BLASTX nr result

ID: Coptis23_contig00009969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009969
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...   546   e-153
ref|XP_002311513.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153
ref|XP_003531146.1| PREDICTED: putative clathrin assembly protei...   541   e-151
ref|XP_003524854.1| PREDICTED: putative clathrin assembly protei...   541   e-151
ref|XP_002284689.2| PREDICTED: putative clathrin assembly protei...   536   e-150

>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
            gi|223532822|gb|EEF34597.1| clathrin assembly protein,
            putative [Ricinus communis]
          Length = 567

 Score =  546 bits (1407), Expect = e-153
 Identities = 291/472 (61%), Positives = 339/472 (71%), Gaps = 14/472 (2%)
 Frame = -2

Query: 1759 EGDPTFREELLTFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRTLKYD 1580
            EGDPTF+EEL+ FSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR LKYD
Sbjct: 101  EGDPTFKEELVNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYD 160

Query: 1579 TEAERLPKPAQGLEKGYSKTRELDSEEXXXXXXXXXXXLYRLIGCRPEGAAVRNYLIQYA 1400
             EAERLP+P QG +KGYS+TRELDSEE           LYRL+GCRPEGAAV NY+IQYA
Sbjct: 161  IEAERLPRPVQGQDKGYSRTRELDSEELLEQLPALQQLLYRLVGCRPEGAAVGNYVIQYA 220

Query: 1399 LALVLKESFKVYCAINDGIINLVDKFFEMPRHEAVKALEVYRRAGQQAAGLSDFYEVCRG 1220
            LALVLKESFK+YCAINDGIINLVDKFFEMPRHEA+KAL+VY+RAGQQA  LSDFY+VC+G
Sbjct: 221  LALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDVYKRAGQQAGSLSDFYDVCKG 280

Query: 1219 LELARNFQFPDLREPPQSFLTTMEEYIREAPRMVSVXXXXXXXXXXXXLTYKPEEVPSTS 1040
            LELARNFQFP LREPPQSFLTTMEEYIREAPR+V+V            LTY+PEE PS  
Sbjct: 281  LELARNFQFPVLREPPQSFLTTMEEYIREAPRVVTV-----PSEPLLQLTYRPEEGPSEP 335

Query: 1039 DENKPSVSDPTSFSADEIS-SDFELGPPHKNLASQDQPDAGDLLGLHSTAYPD---ATVX 872
            ++ K  + +P S  +++++ ++ E+ PP      Q+  D GDLLGL + A PD   A+  
Sbjct: 336  EDTKLPIDEPESVPSEDVAIANAEVAPPTPPTPPQNNMDTGDLLGL-NYASPDVSAASAI 394

Query: 871  XXXXXXXXXXIP----SNDSHNSSLDQRKELDPSGWELALVTTPSSNISSTNERQLAGGL 704
                      +P    +  + NS   Q K+ DP+GWELALVTTPS+NISS N+RQLAGGL
Sbjct: 395  EERNALALAIVPLEQDAAPTFNSGAGQPKDFDPTGWELALVTTPSANISSVNDRQLAGGL 454

Query: 703  DSLTLSSLYDEGSYRAAQQPVYGRPAPNPFEMQDPFVMSK---PPPSFDIGAM---XXXX 542
            D+LTL+SLYD+ +YRAAQQPVYG PAPNPFE+ DPF MS    PP +  + AM       
Sbjct: 455  DTLTLNSLYDDVAYRAAQQPVYGAPAPNPFEVHDPFAMSNSIAPPSAVQMAAMTQQPPNP 514

Query: 541  XXXXXXXXXXXXXXXPISMGPSNPFGDAGFEPFSVNGAPQPHGTTNPFGGAG 386
                            + M P+NPFGDAGF  F VN    PH + NPFG  G
Sbjct: 515  FGPYQPTYPQPQQQQHLMMSPANPFGDAGFGTFPVNTVTHPH-SNNPFGSTG 565


>ref|XP_002311513.1| predicted protein [Populus trichocarpa] gi|222851333|gb|EEE88880.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  546 bits (1406), Expect = e-153
 Identities = 296/473 (62%), Positives = 335/473 (70%), Gaps = 15/473 (3%)
 Frame = -2

Query: 1759 EGDPTFREELLTFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRTLKYD 1580
            EGDPTFREELL FSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR LKYD
Sbjct: 101  EGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYD 160

