949_1 Unknown protein
           [Arabidopsis thaliana] gi|20148369|gb|AAM10075.1|
           unknown protein [Arabidopsis thaliana]
           gi|21555779|gb|AAM63932.1| unknown [Arabidopsis
           thaliana] gi|297328371|gb|EFH58790.1| electron carrier/
           iron ion binding protein [Arabidopsis lyrata subsp.
           lyrata] gi|332641027|gb|AEE74548.1| 2Fe-2S
           ferredoxin-like protein [Arabidopsis thaliana]
          Length = 159

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = +3

Query: 39  KSLITRSSAPTPYERAMASDTIAASKFLARLVRLYAIDRDGEKHAIVGFSGHTLLKALTN 218
           +SLI R+SA +       S ++ + K   R+V+L AID DG K  I+G SG TLL+ALT+
Sbjct: 20  RSLIVRTSATSA-----PSPSLGSKKVSDRIVKLSAIDPDGYKQDIIGLSGQTLLRALTH 74

Query: 219 RRFIDPGSHSLEESDTCSAECEVYIDEEWLEKLPPMSYDESCVLKRNS 362
              IDP SH L++ + CSAECEV I EEWLEKLPP +YDE  VLKR+S
Sbjct: 75  TGLIDPASHRLDDIEACSAECEVQIAEEWLEKLPPRTYDEEYVLKRSS 122


>ref|XP_004148948.1| PREDICTED: adrenodoxin-like protein, mitochondrial-like [Cucumis
           sativus] gi|449522097|ref|XP_004168064.1| PREDICTED:
           adrenodoxin-like protein, mitochondrial-like [Cucumis
           sativus]
          Length = 164

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
 Frame = +3

Query: 39  KSLITR--SSAPTPYERAMASDTIAASKFLARLVRLYAIDRDGEKHAIVGFSGHTLLKAL 212
           K++ +R  +SA T  E + +S    + K   R ++L+A D +G K  IVG +G TLLKAL
Sbjct: 22  KTIFSRWSASATTSLEHSSSS----SKKVSDRTIKLFAYDLEGTKKEIVGLTGQTLLKAL 77

Query: 213 TNRRFIDPGSHSLEESDTCSAECEVYIDEEWLEKLPPMSYDESCVLKRNS 362
            NR  IDP SH LE+ D CSAECEV I ++W+ KLPP SYDE  VLKRNS
Sbjct: 78  ANRGLIDPDSHRLEQIDACSAECEVRIAQDWINKLPPRSYDEEYVLKRNS 127


>ref|XP_003532239.1| PREDICTED: adrenodoxin-like protein, mitochondrial-like [Glycine
           max]
          Length = 158

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/108 (52%), Positives = 70/108 (64%)
 Frame = +3

Query: 39  KSLITRSSAPTPYERAMASDTIAASKFLARLVRLYAIDRDGEKHAIVGFSGHTLLKALTN 218
           KSLI+R+S  +   + +A           R+VRL AID  G+KH +VG +G TLLKAL N
Sbjct: 24  KSLISRTSTSSSSTKKVAD----------RIVRLSAIDFAGKKHEVVGLAGQTLLKALIN 73

Query: 219 RRFIDPGSHSLEESDTCSAECEVYIDEEWLEKLPPMSYDESCVLKRNS 362
              +DP SH LEE D C+A CEV I +EWL+KLPP SYDE  VL RNS
Sbjct: 74  TGLVDPESHRLEEIDACAAHCEVNIAQEWLDKLPPRSYDEEYVLVRNS 121


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