Query: 1579 TEAERLPKPAQGLEKGYSKTRELDSEEXXXXXXXXXXXLYRLIGCRPEGAAVRNYLIQYA 1400
             EAERLP+PAQG +KGYS+TR+LDSE+           LYRL+GCRPEGAAV NY+IQYA
Sbjct: 161  IEAERLPRPAQGQDKGYSRTRDLDSEDLLEQLPALQQLLYRLVGCRPEGAAVGNYVIQYA 220

Query: 1399 LALVLKESFKVYCAINDGIINLVDKFFEMPRHEAVKALEVYRRAGQQAAGLSDFYEVCRG 1220
            LALVLKESFK+YCAINDGIINLVDKFFEMPRHEA+KAL++Y+RAGQQA  LSDFY++C+G
Sbjct: 221  LALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDIYKRAGQQAGNLSDFYDICKG 280

Query: 1219 LELARNFQFPDLREPPQSFLTTMEEYIREAPRMVSVXXXXXXXXXXXXLTYKPEEVP--- 1049
            LELARNFQFP LREPPQSFLTTMEEYIREAPR+VSV            LTY+PEE P   
Sbjct: 281  LELARNFQFPVLREPPQSFLTTMEEYIREAPRVVSV-----PSEALLQLTYRPEEGPSED 335

Query: 1048 --STSDENKPSVSDPTSFSADEISSDFELGPPHKNLASQDQPDAGDLLGLHSTAYPDATV 875
              S+ DE +P  SD      D   S+ E+ PP    A Q+  D GDLLGL     P+A+ 
Sbjct: 336  AKSSGDELEPPPSD------DVAVSNVEIAPPVPTTAPQNSIDTGDLLGL-DYGTPNAST 388

Query: 874  XXXXXXXXXXXIPSND----SHNSSLDQRKELDPSGWELALVTTPSSNISSTNERQLAGG 707
                       +PS      + NS   Q K+ DP+GWELALVTTPSSNIS+TNERQLAGG
Sbjct: 389  IEESNALALAIVPSESDVAPTFNSVAGQAKDFDPTGWELALVTTPSSNISATNERQLAGG 448

Query: 706  LDSLTLSSLYDEGSYRAAQQPVYGRPAPNPFEMQDPFVMSK---PPPSFDIGAM---XXX 545
            LDSLTL+SLYDEG+YRAA++PVYG PAPNPFE+QDPF +S     PPS  + AM      
Sbjct: 449  LDSLTLNSLYDEGAYRAARRPVYGAPAPNPFEIQDPFALSNSIAAPPSVQMAAMTQQPHN 508

Query: 544  XXXXXXXXXXXXXXXXPISMGPSNPFGDAGFEPFSVNGAPQPHGTTNPFGGAG 386
                             + M  +NPFGDAGF  F  +    P  T NPFG  G
Sbjct: 509  PFGPYQPTYPQPQHQQNMMMSHANPFGDAGFGAFHAHPMAHPQ-TNNPFGSTG 560


>ref|XP_003531146.1| PREDICTED: putative clathrin assembly protein At2g01600-like isoform
            1 [Glycine max]
          Length = 568

 Score =  541 bits (1395), Expect = e-151
 Identities = 297/475 (62%), Positives = 338/475 (71%), Gaps = 17/475 (3%)
 Frame = -2

Query: 1759 EGDPTFREELLTFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRTLKYD 1580
            EGDPTFREELL FSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR LKYD
Sbjct: 101  EGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYD 160

Query: 1579 TEAERLPKPAQGLEKGYSKTRELDSEEXXXXXXXXXXXLYRLIGCRPEGAAVRNYLIQYA 1400
             EAERLPKP QG EKGYSKTR+LDSEE           LYRL+GCRPEGAAV NY+IQYA
Sbjct: 161  IEAERLPKPVQGQEKGYSKTRDLDSEELLEQLPALQQLLYRLVGCRPEGAAVSNYVIQYA 220

Query: 1399 LALVLKESFKVYCAINDGIINLVDKFFEMPRHEAVKALEVYRRAGQQAAGLSDFYEVCRG 1220
            LALVLKESFK+YCAINDGIINLVDKFFEMPRHEA+KALE Y+RAGQQAA LSDFY+VC+G
Sbjct: 221  LALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEAYKRAGQQAASLSDFYDVCKG 280

Query: 1219 LELARNFQFPDLREPPQSFLTTMEEYIREAPRMVSVXXXXXXXXXXXXLTYKPEEVPSTS 1040
            LELARNFQFP LREPPQSFLTTMEEYI+EAPR+V+V            LTY+PEEV +  
Sbjct: 281  LELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVTV-----PTEPLLQLTYRPEEVLAIE 335

Query: 1039 DENKPSVSD---PTSFSADEISSDFELGPPHKNLASQDQPDAGDLLGLHSTAYPDATVXX 869
            D  KPS  +   P     + + SD E  PP    +S +  + GDLLGL+ TA PDA+   
Sbjct: 336  DA-KPSDEEQEPPVPVDNNVVVSDSEPAPPPPPPSSHNNFETGDLLGLNDTA-PDASSIE 393

Query: 868  XXXXXXXXXIP----SNDSHNSSLDQRKELDPSGWELALVTTPSSNISSTNERQLAGGLD 701
                     +P    +  + N++  Q K+ DP+GWELALV+TPS++IS+ NERQLAGGLD
Sbjct: 394  ERNALALAIVPTETGTTSAFNTTAAQTKDFDPTGWELALVSTPSTDISAANERQLAGGLD 453

Query: 700  SLTLSSLYDEGSYRAAQQPVYGRPAPNPFEMQDPFVMSK---PPPSFDIGAM------XX 548
            SLTL+SLYDE +YR +QQPVYG PAPNPFEMQDPF +S    PPP+  + AM        
Sbjct: 454  SLTLNSLYDEAAYR-SQQPVYGAPAPNPFEMQDPFALSSSIPPPPAVQLAAMQQQANPFG 512

Query: 547  XXXXXXXXXXXXXXXXXPISMGPSNPFGDAGFEPF-SVNGAPQPHGTTNPFGGAG 386
                              + M P+NPFGDAGF  F + N AP P    NPFG  G
Sbjct: 513  PYQQPFQPQPQPQQQQHHMLMNPANPFGDAGFGAFPAPNPAPHPQ-NNNPFGSTG 566


>ref|XP_003524854.1| PREDICTED: putative clathrin assembly protein At2g01600-like isoform
            1 [Glycine max]
          Length = 569

 Score =  541 bits (1395), Expect = e-151
 Identities = 294/475 (61%), Positives = 338/475 (71%), Gaps = 17/475 (3%)
 Frame = -2

Query: 1759 EGDPTFREELLTFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRTLKYD 1580
            EGDPTFREELL FSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR LKYD
Sbjct: 101  EGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYD 160

Query: 1579 TEAERLPKPAQGLEKGYSKTRELDSEEXXXXXXXXXXXLYRLIGCRPEGAAVRNYLIQYA 1400
             EAERLPKPA+G EKG SKTR+LDSEE           LYRL+GCRPEGAAV NY+IQYA
Sbjct: 161  IEAERLPKPAEGQEKGCSKTRDLDSEELLEQLPALQQLLYRLVGCRPEGAAVSNYVIQYA 220

Query: 1399 LALVLKESFKVYCAINDGIINLVDKFFEMPRHEAVKALEVYRRAGQQAAGLSDFYEVCRG 1220
            LALVLKESFK+YCAINDGIINLVDKFFEMPRHEA+KAL+ Y+RAGQQAA LSDFY+VC+G
Sbjct: 221  LALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDAYKRAGQQAASLSDFYDVCKG 280

Query: 1219 LELARNFQFPDLREPPQSFLTTMEEYIREAPRMVSVXXXXXXXXXXXXLTYKPEEVPSTS 1040
            LELARNFQFP LREPPQSFLTTMEEYI+EAPR+V+V            LTY+PEEV +  
Sbjct: 281  LELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVTV-----PTEPLLQLTYRPEEVLAIE 335

Query: 1039 DENKPSVSD---PTSFSADEISSDFELGPPHKNLASQDQPDAGDLLGLHSTAYPDATVXX 869
            D  KPS  +   P     + + SD E  PP    ++ +  + GDLLGL+ TA PDA+   
Sbjct: 336  DA-KPSDEEQEPPVPVDNNVVVSDSESAPPPPPPSAHNNFETGDLLGLNDTA-PDASSIE 393

Query: 868  XXXXXXXXXIP----SNDSHNSSLDQRKELDPSGWELALVTTPSSNISSTNERQLAGGLD 701
                     +P    +  + NS+  Q K+ DP+GWELALV+TPS++IS+ NERQLAGGLD
Sbjct: 394  ERNALALAIVPTETGATSAFNSTASQTKDFDPTGWELALVSTPSTDISAANERQLAGGLD 453

Query: 700  SLTLSSLYDEGSYRAAQQPVYGRPAPNPFEMQDPFVMSK---PPPSFDIGAM------XX 548
            SLTL+SLYDE +YR+AQQPVYG PAPNPFE+QDPF +S    PPP+  + AM        
Sbjct: 454  SLTLNSLYDEAAYRSAQQPVYGAPAPNPFEVQDPFALSSSIPPPPAVQMAAMQQQANPFG 513

Query: 547  XXXXXXXXXXXXXXXXXPISMGPSNPFGDAGFEPFSVNGAPQPH-GTTNPFGGAG 386
                              + M P+NPFGDAGF  F  +  P PH    NPFG  G
Sbjct: 514  SYQQPFQPQPQLQQQQQLMLMNPANPFGDAGFGAFPASN-PVPHPQNNNPFGSTG 567


>ref|XP_002284689.2| PREDICTED: putative clathrin assembly protein At2g01600-like isoform
            1 [Vitis vinifera] gi|297737667|emb|CBI26868.3| unnamed
            protein product [Vitis vinifera]
          Length = 567

 Score =  536 bits (1380), Expect = e-150
 Identities = 293/469 (62%), Positives = 329/469 (70%), Gaps = 14/469 (2%)
 Frame = -2

Query: 1759 EGDPTFREELLTFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRTLKYD 1580
            EGDPTFREELL FSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFR LKYD
Sbjct: 101  EGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYD 160

Query: 1579 TEAERLPKPAQGLEKGYSKTRELDSEEXXXXXXXXXXXLYRLIGCRPEGAAVRNYLIQYA 1400
             EAERLP+PAQG EKGYS+TRELDSEE           L+RLIGCRPEGAA+ NY+IQYA
Sbjct: 161  IEAERLPRPAQGQEKGYSRTRELDSEELLEQLPALQQLLHRLIGCRPEGAAIGNYVIQYA 220

Query: 1399 LALVLKESFKVYCAINDGIINLVDKFFEMPRHEAVKALEVYRRAGQQAAGLSDFYEVCRG 1220
            LALVLKESFK+YCAINDGIINLVDKFFEMPRHEA KALE+Y+RAGQQA  LSDFYEVC+G
Sbjct: 221  LALVLKESFKIYCAINDGIINLVDKFFEMPRHEAFKALEIYKRAGQQAGSLSDFYEVCKG 280

Query: 1219 LELARNFQFPDLREPPQSFLTTMEEYIREAPRMVSVXXXXXXXXXXXXLTYKPEEVPSTS 1040
            LELARNFQFP LREPPQSFL TME+YIREAPRMVSV            LTYK E+ PS S
Sbjct: 281  LELARNFQFPVLREPPQSFLATMEDYIREAPRMVSV-----PNEPLLQLTYKSEDAPSPS 335

Query: 1039 DENK-PSVSDPTSFSADEIS-SDFELGPPHKNLASQDQPDAGDLLGLHSTAYPDATVXXX 866
            ++ K PS  +P    ++ +  S  E+  P   L   +  D GDLLG++  A+ DA+    
Sbjct: 336  EDTKLPSDDEPKLEPSENVEVSSVEVAHPPPPLPPNNLDD-GDLLGINVVAH-DASAIEE 393

Query: 865  XXXXXXXXIPSNDSHNSSLD----QRKELDPSGWELALVTTPSSNISSTNERQLAGGLDS 698
                    +PS  +   + D    Q K+ DP+GWELALVTTPSSNISS NERQLAGGLD+
Sbjct: 394  SNALALAIVPSGSAAAPTFDSGAFQAKDFDPTGWELALVTTPSSNISSANERQLAGGLDT 453

Query: 697  LTLSSLYDEGSYRAAQQPVYGRPAPNPFEMQDPFVMSK---PPPSFDIGAM-----XXXX 542
            LTL+SLYDEG+YRAAQQPVYG PAPNPFE+ DPF +S     PP+  + AM         
Sbjct: 454  LTLTSLYDEGAYRAAQQPVYGAPAPNPFEVHDPFAVSNGVAAPPAVQMAAMAQQQPNPFA 513

Query: 541  XXXXXXXXXXXXXXXPISMGPSNPFGDAGFEPFSVNGAPQPHGTTNPFG 395
                            +  GP NPFGDAGF  F  N         NPFG
Sbjct: 514  PYPTYQQQQQQQQQQHLMFGPPNPFGDAGFGAFPRNTTTAHPQNNNPFG 562


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